Anaerococcus lactolyticus DSM 7456 is an anaerobe, mesophilic prokaryote that was isolated from vaginal discharge.
anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Clostridia |
| Order Tissierellales |
| Family Peptoniphilaceae |
| Genus Anaerococcus |
| Species Anaerococcus lactolyticus |
| Full scientific name Anaerococcus lactolyticus (Li et al. 1992) Ezaki et al. 2001 |
| Synonyms (1) |
| BacDive ID | Other strains from Anaerococcus lactolyticus (1) | Type strain |
|---|---|---|
| 147906 | A. lactolyticus CCUG 34465 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3161 | PYG MEDIUM (MODIFIED) (DSMZ Medium 104) | Medium recipe at MediaDive | Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water | ||
| 40773 | MEDIUM 20 - for Anaerobic bacteria | Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml) | |||
| 120535 | CIP Medium 20 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.7 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 3161 | A12.02 | A4alpha' L-Lys-D-Glu |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68380 | 16024 ChEBI | D-mannose | + | fermentation | from API rID32A |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 68380 | 16634 ChEBI | raffinose | - | fermentation | from API rID32A |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68380 | 16199 ChEBI | urea | + | hydrolysis | from API rID32A |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | from API rID32A |
| @ref | Chebi-ID | Metabolite | Indole test | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | - | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68380 | alanine arylamidase | + | 3.4.11.2 | from API rID32A |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68380 | alpha-glucosidase | - | 3.2.1.20 | from API rID32A |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | + | from API rID32A | |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | glycin arylamidase | + | from API rID32A | |
| 68380 | histidine arylamidase | + | from API rID32A | |
| 68380 | L-arginine arylamidase | + | from API rID32A | |
| 68380 | leucine arylamidase | + | 3.4.11.1 | from API rID32A |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68380 | phenylalanine arylamidase | - | from API rID32A | |
| 68380 | proline-arylamidase | - | 3.4.11.5 | from API rID32A |
| 68380 | serine arylamidase | + | from API rID32A | |
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68380 | tyrosine arylamidase | - | from API rID32A | |
| 68380 | urease | + | 3.5.1.5 | from API rID32A |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 100 | 8 of 8 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | peptidoglycan biosynthesis | 93.33 | 14 of 15 | ||
| 66794 | palmitate biosynthesis | 81.82 | 18 of 22 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | starch degradation | 80 | 8 of 10 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | purine metabolism | 68.09 | 64 of 94 | ||
| 66794 | glutamate and glutamine metabolism | 67.86 | 19 of 28 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | enterobactin biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | pyrimidine metabolism | 66.67 | 30 of 45 | ||
| 66794 | NAD metabolism | 61.11 | 11 of 18 | ||
| 66794 | hydrogen production | 60 | 3 of 5 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | oxidative phosphorylation | 57.14 | 52 of 91 | ||
| 66794 | reductive acetyl coenzyme A pathway | 57.14 | 4 of 7 | ||
| 66794 | citric acid cycle | 57.14 | 8 of 14 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | CO2 fixation in Crenarchaeota | 55.56 | 5 of 9 | ||
| 66794 | serine metabolism | 55.56 | 5 of 9 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | isoprenoid biosynthesis | 53.85 | 14 of 26 | ||
