Name: Gibbsiella dentisursi DSM 23818
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 23012

Type strain:

Species: Gibbsiella dentisursi

Culture col. no.: DSM 23818, DSMZ 23818, JCM 17201, NUM 1720, KCTC 5981

Strain history: M. Hirasawa NUM 1720.

NCBI tax ID(s): 796890 (species)

SI-ID 379616

JCM 17204, KCTC 5981, JCM 17201, LMG 27720, DSM 23818

Special Collections

Other strains from Gibbsiella dentisursi

Section

Gibbsiella dentisursi DSM 23818 is a bacterium that was isolated from oral cavity of a bear.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Gibbsiella*
	Species	**Gibbsiella dentisursi**
	Full Scientific Name (LPSN)	Gibbsiella dentisursi Saito et al. 2013

Synonym

Gibbsiella papilionis

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #19207]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19207]

Culture medium

BHI MEDIUM (DSMZ Medium 215)

[Ref.: #19207]

Culture medium growth

[Ref.: #19207]

Culture medium link

Medium recipe at MediaDive

[Ref.: #19207]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #19207]			growth	28 °C
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #19207]	Sample type/isolated from	oral cavity of a bear
[Ref.: #19207]	Country	Japan
[Ref.: #19207]	Country ISO 3 Code	JPN
[Ref.: #19207]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Bear oral cavity
* marker position based on {}

Isolation sources categories

#Host	#Mammals	-
#Host Body-Site	#Oral cavity and airways	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #19207]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Gibbsiella dentisursi strain DSM 23818 16S ribosomal RNA gene, partial sequence	KT036410	1344	GenBank ENA	796890 tax ID
[Ref.: #19207]	Gibbsiella dentisursi gene for 16S ribosomal RNA, partial sequence	AB566415	1535	GenBank ENA	796890 tax ID

[Ref.: #19207]	GC-content	55.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	55 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #19207]

Culture collection no.

DSM 23818, DSMZ 23818, JCM 17201, NUM 1720, KCTC 5981

[Ref.: #87252]

SI-ID 379616

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chania multitudinisentens gen. nov., sp. nov., an N-acyl-homoserine-lactone-producing bacterium in the family Enterobacteriaceae isolated from landfill site soil.	Ee R, Madhaiyan M, Ji L, Lim YL, Nor NM, Tee KK, Chen JW, Yin WF	Int J Syst Evol Microbiol	10.1099/ijsem.0.001025	2016	*
Phylogeny	Gibbsiella papilionis sp. nov., isolated from the intestinal tract of the butterfly Mycalesis gotama, and emended description of the genus Gibbsiella.	Kim PS, Shin NR, Kim JY, Yun JH, Hyun DW, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.045880-0	2012	*
Phylogeny	Gibbsiella dentisursi sp. nov., isolated from the bear oral cavity.	Saito M, Shinozaki-Kuwahara N, Takada K	Microbiol Immunol	10.1111/j.1348-0421.2012.00464.x	2012	*
Phylogeny	Gibbsiella papilionis Kim et al. 2013 is a later heterotypic synonym of Gibbsiella dentisursi Saito et al. 2013.	Brady C, Irisawa T, Iino T, Ohkuma M, Arnold D, Denman S	Int J Syst Evol Microbiol	10.1099/ijsem.0.000649	2015	*

References

#19207

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23818

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#87252

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID379616.1 )

* These data were automatically processed and therefore are not curated

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