Actinopolyspora xinjiangensis (DSM 46732, CCTCC AA 209080, KCTC 19656)

Name: Actinopolyspora xinjiangensis (DSM 46732, CCTCC AA 209080, KCTC 19656)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24727

Type strain

Culture col. no. DSM 46732 CCTCC AA 209080 KCTC 19656 TRM 40136 JCM 31478

NCBI tax ID(s) 405564

Special Collections DSMZ JCM KCTC

Links

Actinopolyspora xinjiangensis DSM 46732 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from hypersaline habitat.

Gram-positive aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 403601

KCTC 19656,DSM 46732

@ref 20215

Last LPSN update 2025-12-16 09:52:55

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Actinopolyspora

Species Actinopolyspora xinjiangensis

Full scientific name Actinopolyspora xinjiangensis Guan et al. 2011

Morphology

Cell morphology

@ref	Gram stain
67771	positive
125438
125438	positive
125439	positive

Multimedia

@ref:	20249
multimedia content:	DSM_46732.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_46732.jpg
caption:	Medium 1504 37°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20249	CM-MEDIUM (DSMZ Medium 1504)		Medium recipe at MediaDive	Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water
20249	GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20249	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic
67771	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

67771

Oxygen toleranceaerobe

Observation

67770

Observationquinones: MK-6, MK-10(H₄), MK-7, MK-9(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Condition	#Saline

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20249	hypersaline habitat	Xinjiang Province	China	CHN	Asia
67770	Soil from the Lop Nur salt lake	Xinjiang Province, north-west China	China	CHN	Asia
67771	From saline soil		China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20249	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2619619031 annotated assembly for Actinopolyspora xinjiangensis DSM 46732	scaffold	GCA_900104475	405564.4	2619619031	405564	68.7

Genome browser: GCA_900104475

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20249	Actinopolyspora xinjiangensis strain TRM 40136 16S ribosomal RNA gene, partial sequence	GU479394	1411		405564

GC content

@ref	GC-content (mol%)
20249	68.9
67770	68.9

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinopolyspora xinjiangensis DSM 46732
NCBI: GCA_900104475

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	50.80	no
125439	motility	BacteriaNetⓘ	no	74.70	no
125439	gram_stain	BacteriaNetⓘ	positive	95.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	70.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinopolyspora xinjiangensis strain DSM 46732
PATRIC: 405564.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.93	yes
125438	anaerobic	anaerobicⓘ	no	96.87	yes
125438	spore-forming	spore-formingⓘ	yes	77.36	no
125438	aerobic	aerobicⓘ	yes	88.71	yes
125438	thermophilic	thermophileⓘ	no	89.76	yes
125438	flagellated	motile2+ⓘ	no	91.59	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Isolation and diversity of sediment bacteria in the hypersaline aiding lake, China.	Guan TW, Lin YJ, Ou MY, Chen KB.	PLoS One	10.1371/journal.pone.0236006	2020
	Cultivation-independent methods applied to the microbial prospection of oil and gas in soil from a sedimentary basin in Brazil.	Miqueletto PB, Andreote FD, Dias AC, Ferreira JC, Dos Santos Neto EV, de Oliveira VM.	AMB Express	10.1186/2191-0855-1-35	2011
Phylogeny	Actinopolyspora salinaria sp. nov., a halophilic actinomycete isolated from solar saltern soil.	Duangmal K, Suksaard P, Pathom-Aree W, Mingma R, Matsumoto A, Takahashi Y.	Int J Syst Evol Microbiol	10.1099/ijsem.0.000926	2016
Phylogeny	Actinopolyspora lacussalsi sp. nov., an extremely halophilic actinomycete isolated from a salt lake.	Guan TW, Wei B, Zhang Y, Xia ZF, Che ZM, Chen XG, Zhang LL.	Int J Syst Evol Microbiol	10.1099/ijs.0.047167-0	2013
Phylogeny	Actinopolyspora righensis sp. nov., a novel halophilic actinomycete isolated from Saharan soil in Algeria.	Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou N	Antonie Van Leeuwenhoek	10.1007/s10482-013-9948-7	2013
Phylogeny	Actinopolyspora xinjiangensis sp. nov., a novel exteremely halophilic actinomycete isolated from a salt lake in Xinjiang, China.	Guan TW, Liu Y, Zhao K, Xia ZF, Zhang XP, Zhang LL	Antonie Van Leeuwenhoek	10.1007/s10482-010-9458-9	2010

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20249	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46732
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Actinopolyspora xinjiangensis (DSM 46732, CCTCC AA 209080, KCTC 19656)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900104475

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media