| 66794 | urea cycle | 53.85 | 7 of 13 | ||
| 66794 | alanine metabolism | 51.72 | 15 of 29 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | lactate fermentation | 50 | 2 of 4 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 50 | 4 of 8 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | methionine metabolism | 46.15 | 12 of 26 | ||
| 66794 | pentose phosphate pathway | 45.45 | 5 of 11 | ||
| 66794 | lipid metabolism | 45.16 | 14 of 31 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | d-mannose degradation | 44.44 | 4 of 9 | ||
| 66794 | degradation of sugar alcohols | 43.75 | 7 of 16 | ||
| 66794 | ubiquinone biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | flavin biosynthesis | 40 | 6 of 15 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | sulfate reduction | 38.46 | 5 of 13 | ||
| 66794 | ketogluconate metabolism | 37.5 | 3 of 8 | ||
| 66794 | vitamin B6 metabolism | 36.36 | 4 of 11 | ||
| 66794 | d-xylose degradation | 36.36 | 4 of 11 | ||
| 66794 | degradation of sugar acids | 36 | 9 of 25 | ||
| 66794 | tetrahydrofolate metabolism | 35.71 | 5 of 14 | ||
| 66794 | glutathione metabolism | 35.71 | 5 of 14 | ||
| 66794 | degradation of pentoses | 35.71 | 10 of 28 | ||
| 66794 | tryptophan metabolism | 34.21 | 13 of 38 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 33.33 | 4 of 12 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | arginine metabolism | 33.33 | 8 of 24 | ||
| 66794 | molybdenum cofactor biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | valine metabolism | 33.33 | 3 of 9 | ||
| 66794 | nitrate assimilation | 33.33 | 3 of 9 | ||
| 66794 | ascorbate metabolism | 31.82 | 7 of 22 | ||
| 66794 | leucine metabolism | 30.77 | 4 of 13 | ||
| 66794 | propionate fermentation | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | tyrosine metabolism | 28.57 | 4 of 14 | ||
| 66794 | lysine metabolism | 28.57 | 12 of 42 | ||
| 66794 | degradation of hexoses | 27.78 | 5 of 18 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | biotin biosynthesis | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | isoleucine metabolism | 25 | 2 of 8 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 23.08 | 3 of 13 | ||
| 66794 | chorismate metabolism | 22.22 | 2 of 9 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host Body-Site | #Urogenital tract | #Vagina | |
| #Host Body Product | #Urogenital tract | #Vaginal secretion |
Global distribution of 16S sequence AB673373 (>99% sequence identity) for Anaerococcus lactolyticus subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM15657v1 assembly for Anaerococcus lactolyticus ATCC 51172 | scaffold | 525254 | 19.98 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Anaerococcus lactolyticus strain CCUG 31351 16S ribosomal RNA gene, partial sequence | AF542233 | 1411 | 33032 | ||
| 20218 | Anaerococcus lactolyticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 8140 | AB673373 | 1489 | 33032 | ||
| 20218 | Anaerococcus lactolyticus gene for 16S ribosomal RNA, partial sequence | D14154 | 1375 | 33032 | ||
| 124043 | Anaerococcus lactolyticus strain JCM 8140 16S ribosomal RNA gene, partial sequence. | PQ788140 | 1411 | 33032 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 95.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 75.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 75.00 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate anaerobe | 98.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 85.19 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 83.67 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 73.83 | no |
