Francisella noatunensis 2005/50/F292-6C is a psychrophilic animal pathogen that was isolated from farmed atlantic cod Gadus morhua with granulomatous disease.
psychrophilic animal pathogen 16S sequence| @ref 20215 |
Last LPSN update
2025-12-16 09:48:08 |
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Beggiatoales |
| Family Francisellaceae |
| Genus Francisella |
| Species Francisella noatunensis |
| Full scientific name Francisella noatunensis (Mikalsen et al. 2007) Ottem et al. 2009 |
| Synonyms (2) |
| BacDive ID | Other strains from Francisella noatunensis (1) | Type strain |
|---|---|---|
| 5749 | F. noatunensis GM2212, DSM 18777, CNCM I-3481, CNCM I-3511, ... |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17296 | COLUMBIA-GLUCOSE-CYSTEINE-AGAR (DSMZ Medium 429c) | Medium recipe at MediaDive  | Name: COLUMBIA-GLUCOSE-CYSTEINE-AGAR (DSMZ Medium 429c) Composition: Horse blood 40.0 g/l Sheep blood 40.0 g/l Glucose 10.0 g/l Cysteine 1.0 g/l Columbia agar base |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 17296 | positive | growth | 20 | psychrophilic |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Food production | #Aquaculture | |
| #Environmental | #Aquatic | - | |
| #Infection | #Inflammation | - | |
| #Host | #Fishes | - |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 17296 | farmed atlantic cod Gadus morhua with granulomatous disease | Gadus morhua | Hordaland | Norway | NOR | Europe |
Global distribution of 16S sequence DQ295795 (>99% sequence identity) for Francisella from Microbeatlas 
 Aquatic Samples |
6973 |
 Soil Samples |
181 |
 Animal Samples |
762 |
 Plant Samples |
39 |
| Total Samples | 7955 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 17296 | Francisella sp. 2005/50/F292-6C 16S ribosomal RNA gene, partial sequence | DQ295795 | 1416 |   | 360196 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Reorganized Genomic Taxonomy of Francisellaceae Enables Design of Robust Environmental PCR Assays for Detection of Francisella tularensis. | Ohrman C, Sahl JW, Sjodin A, Uneklint I, Ballard R, Karlsson L, McDonough RF, Sundell D, Soria K, Backman S, Chase K, Brindefalk B, Sozhamannan S, Vallesi A, Hagglund E, Ramirez-Paredes JG, Thelaus J, Colquhoun D, Myrtennas K, Birdsell D, Johansson A, Wagner DM, Forsman M. | Microorganisms | 10.3390/microorganisms9010146 | 2021 |  |
| Larva of greater wax moth Galleria mellonella is a suitable alternative host for the fish pathogen Francisella noatunensis subsp. orientalis. | Djainal WAS, Shahin K, Metselaar M, Adams A, Desbois AP. | BMC Microbiol | 10.1186/s12866-020-1695-0 | 2020 | | |
| Enzymology | Development of a recombinase polymerase amplification assay for rapid detection of Francisella noatunensis subsp. orientalis. | Shahin K, Gustavo Ramirez-Paredes J, Harold G, Lopez-Jimena B, Adams A, Weidmann M. | PLoS One | 10.1371/journal.pone.0192979 | 2018 | |
| Multiple specialised goose-type lysozymes potentially compensate for an exceptional lack of chicken-type lysozymes in Atlantic cod. | Seppola M, Bakkemo KR, Mikkelsen H, Myrnes B, Helland R, Irwin DM, Nilsen IW. | Sci Rep | 10.1038/srep28318 | 2016 | | |
| Monitoring the survival of fish-pathogenic Francisella in water microcosms. | Duodu S, Colquhoun D | FEMS Microbiol Ecol | 10.1111/j.1574-6941.2010.00973.x | 2010 | | |
| Phylogeny | Francisella halioticida sp. nov., a pathogen of farmed giant abalone (Haliotis gigantea) in Japan. | Brevik OJ, Ottem KF, Kamaishi T, Watanabe K, Nylund A | J Appl Microbiol | 10.1111/j.1365-2672.2011.05133.x | 2011 | |
| Phylogeny | Francisella asiatica sp. nov. isolated from farmed tilapia (Oreochromis sp.) and elevation of Francisella philomiragia subsp. noatunensis to species rank as Francisella noatunensis comb. nov., sp. nov. | Mikalsen J, Colquhoun DJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.002139-0 | 2009 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive5750.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
License