Rothia endophytica DSM 26247 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from surface-sterilized healthy root of Dysophylla stellata Benth..
Gram-positive ovoid-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
Last LPSN update
2025-12-16 09:52:48 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Micrococcaceae |
| Genus Rothia |
| Species Rothia endophytica |
| Full scientific name Rothia endophytica Xiong et al. 2013 |
| BacDive ID | Other strains from Rothia endophytica (1) | Type strain |
|---|---|---|
| 158162 | R. endophytica TURIN130318_T4, DSM 107244 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 20785 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive  | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM3954388v1 assembly for Rothia endophytica JCM 18541 | scaffold | GCA_039543885   | 1324766 | 52.69 |  |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20785 | Rothia endophytica strain YIM 67072 16S ribosomal RNA gene, partial sequence | KC806052 | 1520 |  | 1324766 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Diversity of rhizospheric and endophytic bacteria isolated from dried fruit of Ficus carica. | Abid L, Smiri M, Federici E, Lievens B, Manai M, Yan Y, Sadfi-Zouaoui N. | Saudi J Biol Sci | 10.1016/j.sjbs.2022.103398 | 2022 | | |
| The Effectiveness of Co-Inoculation by Consortia of Microorganisms Depends on the Type of Plant and the Soil Microbiome. | Sokolova EA, Mishukova OV, Hlistun IV, Tromenschleger IN, Tikunov AY, Manakhov AD, Rogaev EI, Savenkov OA, Buyanova MD, Ivanov IV, Smirnova NV, Voronina EN. | Plants (Basel) | 10.3390/plants13010116 | 2023 | | |
| Bacterial Diversity and Antimicrobial Resistance of Microorganisms Isolated from Teat Cup Liners in Dairy Farms in Shandong Province, China. | Yan G, Wang S, Cui Y, Xue K, Liu Y, Liu J. | Animals (Basel) | 10.3390/ani14152167 | 2024 | | |
| Diversity and antibiotic resistance of cultivable bacteria in bulk tank milk from dairy farms in Shandong Province, China. | Qi Y, Lu Z, Meng Z, Wang X, Chen H, Li M, Qu C, Zhang P, Liu Y, Liu J. | Front Vet Sci | 10.3389/fvets.2025.1649876 | 2025 | | |
| Bacterial community of salted bluespot mullet (Valamugil seheli) | Al-Harbi AH, Al-Asous AI. | Lebensm Wiss Technol | 10.1016/j.lwt.2019.03.014 | 2019 | | |
| Rothia aeria pneumonia in an immunocompetent patient: A novel case study. | Sonehara K, Araki T, Hanaoka M. | Respirol Case Rep | 10.1002/rcr2.843 | 2021 | | |
| Induction of Apoptosis with Silver Nanoparticles Obtained Using Thermophilic Bacteria. | Cekuolyte K, Sapaite D, Zemgulyte E, Gudiukaite R, Lastauskiene E. | J Funct Biomater | 10.3390/jfb15060142 | 2024 | | |
| Exploring the Potential of Endophytic Microorganisms and Nanoparticles for Enhanced Water Remediation | Manganyi M, Dikobe T, Maseme M. | Molecules | 2024 | | ||
| Biotechnology | Photocatalytic and Antimicrobial Activities of Biosynthesized Silver Nanoparticles Using Cytobacillus firmus. | Saied E, Hashem AH, Ali OM, Selim S, Almuhayawi MS, Elbahnasawy MA. | Life (Basel) | 10.3390/life12091331 | 2022 | |
| Microbial contamination pathways in a poultry abattoir provided clues on the distribution and persistence of Arcobacter spp. | Botta C, Buzzanca D, Chiarini E, Chiesa F, Rubiola S, Ferrocino I, Fontanella E, Rantsiou K, Houf K, Alessandria V. | Appl Environ Microbiol | 10.1128/aem.00296-24 | 2024 | | |
| Enzymology | Comparative genomics of Rothia species reveals diversity in novel biosynthetic gene clusters and ecological adaptation to different eukaryotic hosts and host niches. | Oliveira IMF, Ng DYK, van Baarlen P, Stegger M, Andersen PS, Wells JM. | Microb Genom | 10.1099/mgen.0.000854 | 2022 | |
| Next-generation sequencing analysis of bacterial flora in bovine protothecal mastitic milk and feces. | Miura A, Kurumisawa T, Kano R, Ito T, Suzuki K, Kamata H. | J Vet Med Sci | 10.1292/jvms.18-0649 | 2019 | | |
| Enzymology | Tube-ovarian abscess caused by Rothia aeria. | Taira Y, Aoki Y. | BMJ Case Rep | 10.1136/bcr-2018-229017 | 2019 | |
| Single Molecule Real-Time Sequencing and Traditional Cultivation Techniques Reveal Complex Community Structures and Regional Variations of Psychrotrophic Bacteria in Raw Milk. | Du B, Meng L, Liu H, Zheng N, Zhang Y, Zhao S, Wang J. | Front Microbiol | 10.3389/fmicb.2022.853263 | 2022 | | |
| Pathogenicity | Two intestinal microbiota-derived metabolites, deoxycholic acid and butyrate, synergize to enhance host defense peptide synthesis and alleviate necrotic enteritis. | Kim DM, Liu J, Whitmore MA, Tobin I, Zhao Z, Zhang G. | J Anim Sci Biotechnol | 10.1186/s40104-024-00995-9 | 2024 | |
| Centrifugation does not remove bacteria from the fat fraction of human milk. | Stinson LF, Ma J, Rea A, Dymock M, Geddes DT. | Sci Rep | 10.1038/s41598-020-79793-y | 2021 | | |
| Metabolism | Gut microbial profiles and the role in lipid metabolism in Shaziling pigs. | Ma J, Duan Y, Li R, Liang X, Li T, Huang X, Yin Y, Yin J. | Anim Nutr | 10.1016/j.aninu.2021.10.012 | 2022 | |
| Exploring the biological application of Penicillium fimorum-derived silver nanoparticles: In vitro physicochemical, antifungal, biofilm inhibitory, antioxidant, anticoagulant, and thrombolytic performance. | Barabadi H, Mobaraki K, Jounaki K, Sadeghian-Abadi S, Vahidi H, Jahani R, Noqani H, Hosseini O, Ashouri F, Amidi S. | Heliyon | 10.1016/j.heliyon.2023.e16853 | 2023 | | |
| Quality and Safety of Marinating Breast Muscles of Hens from Organic Farming after the Laying Period with Buttermilk and Whey. | Augustynska-Prejsnar A, Sokolowicz Z, Hanus P, Ormian M, Kacaniova M. | Animals (Basel) | 10.3390/ani10122393 | 2020 | | |
| Phylogeny | Rothia aerolata sp. nov., isolated from exhaust air of a pig barn. | Kampfer P, Kleinhagauer T, Busse HJ, Klug K, Jackel U, Glaeser SP. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001153 | 2016 | |
| Phylogeny | Rothia endophytica sp. nov., an actinobacterium isolated from Dysophylla stellata (Lour.) Benth. | Xiong ZJ, Zhang JL, Zhang DF, Zhou ZL, Liu MJ, Zhu WY, Zhao LX, Xu LH, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.052522-0 | 2013 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive24206.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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