Name: Cronobacter dublinensis CFS237
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5239

Type strain:

Species: Cronobacter dublinensis

Strain Designation: CFS237

Culture col. no.: CCUG 55851, DSM 18705, LMG 23823, DES 187, JCM 16467

Strain history: LMG 23823 <-- A. Lehner DES187 <-- C. Iversen <-- N. Mullane.

NCBI tax ID(s): 1159554 (strain), 413497 (species)

SI-ID 354304

DSM 18705, LMG 23823, JCM 16467

Special Collections

Cronobacter phage vB_CduM-PT-JD06

Other strains from Cronobacter dublinensis

Section

Cronobacter dublinensis CFS237 is a facultative anaerobe, Gram-negative, motile bacterium that was isolated from milk powder production facility.

Gram-negative
motile
rod-shaped
facultative anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Cronobacter*
	Species	**Cronobacter dublinensis**
	Full Scientific Name (LPSN)	Cronobacter dublinensis Iversen et al. 2008

Synonym

"Cronobacter dublinensis"

Information on morphological and physiological properties Morphology

[Ref.: #32494]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.5

[Ref.: #32494]	Cell length	3 µm

[Ref.: #32494]	Cell width	1 µm

[Ref.: #32494]	Cell shape	rod-shaped

[Ref.: #32494]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7666]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #7666]

Culture medium growth

[Ref.: #7666]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7666]

Culture medium composition

expand / minimize

[Ref.: #7666]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #7666]

Culture medium growth

[Ref.: #7666]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7666]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7666]	growth	37 °C
[Ref.: #32494]	growth	06-45 °C
[Ref.: #60756]	growth	30 °C
[Ref.: #67770]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #32494]			growth	05-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32494]	Oxygen tolerance	facultative anaerobe
[Ref.: #60756]	Oxygen tolerance	aerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32494]		NaCl		growth	<7	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #32494]	esculin ChEBI	+	hydrolysis
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #32494]	malonate ChEBI	+	carbon source
[Ref.: #68368]	melibiose ChEBI	+	fermentation	* from API 20E
[Ref.: #32494]	myo-inositol ChEBI	+	carbon source
[Ref.: #68368]	myo-inositol ChEBI	+	fermentation	* from API 20E
[Ref.: #32494]	nitrate ChEBI	+	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #32494]	putrescine ChEBI	+	carbon source
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	+	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #32494]	indole ChEBI	yes
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	yes	* from API 20E

	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #32494]	indole ChEBI		+
[Ref.: #68368]	acetoin ChEBI	+		* from API 20E
[Ref.: #68368]	indole ChEBI		+	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #32494]	catalase	+	1.11.1.6
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #7666]	17938	+	+	-	+	+	-	-	-	+	+	+	+	+	+	-	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #7666]	16611	+	+	-	+	+	-	-	-	+	+	+	+	+	+	-	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7666]	Sample type/isolated from	milk powder production facility
[Ref.: #7666]	Geographic location (country and/or sea, region)	Dublin
[Ref.: #7666]	Country	Ireland
[Ref.: #7666]	Country ISO 3 Code	IRL
[Ref.: #7666]	Continent	Europe

[Ref.: #60756]	Sample type/isolated from	Milk powder production facility
[Ref.: #60756]	Geographic location (country and/or sea, region)	Dublin
[Ref.: #60756]	Country	Ireland
[Ref.: #60756]	Country ISO 3 Code	IRL
[Ref.: #60756]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Milk powder manufacturing facility
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Dairy product
#Engineered	#Industrial	#Plant (Factory)
#Host Body Product	#Fluids	#Milk

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EF059892 (>99% sequence identity) for Cronobacter from Microbeatlas

Aquatic Samples	2553
Soil Samples	1166
Animal Samples	20787
Plant Samples	2029
Total Samples	26535

