"Actinoplanes hulinensis" (DSM 45728, BCC 72029, CGMCC 4.7036)

BacDive ID 23115

Type strain

Strain Designation NEAU-M9

Culture col. no. DSM 45728 BCC 72029 CGMCC 4.7036 NEAU-M9

NCBI tax ID(s) 1144547

Special Collections DSMZ

History <- C. Liu, School of Life Science, Northeast Agricultural Univ,. Harbin, China; NEAU-M9 <- Y. Shen, School of Life Science, China

Links

"Actinoplanes hulinensis" NEAU-M9 is a bacterium that was isolated from root of soybean Merr).

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 398160

DSM 45728

@ref 20215

Last LPSN update 2026-02-09 11:23:40

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Actinoplanes

Species "Actinoplanes hulinensis"

Full scientific name Actinoplanes hulinensis Shen et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	90.707
125439	positive	99.7

Multimedia

@ref:	19349
multimedia content:	DSM_45728.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45728.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
19349	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
19349	CZAPEK PEPTONE AGAR (DSMZ Medium 83)	Medium recipe at MediaDive	Name: CZAPEK PEPTONE AGAR (DSMZ Medium 83) Composition: Sucrose 30.0 g/l Agar 20.0 g/l Peptone 5.0 g/l NaNO3 3.0 g/l Yeast extract 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 0.5 g/l KCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Distilled water
19349	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
19349	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
19349	root of soybean (Glycine max (L.) Merr)	Glycine max	Heilongjiang province, Hulin	China	CHN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1942960v1 assembly for Actinoplanes hulinensis NEAU-M9	scaffold	GCA_019429605	1144547.3	8068273535	1144547	59.8

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
19349	Actinoplanes hulinensis strain NEAU-M9 16S ribosomal RNA gene, partial sequence	JQ073723	1511		1144547

GC content

@ref	GC-content (mol%)	Method
19349	67.90	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinoplanes hulinensis NEAU-M9
NCBI: GCA_019429605

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	87.50	no
125439	motility	BacteriaNetⓘ	no	89.50	no
125439	gram_stain	BacteriaNetⓘ	positive	99.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinoplanes hulinensis NEAU-M9
NCBI: GCA_019429605.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.71	no
125438	anaerobic	anaerobicⓘ	no	92.48	no
125438	aerobic	aerobicⓘ	yes	86.86	no
125438	spore-forming	spore-formingⓘ	yes	82.91	no
125438	thermophilic	thermophileⓘ	no	94.25	yes
125438	flagellated	motile2+ⓘ	no	61.33	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinoplanes flavus sp. nov., a novel cellulase-producing actinobacterium isolated from coconut palm rhizosphere soil.	Luo X, Sun X, Huang Z, He C, Zhao J, Xiang W, Song J, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.004990	2021
Phylogeny	Actinoplanes hulinensis sp. nov., a novel actinomycete isolated from soybean root (Glycine max (L.) Merr).	Shen Y, Liu C, Wang X, Zhao J, Jia F, Zhang Y, Wang L, Yang D, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-012-9809-9	2012
Phylogeny	Actinoplanes subglobosus sp. nov., isolated from mixed deciduous forest soil.	Ngaemthao W, Chunhametha S, Suriyachadkun C	Int J Syst Evol Microbiol	10.1099/ijsem.0.001440	2016

References

#19349	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45728
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Actinoplanes hulinensis" (DSM 45728, BCC 72029, CGMCC 4.7036)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_019429605

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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