Clostridium baratii (DSM 601, ATCC 27638, VPI 4443)

Name: Clostridium baratii (DSM 601, ATCC 27638, VPI 4443)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2544

Type strain

Strain Designation 2227, 10023

Culture col. no. DSM 601 ATCC 27638 VPI 4443 CCUG 24033 CIP 104306 5 more

NCBI tax ID(s) 1561

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- S. Nakamura, 2227 (C. paraperfringens) <- Inst. Pasteur, Paris, 2227 (Inflabilis barati) JCM <-- ATCC 27638 <-- S. Nakamura 2227 <-- Inst. Pasteur, Paris; 2227. CIP <- 1994, J.P. Carlier, Inst. Pasteur, Paris, France: strain 10023 <- ATCC <- S. Nakamura: strain 2227, Clostridium paraperfringens <- Inst. Pasteur, Paris, France, Inflabis barati

Links

Clostridium baratii 2227 is an anaerobe bacterium that was isolated from canine renal epithelioma.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 39101

ATCC 27638,CIP 104306,CCUG 24033,DSM 601,JCM 1385,CCRC 14541,BCRC 14541,KCTC 5131

@ref 20215

Last LPSN update 2026-05-29 08:25:29

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium baratii

Full scientific name Clostridium baratii corrig. (Prévot 1938) Holdeman and Moore 1970 (Approved Lists 1980)

Synonyms (5)

Clostridium perenne
"Inflabilis barati"
Clostridium barati
"Acuformis perennis"
Clostridium paraperfringens

BacDive ID	Other strains from **Clostridium baratii** (3)	Type strain
2545	C. baratii G (KZ), DSM 602, ATCC 27639, NCTC 10986, ...
2546	C. baratii 1116D, Prévot, 1116D, Prévot, DSM 1401, ...
163981	C. baratii JCM 31253

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
313	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
313	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)	Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Distilled water
41364	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
116731	CIP Medium 20	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
313	positive	growth	37
41364	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

313

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68367	17057 ChEBI	cellobiose	+	builds acid from	from API 20A
68367	17634 ChEBI	D-glucose	+	builds acid from	from API 20A
68367	16899 ChEBI	D-mannitol	-	builds acid from	from API 20A
68367	16024 ChEBI	D-mannose	+	builds acid from	from API 20A
68367	65327 ChEBI	D-xylose	+	builds acid from	from API 20A
68367	4853 ChEBI	esculin	+	hydrolysis	from API 20A
68367	5291 ChEBI	gelatin	-	hydrolysis	from API 20A
68367	17754 ChEBI	glycerol	+	builds acid from	from API 20A
68367	30849 ChEBI	L-arabinose	-	builds acid from	from API 20A
68367	62345 ChEBI	L-rhamnose	-	builds acid from	from API 20A
68367	17716 ChEBI	lactose	+	builds acid from	from API 20A
68367	17306 ChEBI	maltose	+	builds acid from	from API 20A
68367	16634 ChEBI	raffinose	-	builds acid from	from API 20A
68367	17814 ChEBI	salicin	+	builds acid from	from API 20A
68367	30911 ChEBI	sorbitol	-	builds acid from	from API 20A
68367	17992 ChEBI	sucrose	+	builds acid from	from API 20A
68367	27082 ChEBI	trehalose	-	builds acid from	from API 20A
68367	27897 ChEBI	tryptophan	-	energy source	from API 20A
68367	16199 ChEBI	urea	-	hydrolysis	from API 20A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68367	35581 ChEBI	indole		from API 20A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68367	35581 ChEBI	indole	-	from API 20A

Enzymes

@ref	Value	Activity	Ec
68367	beta-glucosidase	+	3.2.1.21	from API 20A
68367	gelatinase	-		from API 20A
68367	urease	-	3.5.1.5	from API 20A

API 20A

@ref	IND	URE	GLU	MAN	LAC	SAC	MAL	SAL	XYL	ARA	GEL	ESC	GLY	CEL	MNE	MLZ	RAF	SOR	RHA	TRE	CAT	Spores presentSPOR	GramGRAM	Morphology coccus="+" rod="-"COCC
313	-	-	+	-	+	+	+	+	+	-	-	+	+	+	+	+/-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Urogenital tract	#Kidney

Isolation

@ref	Sample type
313	canine renal epithelioma
47905	Canine renal epithelioma
67770	Hog liver
116731	Animal, Canine, renal epithelioma

Taxonmaps

69479

Global distribution of 16S sequence LC036313 (>99% sequence identity) for Clostridium baratii from Microbeatlas

Aquatic Samples	927
Soil Samples	585
Animal Samples	10123
Plant Samples	218
Total Samples	11853

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
313	2	Risk group (German classification) According to TRBA 466
116731	2	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
313	C.barati (ATCC27638) rrn gene for 16S rRNA	X68174	1515		1561
67770	Clostridium baratii gene for 16S ribosomal RNA, partial sequence, strain: JCM 1385	LC036313	1454		1561

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Multiplex PCR for detection of botulinum neurotoxin-producing clostridia in clinical, food, and environmental samples.	De Medici D, Anniballi F, Wyatt GM, Lindstrom M, Messelhausser U, Aldus CF, Delibato E, Korkeala H, Peck MW, Fenicia L.	Appl Environ Microbiol	10.1128/aem.00805-09	2009
	Genetic confirmation of identities of neurotoxigenic Clostridium baratii and Clostridium butyricum implicated as agents of infant botulism.	Suen JC, Hatheway CL, Steigerwalt AG, Brenner DJ.	J Clin Microbiol	10.1128/jcm.26.10.2191-2192.1988	1988
	Cloning, nucleotide sequence, and expression of the gene encoding the bacteriocin boticin B from Clostridium botulinum strain 213B.	Dineen SS, Bradshaw M, Johnson EA.	Appl Environ Microbiol	10.1128/aem.66.12.5480-5483.2000	2000
Enzymology	Identification of Clostridium botulinum, Clostridium argentinense, and related organisms by cellular fatty acid analysis.	Ghanem FM, Ridpath AC, Moore WE, Moore LV.	J Clin Microbiol	10.1128/jcm.29.6.1114-1124.1991	1991

References

#313	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 601
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#41364	; Curators of the CIP;
#47905	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 24033
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68367	Automatically annotated from API 20A .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116731	Collection of Institut Pasteur ; Curators of the CIP; CIP 104306
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium baratii (DSM 601, ATCC 27638, VPI 4443)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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