Name: Fusobacterium canifelinum DSM 15542
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5766

Type strain:

Species: Fusobacterium canifelinum

Culture col. no.: DSM 15542, ATCC BAA-689, CCUG 49733, RMA 1036, JCM 17464, KCTC 5838

Strain history: KCTC 5838 <-- J. K. Kook <-- CCUG 49733 <-- G. Conrads RMA 1036.

NCBI tax ID(s): 285729 (species)

SI-ID 134421

ATCC BAA-689, DSM 15542, CCUG 49733, JCM 17464

Other strains from Fusobacterium canifelinum

F. canifelinum DSM 15543, ATCC BAA-690, RMA 12701
F. canifelinum CCUG 49734
F. canifelinum CCUG 49735
F. canifelinum CCUG 57078

Section

Fusobacterium canifelinum DSM 15542 is an anaerobe, mesophilic bacterium that was isolated from purulent dog-bite wound in a human patient.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Fusobacteriota*
	Class	*Fusobacteriia*
	Order	*Fusobacteriales*
	Family	*Fusobacteriaceae*
	Genus	*Fusobacterium*
	Species	**Fusobacterium canifelinum**
	Full Scientific Name (LPSN)	Fusobacterium canifelinum corrig. Conrads et al. 2004

Synonym

Fusobacterium canium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5991]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #5991]

Culture medium growth

[Ref.: #5991]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5991]

Culture medium composition

expand / minimize

[Ref.: #5991]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5991]

Culture medium growth

[Ref.: #5991]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5991]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #5991]	growth	37 °C
[Ref.: #58686]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #5991]	Temperature range	mesophilic
[Ref.: #58686]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5991]	Oxygen tolerance	anaerobe
[Ref.: #58686]	Oxygen tolerance	anaerobe

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #58686]

Fatty acid	Percentage	ECL
C14:0	36.7	14
C16:1 ω7c	21.2	15.819
C16:0	12.3	16
C14:0 3OH/C16:1 ISO I	5.8	15.485
C18:2 ω6,9c/C18:0 ANTE	5	17.724
C16:0 3OH	4.7	17.52
C13:0 3OH/C15:1 i I/H	2.2	14.469
C18:1 ω7c /12t/9t	1.8	17.824
C17:1 ω5c ISO	1.8	16.461
C12:0	1.7	12
C18:1 ω9c	1.3	17.769
C16:1 ω7c DMA	1	16.288
C13:1 at 12-13	0.7	12.931
C13:0 ISO 2OH	0.7	13.814
C16:0 aldehyde	0.7	14.949
C16:1 ω5c	0.5	15.908
C15:0	0.5	15
unknown 14.776	0.4	14.776
C14:1 ω5c	0.4	13.899
C18:0	0.4	18
C15:0 ISO	0.2	14.621

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5991]	Sample type/isolated from	purulent dog-bite wound in a human patient
[Ref.: #5991]	Geographic location (country and/or sea, region)	California
[Ref.: #5991]	Country	USA
[Ref.: #5991]	Country ISO 3 Code	USA
[Ref.: #5991]	Continent	North America

[Ref.: #58686]	Sample type/isolated from	Human wound,purulent,dog-bite
[Ref.: #58686]	Sampling date	1977
[Ref.: #58686]	Geographic location (country and/or sea, region)	CA,Santa Monica,Alden Research Lab
[Ref.: #58686]	Country	USA
[Ref.: #58686]	Country ISO 3 Code	USA
[Ref.: #58686]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Purulent dog-bite wound in a human patient
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Other	#Wound
#Host Body Product	#Fluids	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY162221 (>99% sequence identity) for Fusobacterium from Microbeatlas

Aquatic Samples	197
Soil Samples	65
Animal Samples	11939
Plant Samples	64
Total Samples	12265

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5991]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fusobacterium canifelinum gene for 16S ribosomal RNA, partial sequence, strain: JCM 17464	AB616132	1391	ENA	285729 tax ID
[Ref.: #5991]	Fusobacterium canifelinum strain RMA 1036 16S ribosomal RNA gene, partial sequence	AY162221	1458	ENA	285729 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Fusobacterium canifelinum strain FDAARGOS_1126	285729.7	complete	PATRIC	285729 tax ID	*

[Ref.: #5991]	GC-content	26 mol%
[Ref.: #67770]	GC-content	26-28 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Fusobacterium canifelinum strain FDAARGOS_1126 strain Not applicable PATRIC: 285729.7
[Ref.: #69480]	gram-positive	no	92.111	no
[Ref.: #69480]	anaerobic	yes	99.505	yes
[Ref.: #69480]	halophile	no	73.592	no
[Ref.: #69480]	spore-forming	no	88.448	no
[Ref.: #69480]	glucose-util	yes	81.823	no
[Ref.: #69480]	motile	no	91.172	no
[Ref.: #69480]	flagellated	no	94.995	no
[Ref.: #69480]	aerobic	no	98.743	no
[Ref.: #69480]	thermophile	no	99.266	yes
[Ref.: #69480]	glucose-ferment	yes	59.804	no

Availability in culture collections External links

[Ref.: #5991]

Culture collection no.

DSM 15542, ATCC BAA-689, CCUG 49733, RMA 1036, JCM 17464, KCTC 5838

[Ref.: #75245]

SI-ID 134421

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fusobacterium canifelinum sp. nov., from the oral cavity of cats and dogs.	Conrads G, Citron DM, Mutters R, Jang S, Goldstein EJ	Syst Appl Microbiol	10.1078/0723202041438509	2004	*

References

#5991

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15542

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#58686 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49733

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75245

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID134421.1 )

* These data were automatically processed and therefore are not curated

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Fusobacterium canifelinum strain FDAARGOS_1126 strain Not applicable

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