Name: Lactobacillus sp. S-24
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6400

Type strain:

Species: Lactobacillus sp.

Strain Designation: S-24

Culture col. no.: DSM 20354, ATCC 27744, IFO 13120, NBRC 13120

Strain history: <- K. Nosiro, S-24

NCBI tax ID(s): 1591 (species)

SI-ID 39152

ATCC 27744, IFO 13120, DSM 20354, LMG 22711, NBRC 13120

Special Collections

DSMZ

Other strains from Lactobacillus sp.

Section

Lactobacillus sp. S-24 is a Gram-positive bacterium that was isolated from spoilt sake.

Gram-positive
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lactobacillus*
	Full Scientific Name (LPSN)	Lactobacillus Beijerinck 1901 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %94.552

[Ref.: #69480]	Motility	no Confidence in %93

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8616]

Culture medium

LACTOBACILLUS MEDIUM II (DSMZ Medium 93)

[Ref.: #8616]

Culture medium growth

[Ref.: #8616]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8616]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8616]			growth	26 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	no Confidence in %91.568
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

[Ref.: #8616]	Murein short key	A11.31
[Ref.: #8616]	Murein types	A4alpha L-Lys-D-Asp

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8616]	Sample type/isolated from	spoilt sake
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Fermented
#Environmental	#Microbial community	-
#Engineered	#Food production	#Beverage

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB680370 (>99% sequence identity) for Lactobacillus acetotolerans subclade from Microbeatlas

Aquatic Samples	1136
Soil Samples	1475
Animal Samples	6619
Plant Samples	398
Total Samples	9628

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Fructilactobacillus fructivorans NBRC 13120 gene for 16S rRNA, partial sequence	AB680370	1495	GenBank ENA	33961 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Lactobacillus acetotolerans NBRC 13120	GCA_001042405	complete	GenBank ENA	1600 tax ID	*
[Ref.: #66792]	Lactobacillus acetotolerans strain NBRC 13120	1600.4	complete	PATRIC	1600 tax ID	*
[Ref.: #66792]	Lactobacillus acetotolerans NBRC 13120	2651869842	complete	JGI IMG/M	1600 tax ID	*

[Ref.: #8616]

GC-content

34.6 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Lactobacillus acetotolerans NBRC 13120 NCBI: GCA_001042405.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus acetotolerans NBRC 13120 NCBI: GCA_001042405.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	94.552	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	65.634	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	96.017	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	91.568	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	93	no

Availability in culture collections External links

[Ref.: #8616]

Culture collection no.

DSM 20354, ATCC 27744, IFO 13120, NBRC 13120

[Ref.: #75873]

SI-ID 39152

References

#8616

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20354

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75873

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39152.1 )

* These data were automatically processed and therefore are not curated

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Lactobacillus acetotolerans NBRC 13120

Lactobacillus acetotolerans NBRC 13120

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