| 125438 | aerobic | aerobicⓘ | no | 94.88 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 94.68 | no |
| 125438 | flagellated | motile2+ⓘ | no | 88.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
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| The Inhibitory Effect of Agastache rugosa Essential Oil on the Dental Biofilm. | Kim ES, Park BI, Kim YH, Kang J, You YO. | Molecules | 10.3390/molecules29204907 | 2024 | ||
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| Mechanistic insights into allosteric regulation of the reductase component of p-hydroxyphenylacetate 3-hydroxylase by p-hydroxyphenylacetate: a model for effector-controlled activity of redox enzymes. | Visitsatthawong S, Anuwan P, Lawan N, Chaiyen P, Wongnate T. | RSC Chem Biol | 10.1039/d4cb00213j | 2025 | ||
| Elucidating the Role of Biofilm-Forming Microbial Communities in Fermentative Biohydrogen Process: An Overview. | Sekoai PT, Chunilall V, Sithole B, Habimana O, Ndlovu S, Ezeokoli OT, Sharma P, Yoro KO. | Microorganisms | 10.3390/microorganisms10101924 | 2022 | ||
| Ligilactobacillus murinus Strains Isolated from Mice Intestinal Tract: Molecular Characterization and Antagonistic Activity against Food-Borne Pathogens. | Sandoval-Mosqueda IL, Llorente-Bousquets A, Soto C, Marquez CM, Fadda S, Del Rio Garcia JC. | Microorganisms | 10.3390/microorganisms11040942 | 2023 | ||
| Use of milk proteins as biomarkers of changes in the rumen metaproteome of Holstein cows fed low-fiber, high-starch diets. | Mulakala BK, Smith KM, Snider MA, Ayers A, Honan MC, Greenwood SL. | J Dairy Sci | 10.3168/jds.2022-22910 | 2023 | ||
| Enzymology | Cloning, overexpression, purification, and characterization of the maleylacetate reductase from Sphingobium chlorophenolicum strain ATCC 53874. | Chen L, Maloney K, Krol E, Zhu B, Yang J. | Curr Microbiol | 10.1007/s00284-009-9377-z | 2009 | |
| Influence of dietary carbohydrate profile on the dairy cow rumen meta-proteome. | Mulakala BK, Smith KM, Snider MA, Ayers A, Honan MC, Greenwood SL. | J Dairy Sci | 10.3168/jds.2022-21812 | 2022 | ||
| Non-homologous End Joining-Mediated Insertional Mutagenesis Reveals a Novel Target for Enhancing Fatty Alcohols Production in Yarrowia lipolytica. | Li M, Zhang J, Bai Q, Fang L, Song H, Cao Y. | Front Microbiol | 10.3389/fmicb.2022.898884 | 2022 | ||
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| Phylogeny | Actinomyces denticolens as a causative agent of actinomycosis in animals. | Murakami S, Kobayashi T, Sekigawa Y, Torii Y, Kanesaki Y, Ishige T, Yokoyama E, Ishiwata H, Hamada M, Tamura T. | J Vet Med Sci | 10.1292/jvms.18-0207 | 2018 | |
| Toward Biorecycling: Isolation of a Soil Bacterium That Grows on a Polyurethane Oligomer and Monomer. | Espinosa MJC, Blanco AC, Schmidgall T, Atanasoff-Kardjalieff AK, Kappelmeyer U, Tischler D, Pieper DH, Heipieper HJ, Eberlein C. | Front Microbiol | 10.3389/fmicb.2020.00404 | 2020 | ||
| Phylogeny | Characterization and reclassification of an aromatic- and chloroaromatic-degrading Pseudomonas sp., strain HV3, as Sphingomonas sp. HV3. | Yrjala K, Suomalainen S, Suhonen EL, Kilpi S, Paulin L, Romantschuk M. | Int J Syst Bacteriol | 10.1099/00207713-48-3-1057 | 1998 | |
| Comparative ribosomal protein (L11 and L30) sequence analyses of several Streptomyces spp. commonly used in genetic studies. | Kawamoto S, Ochi K. | Int J Syst Bacteriol | 10.1099/00207713-48-2-597 | 1998 | ||
| Metabolism | Human pleural fluid triggers global changes in the transcriptional landscape of Acinetobacter baumannii as an adaptive response to stress. | Martinez J, Fernandez JS, Liu C, Hoard A, Mendoza A, Nakanouchi J, Rodman N, Courville R, Tuttobene MR, Lopez C, Gonzalez LJ, Shahrestani P, Papp-Wallace KM, Vila AJ, Tolmasky ME, Bonomo RA, Sieira R, Ramirez MS. | Sci Rep | 10.1038/s41598-019-53847-2 | 2019 | |
