Schaalia turicensis (DSM 26658, V2901)

Name: Schaalia turicensis (DSM 26658, V2901)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23520

Type strain

Strain Designation V2901

Culture col. no. DSM 26658 V2901

NCBI tax ID(s) 131111

Special Collections DSMZ

Links

Schaalia turicensis V2901 is an anaerobe, mesophilic prokaryote that was isolated from 23 years old male with congenital femur hypoplasia.

anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 396929

DSM 26658

@ref 20215

Last LPSN update 2025-12-16 09:52:40

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Schaalia

Species Schaalia turicensis

Full scientific name Schaalia turicensis (Wüst et al. 1995) Nouioui et al. 2018

Synonyms (1)

Actinomyces turicensis

BacDive ID	Other strains from **Schaalia turicensis** (60)	Type strain
169	S. turicensis APL10, DSM 9168, ATCC 51857, CCUG 32401, ... (type strain)
135524	S. turicensis APL2, CIP 105580, CCUG 32395, LMG 15954
135832	S. turicensis CIP 100322
137621	S. turicensis CIP 101620
137784	S. turicensis CIP 101816
137796	S. turicensis CIP 102073
138637	S. turicensis CIP 101711
138644	S. turicensis CIP 101968
143146	S. turicensis CCUG 17439
143208	S. turicensis CCUG 17756 A
143332	S. turicensis CCUG 18440
144197	S. turicensis CCUG 23484
144568	S. turicensis CCUG 25712, NCTC 10604
144706	S. turicensis CCUG 26348
144944	S. turicensis CCUG 27229
145336	S. turicensis CCUG 28213
145558	S. turicensis CCUG 28828, LMG 14730
146453	S. turicensis CCUG 31183 B
146892	S. turicensis CCUG 32388, LMG 14329, ITG 75
146893	S. turicensis CCUG 32389, LMG 14330, ITG 131
146894	S. turicensis CCUG 32390, LMG 14331, ITG 137
146895	S. turicensis CCUG 32391, LMG 14332, ITG 296
146897	S. turicensis CCUG 32397
146898	S. turicensis CCUG 32398
146899	S. turicensis CCUG 32399
146900	S. turicensis CCUG 32400
147059	S. turicensis CCUG 32765 A
147197	S. turicensis CCUG 33037, ITG 900, LMG 14733
147198	S. turicensis CCUG 33038, ITG 886, LMG 14734
147199	S. turicensis CCUG 33039, ITG 147, LMG 14735
147200	S. turicensis CCUG 33040, ITG 143, LMG 14736
147201	S. turicensis CCUG 33041, ITG 284, LMG 14737
147202	S. turicensis CCUG 33042, ITG 806, LMG 14738
148015	S. turicensis CCUG 34683
148016	S. turicensis CCUG 34684
148763	S. turicensis CCUG 35913
150221	S. turicensis CCUG 39311
150444	S. turicensis CCUG 39946
150479	S. turicensis CCUG 41406
150738	S. turicensis CCUG 42131
151254	S. turicensis CCUG 43546
151315	S. turicensis CCUG 43731
151551	S. turicensis CCUG 44288
151638	S. turicensis CCUG 44501
151675	S. turicensis CCUG 44599 B
151716	S. turicensis CCUG 44702
152216	S. turicensis CCUG 46125 B
152225	S. turicensis CCUG 46166
152969	S. turicensis CCUG 48155
153467	S. turicensis CCUG 49695
153567	S. turicensis CCUG 50197
153790	S. turicensis CCUG 50981
154205	S. turicensis CCUG 52731
154680	S. turicensis CCUG 54825
154817	S. turicensis CCUG 55335
155051	S. turicensis CCUG 56285 B
155839	S. turicensis CCUG 59459
155935	S. turicensis CCUG 59677
156071	S. turicensis CCUG 60270
156643	S. turicensis CCUG 63811 B

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		92.375
125438		90.825	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20244	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20244	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
20244	anaerobe
125439	microaerophile	90.3

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	+		from API rID32A
68380	histidine arylamidase	+		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	+		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	+		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	+		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
20244	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	-	+	+	+	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20244	23 years old male with congenital femur hypoplasia	Rostock	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20244	2	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score	BV-BRC accession
66792	Schaalia turicensis DSM 26658	complete	2844634069	131111	99.15
66792	Schaalia turicensis strain DSM 26658	contig		131111	79.6	131111.10

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20244	Actinomyces turicensis isolate V2901 16S ribosomal RNA gene, partial sequence	EU130903	684		131111

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Schaalia turicensis strain DSM 26658
PATRIC: 131111.10

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	89.50	no
125439	motility	BacteriaNetⓘ	no	88.70	no
125439	gram_stain	BacteriaNetⓘ	positive	74.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	90.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Schaalia turicensis strain DSM 26658
PATRIC: 131111.10

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.83	no
125438	anaerobic	anaerobicⓘ	no	63.97	yes
125438	spore-forming	spore-formingⓘ	no	88.09	no
125438	aerobic	aerobicⓘ	no	75.33	yes
125438	thermophilic	thermophileⓘ	no	95.95	yes
125438	flagellated	motile2+ⓘ	no	92.38	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20244	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26658
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68380	Automatically annotated from API rID32A .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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