Micromonospora halotolerans (DSM 45598, CECT 7890, CR18)

Name: Micromonospora halotolerans (DSM 45598, CECT 7890, CR18)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23116

Type strain

Strain Designation CR18

Culture col. no. DSM 45598 CECT 7890 CR18 JCM 31701

NCBI tax ID(s) 709879

Special Collections DSMZ JCM

History <- M. E. Trujillo, Universidad de Salamanca, Spain; CR 18 <- L. Carro CECT 7890 <-- M. E. Trujillo, Univ. Salamanca, Spain; CR18.

Links

Micromonospora halotolerans CR18 is a bacterium that was isolated from rhizosphere of Pisum sativum.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 390807

JCM 31701,CECT 7890,DSM 45598

@ref 20215

Last LPSN update 2026-02-09 11:23:40

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Micromonospora

Species Micromonospora halotolerans

Full scientific name Micromonospora halotolerans Carro et al. 2013

Morphology

Multimedia

@ref:	18866
multimedia content:	DSM_45598.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45598.jpg
caption:	Medium 554 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
18866	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
18866	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
18866	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
18866	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18866	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Observation

67770

Observationquinones: MK-10(H₄), MK-10(H₆)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
18866	rhizosphere of Pisum sativum	Pisum sativum	Zamora Province, Canizal, (41°49'00''N, 6°13'00''W)	Spain	ESP	Europe	41.8167	-6.2167 41.8167/-6.2167
67770	Rhizosphere of a Pisum sativum plant	Pisum sativum	Cañizal	Spain	ESP	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18866	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM3210844v1 assembly for Micromonospora halotolerans DSM 45598	complete	GCA_032108445	709879.3	709879	92.85

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18866	Micromonospora halotolerans partial 16S rRNA gene, type strain CR18T	FN658652	1450		709879

GC content

@ref	GC-content (mol%)	Method
18866	71.5
67770	71.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Micromonospora halotolerans sp. nov., isolated from the rhizosphere of a Pisum sativum plant.	Carro L, Pukall R, Sproer C, Kroppenstedt RM, Trujillo ME	Antonie Van Leeuwenhoek	10.1007/s10482-013-9903-7	2013

References

#18866	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45598
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Micromonospora halotolerans (DSM 45598, CECT 7890, CR18)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_032108445

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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