| Development of an immunochromatographic assay kit using fluorescent silica nanoparticles for rapid diagnosis of Acanthamoeba keratitis. | Toriyama K, Suzuki T, Inoue T, Eguchi H, Hoshi S, Inoue Y, Aizawa H, Miyoshi K, Ohkubo M, Hiwatashi E, Tachibana H, Ohashi Y. | J Clin Microbiol | 10.1128/jcm.02595-14 | 2015 | ||
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| Enzymology | Crystallization and preliminary X-ray analysis of the reductase component of p-hydroxyphenylacetate 3-hydroxylase from Acinetobacter baumannii. | Oonanant W, Sucharitakul J, Chaiyen P, Yuvaniyama J. | Acta Crystallogr Sect F Struct Biol Cryst Commun | 10.1107/s1744309112016909 | 2012 | |
| Genome-resolved metagenomics and metatranscriptomics reveal niche differentiation in functionally redundant microbial communities at deep-sea hydrothermal vents. | Galambos D, Anderson RE, Reveillaud J, Huber JA. | Environ Microbiol | 10.1111/1462-2920.14806 | 2019 | ||
| Effects of high hydrostatic pressure on heat-resistant and heat-sensitive strains of Salmonella. | Metrick C, Hoover DG, Farkas DF. | J Food Sci | 10.1111/j.1365-2621.1989.tb05156.x | 1989 | ||
| Structure of a Rhodococcus gene encoding pigment production in Escherichia coli. | Hart S, Kirby R, Woods DR. | J Gen Microbiol | 10.1099/00221287-136-7-1357 | 1990 | ||
| Enzymology | Mechanistic and structural studies on Rhodococcus ATCC 39484 nitrilase. | Stevenson DE, Feng R, Dumas F, Groleau D, Mihoc A, Storer AC. | Biotechnol Appl Biochem | 10.1111/j.1470-8744.1992.tb00210.x | 1992 | |
| Pathogenicity | Aerococcus urinae and Globicatella sanguinis Persist in Polymicrobial Urethral Catheter Biofilms Examined in Longitudinal Profiles at the Proteomic Level. | Yu Y, Tsitrin T, Bekele S, Thovarai V, Torralba MG, Singh H, Wolcott R, Doerfert SN, Sizova MV, Epstein SS, Pieper R. | Biochem Insights | 10.1177/1178626419875089 | 2019 | |
| Metabolism | Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification. | Haft DH, Basu MK. | J Bacteriol | 10.1128/jb.00040-11 | 2011 | |
| Metabolism | Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites. | Perchat N, Saaidi PL, Darii E, Pelle C, Petit JL, Besnard-Gonnet M, de Berardinis V, Dupont M, Gimbernat A, Salanoubat M, Fischer C, Perret A. | Proc Natl Acad Sci U S A | 10.1073/pnas.1722368115 | 2018 | |
| Diverse CRISPRs evolving in human microbiomes. | Rho M, Wu YW, Tang H, Doak TG, Ye Y. | PLoS Genet | 10.1371/journal.pgen.1002441 | 2012 | ||
| Enzymology | Carbapenem-resistance and pathogenicity of bovine Acinetobacter indicus-like isolates. | Klotz P, Gottig S, Leidner U, Semmler T, Scheufen S, Ewers C. | PLoS One | 10.1371/journal.pone.0171986 | 2017 | |
| Metabolism | Importance of Glutamate Dehydrogenase (GDH) in Clostridium difficile Colonization In Vivo. | Girinathan BP, Braun S, Sirigireddy AR, Lopez JE, Govind R. | PLoS One | 10.1371/journal.pone.0160107 | 2016 | |
| Genetics | Where did you come from, where did you go: Refining metagenomic analysis tools for horizontal gene transfer characterisation. | Seiler E, Trappe K, Renard BY. | PLoS Comput Biol | 10.1371/journal.pcbi.1007208 | 2019 | |
| Metabolism | Regulation of cel genes of C. cellulolyticum: identification of GlyR2, a transcriptional regulator regulating cel5D gene expression. | Fendri I, Abdou L, Trotter V, Dedieu L, Maamar H, Minton NP, Tardif C. | PLoS One | 10.1371/journal.pone.0044708 | 2013 | |
| Enzymology | Abilities of the mCP Agar method and CRENAME alpha toxin-specific real-time PCR assay to detect Clostridium perfringens spores in drinking water. | Maheux AF, Berube E, Boudreau DK, Villeger R, Cantin P, Boissinot M, Bissonnette L, Bergeron MG. | Appl Environ Microbiol | 10.1128/aem.02791-13 | 2013 | |
