Name: Fusobacterium equinum DSM 17476
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5768

Type strain:

Species: Fusobacterium equinum

Culture col. no.: DSM 17476, CIP 107406, JCM 11174, NCTC 13176, CCUG 50051, VPB 4027, KCTC 15082

Strain history: CIP <- 2002, JCM <- D.N. Love <- VPB: strain 4027

NCBI tax ID(s): 134605 (species)

SI-ID 100653

JCM 11174, NCTC 13176, CIP 107406, CCUG 50051, DSM 17476

Special Collections

Other strains from Fusobacterium equinum

Section

Fusobacterium equinum DSM 17476 is an anaerobe, Gram-negative, rod-shaped animal pathogen that was isolated from horse, purulent paraoral lesion.

Gram-negative
rod-shaped
anaerobe
animal pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Fusobacteriota*
	Class	*Fusobacteriia*
	Order	*Fusobacteriales*
	Family	*Fusobacteriaceae*
	Genus	*Fusobacterium*
	Species	**Fusobacterium equinum**
	Full Scientific Name (LPSN)	Fusobacterium equinum Dorsch et al. 2001

Information on morphological and physiological properties Morphology

[Ref.: #119121]	Gram stain	negative

[Ref.: #119121]	Cell shape	rod-shaped

[Ref.: #119121]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7011]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #7011]

Culture medium growth

[Ref.: #7011]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7011]

Culture medium composition

expand / minimize

[Ref.: #7011]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #7011]

Culture medium growth

[Ref.: #7011]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7011]

Culture medium composition

expand / minimize

[Ref.: #39893]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #39893]

Culture medium growth

[Ref.: #39893]

Culture medium composition

expand / minimize

[Ref.: #119121]

Culture medium

CIP Medium 20

[Ref.: #119121]

Culture medium growth

[Ref.: #119121]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #7011]	growth	37 °C
[Ref.: #39893]	growth	37 °C
[Ref.: #58728]	growth	37 °C
[Ref.: #67770]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7011]	Oxygen tolerance	anaerobe
[Ref.: #58728]	Oxygen tolerance	anaerobe
[Ref.: #119121]	Oxygen tolerance	anaerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #119121]	cellobiose ChEBI	-	degradation
[Ref.: #119121]	D-arabinose ChEBI	-	degradation
[Ref.: #119121]	D-fructose ChEBI	-	degradation
[Ref.: #119121]	D-glucose ChEBI	-	degradation
[Ref.: #119121]	D-xylose ChEBI	-	degradation
[Ref.: #119121]	esculin ChEBI	-	hydrolysis
[Ref.: #119121]	lactose ChEBI	-	degradation
[Ref.: #119121]	maltose ChEBI	-	degradation
[Ref.: #119121]	nitrate ChEBI	-	reduction
[Ref.: #119121]	nitrite ChEBI	-	reduction
[Ref.: #119121]	salicin ChEBI	-	degradation
[Ref.: #119121]	sucrose ChEBI	-	degradation
[Ref.: #119121]	tributyrin ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #119121]		indole ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119121]	amylase	-
[Ref.: #119121]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119121]	caseinase	+	3.4.21.50
[Ref.: #119121]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #119121]	DNase	-
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119121]	gelatinase	-
[Ref.: #119121]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #119121]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119121]	oxidase	-
[Ref.: #119121]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #119121]	tween esterase	-
[Ref.: #119121]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119121]	10329	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7011]	Sample type/isolated from	horse, purulent paraoral lesion
[Ref.: #7011]	Country	Australia
[Ref.: #7011]	Country ISO 3 Code	AUS
[Ref.: #7011]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Horse pus

[Ref.: #119121]	Sample type/isolated from	Animal, Horse, pus
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Equidae (Horse)
#Host Body-Site	#Oral cavity and airways	-
#Host Body-Site	#Other	#Wound
#Host Body Product	#Fluids	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ295750 (>99% sequence identity) for Fusobacterium equinum from Microbeatlas

Aquatic Samples	4
Soil Samples	5
Animal Samples	929
Plant Samples	1
Total Samples	939

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7011]	Pathogenicity (animal)	yes
[Ref.: #7011]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #119121]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7011]	Fusobacterium equorum partial 16S rRNA gene, strain horse	AJ295750	1472	GenBank ENA	134605 tax ID
[Ref.: #20218]	Fusobacterium equinum gene for 16S ribosomal RNA, partial sequence, strain: JCM 11174	AB639144	1469	GenBank ENA	134605 tax ID	*

[Ref.: #7011]	GC-content	29 mol%
[Ref.: #67770]	GC-content	30 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #7011]

Culture collection no.

DSM 17476, CIP 107406, JCM 11174, NCTC 13176, CCUG 50051, VPB 4027, KCTC 15082

[Ref.: #75247]

SI-ID 100653

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fusobacterium equinum sp. nov., from the oral cavity of horses.	Dorsch M, Lovet DN, Bailey GD	Int J Syst Evol Microbiol	10.1099/00207713-51-6-1959	2001	*

References

#7011

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17476

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39893 ; Curators of the CIP;
#58728 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 50051
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75247

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100653.1 )

#119121 Collection of Institut Pasteur ; Curators of the CIP; CIP 107406
* These data were automatically processed and therefore are not curated

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