Name: Chryseobacterium balustinum La 724
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5670

Type strain:

Species: Chryseobacterium balustinum

Strain Designation: La 724

Culture col. no.: DSM 16775, ATCC 33487, CIP 103103, LMG 8329, NBRC 15053, NCTC 11212, CCUG 13228, JCM 1278, BCRC 17332, BCRC 17361, CCM 4450, CCTM 724, IAM 14209, IFO 15053, JCM 21074, LMG 4010, NCIMB 2270

Strain history: CIP <- 1988, NCTC, Flavobacterium balustinum <- V. Bonifas, Lausanne, Switzerland: strain La 724 <- 1959, C. Tysset

NCBI tax ID(s): 1349755 (strain), 246 (species)

SI-ID 2813

LMG 4010, ATCC 33487, CCUG 13228, LMG 8329, NCTC 11212, IFO 15053, CIP 103103, NCIMB 2270, CCM 4450, IAM 14209, KCTC 2903, NBRC 15053, BCRC 17332, CCRC 17332, BCRC 17361, CCRC 17361, DSM 16775, JCM 21074

Special Collections

Other strains from Chryseobacterium balustinum

Section

Chryseobacterium balustinum La 724 is an obligate aerobe, Gram-negative bacterium that was isolated from Fish blood.

Gram-negative
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Species	**Chryseobacterium balustinum**
	Full Scientific Name (LPSN)	Chryseobacterium balustinum (Harrison 1929) Vandamme et al. 1994

Synonym

Flavobacterium balustinum

Information on morphological and physiological properties Morphology

[Ref.: #116725]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.955

[Ref.: #116725]	Cell shape	rod-shaped

[Ref.: #116725]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %90

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6578]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #6578]

Culture medium growth

[Ref.: #6578]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6578]

Culture medium composition

expand / minimize

[Ref.: #34913]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #34913]

Culture medium growth

[Ref.: #34913]

Culture medium composition

expand / minimize

[Ref.: #116725]

Culture medium

CIP Medium 3

[Ref.: #116725]

Culture medium growth

[Ref.: #116725]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #6578]		growth	30 °C
[Ref.: #34913]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #116725]		growth	30 °C
[Ref.: #116725]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116725]

Oxygen tolerance

obligate aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116725]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116725]	nitrate ChEBI	+	reduction
[Ref.: #116725]	nitrite ChEBI	+	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116725]	tributyrin ChEBI	-	hydrolysis
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #116725]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #116725]		indole ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #116725]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #116725]	beta-galactosidase	-	3.2.1.23
[Ref.: #116725]	catalase	+	1.11.1.6
[Ref.: #116725]	gelatinase	-
[Ref.: #116725]	lysine decarboxylase	-	4.1.1.18
[Ref.: #116725]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116725]	oxidase	+
[Ref.: #116725]	tryptophan deaminase	-
[Ref.: #116725]	urease	-	3.5.1.5

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #116725]	9168	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	+	+/-	+	-	+	+/-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116725]	334	not determinedn.d.	+	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #45919]	Sample type/isolated from	Fish blood
[Ref.: #45919]	Geographic location (country and/or sea, region)	River Dordogne
[Ref.: #45919]	Country	France
[Ref.: #45919]	Country ISO 3 Code	FRA
[Ref.: #45919]	Continent	Europe

[Ref.: #6578]	Sample type/isolated from	fish, blood
[Ref.: #6578]	Geographic location (country and/or sea, region)	Lausanne
[Ref.: #6578]	Country	Switzerland
[Ref.: #6578]	Country ISO 3 Code	CHE
[Ref.: #6578]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Heart blood of fish

[Ref.: #116725]	Sample type/isolated from	Animal, Fish, blood
[Ref.: #116725]	Geographic location (country and/or sea, region)	Lausanne
[Ref.: #116725]	Country	Switzerland
[Ref.: #116725]	Country ISO 3 Code	CHE
[Ref.: #116725]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Fishes	-
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC050177 (>99% sequence identity) for Chryseobacterium from Microbeatlas

Aquatic Samples	174
Soil Samples	131
Animal Samples	665
Plant Samples	264
Total Samples	1234

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6578]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116725]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6578]	Chryseobacterium balustinum strain LMG 8329 16S ribosomal RNA gene, partial sequence	AY468447	1310	GenBank ENA	246 tax ID
[Ref.: #67770]	Chryseobacterium balustinum gene for 16S ribosomal RNA, partial cds, strain: JCM 1278	LC050177	1439	GenBank ENA	246 tax ID
[Ref.: #20218]	Chryseobacterium balustinum gene for 16S rRNA, partial sequence, strain: NBRC 15053	AB680758	1442	GenBank ENA	246 tax ID	*
[Ref.: #124043]	Flavobacterium balustinum 16S ribosomal RNA.	D14016	1259	GenBank ENA	246 tax ID	*
[Ref.: #20218]	Chryseobacterium balustinum 16S ribosomal RNA gene, partial sequence	M58771	1467	GenBank ENA	246 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chryseobacterium balustinum DSM 16775	GCA_900168205	contig	GenBank ENA	246 tax ID
[Ref.: #67770]	Chryseobacterium balustinum NCTC11212	GCA_900446785	contig	GenBank ENA	246 tax ID
[Ref.: #66792]	Chryseobacterium balustinum strain DSM 16775	246.6	wgs	PATRIC	246 tax ID	*
[Ref.: #66792]	Chryseobacterium balustinum strain NCTC11212	246.10	wgs	PATRIC	246 tax ID	*
[Ref.: #66792]	Chryseobacterium balustinum NCTC 11212	2808606673	draft	JGI IMG/M	246 tax ID	*
[Ref.: #66792]	Chryseobacterium balustinum DSM 16775	2681813564	draft	JGI IMG/M	246 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Chryseobacterium balustinum strain DSM 16775 PATRIC: 246.6
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.955	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.535	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	87.683	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	84.348	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.624	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90	no

Availability in culture collections External links

[Ref.: #6578]

Culture collection no.

DSM 16775, ATCC 33487, CIP 103103, LMG 8329, NBRC 15053, NCTC 11212, CCUG 13228, JCM 1278, BCRC 17332, BCRC 17361, CCM 4450, CCTM 724, IAM 14209, IFO 15053, JCM 21074, LMG 4010, NCIMB 2270

[Ref.: #75152]

SI-ID 2813

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Soonwooa buanensis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from seawater.	Joung Y, Song J, Lee K, Oh HM, Joh K, Cho JC	Int J Syst Evol Microbiol	10.1099/ijs.0.017707-0	2009	*
Phylogeny	Kaistella koreensis gen. nov., sp. nov., a novel member of the Chryseobacterium-Bergeyella-Riemerella branch.	Kim MK, Im WT, Shin YK, Lim JH, Kim SH, Lee BC, Park MY, Lee KY, Lee ST	Int J Syst Evol Microbiol	10.1099/ijs.0.02998-0	2004	*
Phylogeny	Genomic insight into Chryseobacterium turcicum sp. nov. and Chryseobacterium muglaense sp. nov. isolated from farmed rainbow trout in Turkey.	Saticioglu IB, Ay H, Altun S, Duman M	Syst Appl Microbiol	10.1016/j.syapm.2022.126385	2022	*

References

#6578

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16775

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34913 ; Curators of the CIP;
#45919 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 13228

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75152

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID2813.1 )

#116725 Collection of Institut Pasteur ; Curators of the CIP; CIP 103103

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Chryseobacterium balustinum strain DSM 16775

Change proposal

Change proposal