| Metabolism | Bdellovibrio bacteriovorus inhibits Staphylococcus aureus biofilm formation and invasion into human epithelial cells. | Monnappa AK, Dwidar M, Seo JK, Hur JH, Mitchell RJ. | Sci Rep | 10.1038/srep03811 | 2014 | |
| Pathogenicity | Structure, Function, and Biosynthetic Origin of Octapeptin Antibiotics Active against Extensively Drug-Resistant Gram-Negative Bacteria. | Velkov T, Gallardo-Godoy A, Swarbrick JD, Blaskovich MAT, Elliott AG, Han M, Thompson PE, Roberts KD, Huang JX, Becker B, Butler MS, Lash LH, Henriques ST, Nation RL, Sivanesan S, Sani MA, Separovic F, Mertens H, Bulach D, Seemann T, Owen J, Li J, Cooper MA. | Cell Chem Biol | 10.1016/j.chembiol.2018.01.005 | 2018 | |
| Metabolism | Secretome profiling of Propionibacterium freudenreichii reveals highly variable responses even among the closely related strains. | Frohnmeyer E, Deptula P, Nyman TA, Laine PKS, Vihinen H, Paulin L, Auvinen P, Jokitalo E, Piironen V, Varmanen P, Savijoki K. | Microb Biotechnol | 10.1111/1751-7915.13254 | 2018 | |
| Metabolism | The carbohydrate metabolism signature of lactococcus lactis strain A12 reveals its sourdough ecosystem origin. | Passerini D, Coddeville M, Le Bourgeois P, Loubiere P, Ritzenthaler P, Fontagne-Faucher C, Daveran-Mingot ML, Cocaign-Bousquet M. | Appl Environ Microbiol | 10.1128/aem.01560-13 | 2013 | |
| Enzymology | The C-terminal domain of 4-hydroxyphenylacetate 3-hydroxylase from Acinetobacter baumannii is an autoinhibitory domain. | Phongsak T, Sucharitakul J, Thotsaporn K, Oonanant W, Yuvaniyama J, Svasti J, Ballou DP, Chaiyen P. | J Biol Chem | 10.1074/jbc.m112.354472 | 2012 | |
| Genetics | Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii. | Loux V, Mariadassou M, Almeida S, Chiapello H, Hammani A, Buratti J, Gendrault A, Barbe V, Aury JM, Deutsch SM, Parayre S, Madec MN, Chuat V, Jan G, Peterlongo P, Azevedo V, Le Loir Y, Falentin H. | BMC Genomics | 10.1186/s12864-015-1467-7 | 2015 | |
| Whole transcriptome analysis of Acinetobacter baumannii assessed by RNA-sequencing reveals different mRNA expression profiles in biofilm compared to planktonic cells. | Rumbo-Feal S, Gomez MJ, Gayoso C, Alvarez-Fraga L, Cabral MP, Aransay AM, Rodriguez-Ezpeleta N, Fullaondo A, Valle J, Tomas M, Bou G, Poza M. | PLoS One | 10.1371/journal.pone.0072968 | 2013 | ||
| Identification of Acinetobacter isolates from species belonging to the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with monoclonal antibodies specific for O Antigens of their lipopolysaccharides. | Pantophlet R, Severin JA, Nemec A, Brade L, Dijkshoorn L, Brade H. | Clin Diagn Lab Immunol | 10.1128/cdli.9.1.60-65.2002 | 2002 | ||
| A virulence and antimicrobial resistance DNA microarray detects a high frequency of virulence genes in Escherichia coli isolates from Great Lakes recreational waters. | Hamelin K, Bruant G, El-Shaarawi A, Hill S, Edge TA, Bekal S, Fairbrother JM, Harel J, Maynard C, Masson L, Brousseau R. | Appl Environ Microbiol | 10.1128/aem.00137-06 | 2006 | ||
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| #3161 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7456 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40773 | ; Curators of the CIP; |
| #50542 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 31351 |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68380 | Automatically annotated from API rID32A . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120535 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103725 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data