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7666]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7666]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence	EF059892	1361	GenBank ENA	1159554 tax ID
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059819	1487	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059820	1487	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059821	1421	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059822	1461	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059823	1472	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059824	1419	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059825	1472	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059826	1423	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059827	1486	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059828	1470	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059829	1486	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059830	1420	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059831	1487	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059832	1462	GenBank ENA	413504 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059833	1420	GenBank ENA	550 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059834	1378	GenBank ENA	413505 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059835	1479	GenBank ENA	435910 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059836	1419	GenBank ENA	413507 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059837	1423	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059839	1380	GenBank ENA	413497 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059840	1423	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059842	1377	GenBank ENA	61645 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059844	1415	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059846	1497	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059847	1422	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059848	1425	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059849	1422	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059850	1496	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059851	1418	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059852	1419	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059853	1464	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059854	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059855	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059856	1506	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059857	1416	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059859	1420	GenBank ENA	550 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059860	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059861	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059862	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059863	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059864	1423	GenBank ENA	413502 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059865	1416	GenBank ENA	550 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059866	1422	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059867	1489	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059868	1420	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059869	1421	GenBank ENA	565 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059870	1421	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059871	1421	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059872	1507	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059873	1418	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059874	1418	GenBank ENA	413497 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059875	1425	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059876	1420	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059878	1423	GenBank ENA	413497 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059879	1421	GenBank ENA	413497 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059880	1419	GenBank ENA	545 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059882	1422	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059883	1422	GenBank ENA	28141 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059884	1419	GenBank ENA	81476 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059885	1419	GenBank ENA	61645 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059886	1369	GenBank ENA	61645 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059887	1423	GenBank ENA	413501 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059888	1419	GenBank ENA	158836 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059889	1418	GenBank ENA	565 tax ID	*
[Ref.: #124043]	Cronobacter dublinensis subsp. dublinensis LMG 23823 strain DES187 16S ribosomal RNA gene, partial sequence.	EF059890	1448	GenBank ENA	158836 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cronobacter dublinensis subsp. dublinensis LMG 23823	GCA_000409225	contig	GenBank ENA	1159554 tax ID
[Ref.: #66792]	Cronobacter dublinensis subsp. dublinensis LMG 23823	GCA_001277235	complete	GenBank ENA	1159554 tax ID	*
[Ref.: #66792]	Cronobacter dublinensis subsp. dublinensis LMG 23823	1159554.4	wgs	PATRIC	1159554 tax ID	*
[Ref.: #66792]	Cronobacter dublinensis subsp. dublinensis LMG 23823	1159554.10	plasmid	PATRIC	1159554 tax ID	*
[Ref.: #66792]	Cronobacter dublinensis subsp. dublinensis LMG 23823	1159554.7	complete	PATRIC	1159554 tax ID	*
[Ref.: #66792]	Cronobacter dublinensis dublinensis LMG 23823	2663762850	complete	JGI IMG/M	1159554 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Cronobacter dublinensis subsp. dublinensis LMG 23823 LMG 23823 NCBI: GCA_001277235.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cronobacter dublinensis subsp. dublinensis LMG 23823 LMG 23823 NCBI: GCA_001277235.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	99.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	94.866	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	63.443	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.804	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	99.8	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	74.729	no

Availability in culture collections External links

[Ref.: #7666]

Culture collection no.

CCUG 55851, DSM 18705, LMG 23823, DES 187, JCM 16467

[Ref.: #74730]

SI-ID 354304


[Ref.: #124042]	Cronobacter phage vB_CduM-PT-JD06

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Cronobacter condimenti sp. nov., isolated from spiced meat, and Cronobacter universalis sp. nov., a species designation for Cronobacter sp. genomospecies 1, recovered from a leg infection, water and food ingredients.	Joseph S, Cetinkaya E, Drahovska H, Levican A, Figueras MJ, Forsythe SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.032292-0	2011	*
Phylogeny	Cronobacter gen. nov., a new genus to accommodate the biogroups of Enterobacter sakazakii, and proposal of Cronobacter sakazakii gen. nov., comb. nov., Cronobacter malonaticus sp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov., Cronobacter genomospecies 1, and of three subspecies, Cronobacter dublinensis subsp. dublinensis subsp. nov., Cronobacter dublinensis subsp. lausannensis subsp. nov. and Cronobacter dublinensis subsp. lactaridi subsp. nov.	Iversen C, Mullane N, McCardell B, Tall BD, Lehner A, Fanning S, Stephan R, Joosten H	Int J Syst Evol Microbiol	10.1099/ijs.0.65577-0	2008	*

References

#7666

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18705

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32494

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28714 (see below)

#60756 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55851

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74730

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID354304.1 )

#124042

Dr. Johannes Wittmann, Dr. Clara Rolland, Dr. Lorenz Reimer, Joaquim Sardà: PhageDive .

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#28714

IJSEM 1442 2008 ( DOI 10.1099/ijs.0.65577-0 , PubMed 18523192 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Cronobacter dublinensis subsp. dublinensis in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Cronobacter dublinensis subsp. dublinensis LMG 23823 LMG 23823

Cronobacter dublinensis subsp. dublinensis LMG 23823 LMG 23823

Change proposal

Change proposal