Name: Fusobacterium canifelinum DSM 15543
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5767

Type strain:

Species: Fusobacterium canifelinum

Culture col. no.: DSM 15543, ATCC BAA-690, RMA 12701

Strain history: <- G. Conrads; RMA 12701 <- RM Alden Res. Lab., Los Angeles <- S. Jang

NCBI tax ID(s): 285729 (species)

SI-ID 201713

ATCC BAA-690, DSM 15543

Special Collections

DSMZ

Other strains from Fusobacterium canifelinum

Section

Fusobacterium canifelinum DSM 15543 is an anaerobe, Gram-negative bacterium that was isolated from cat, from bronchus.

Gram-negative
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Fusobacteriota*
	Class	*Fusobacteriia*
	Order	*Fusobacteriales*
	Family	*Fusobacteriaceae*
	Genus	*Fusobacterium*
	Species	**Fusobacterium canifelinum**
	Full Scientific Name (LPSN)	Fusobacterium canifelinum corrig. Conrads et al. 2004

Synonym

Fusobacterium canium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5992]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #5992]

Culture medium growth

[Ref.: #5992]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5992]

Culture medium composition

expand / minimize

[Ref.: #5992]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5992]

Culture medium growth

[Ref.: #5992]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5992]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5992]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5992]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %91.891

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5992]	Sample type/isolated from	cat, from bronchus
[Ref.: #5992]	Geographic location (country and/or sea, region)	California
[Ref.: #5992]	Country	USA
[Ref.: #5992]	Country ISO 3 Code	USA
[Ref.: #5992]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Felidae (Cat)
#Host Body-Site	#Oral cavity and airways	#Lung

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY162219 (>99% sequence identity) for Fusobacterium from Microbeatlas

Aquatic Samples	197
Soil Samples	65
Animal Samples	11939
Plant Samples	64
Total Samples	12265

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5992]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5992]	Fusobacterium canifelinum strain RMA 12701 16S ribosomal RNA gene, partial sequence	AY162219	1458	GenBank ENA	285729 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Fusobacterium canifelinum strain FDAARGOS_999	285729.6	complete	PATRIC	285729 tax ID	*

[Ref.: #5992]

GC-content

26 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Fusobacterium canifelinum strain FDAARGOS_999 strain Not applicable PATRIC: 285729.6
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	88.408	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	91.891	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	79.847	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.532	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.264	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	84	no

Availability in culture collections External links

[Ref.: #5992]

Culture collection no.

DSM 15543, ATCC BAA-690, RMA 12701

[Ref.: #75246]

SI-ID 201713

References

#5992

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15543

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75246

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID201713.1 )

* These data were automatically processed and therefore are not curated

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Fusobacterium canifelinum strain FDAARGOS_999 strain Not applicable

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Change proposal