Name: Natranaerobius thermophilus JW/NM-WN-LF
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17654

Type strain:

Species: Natranaerobius thermophilus

Strain Designation: JW/NM-WN-LF

Culture col. no.: DSM 18059, ATCC BAA-1301

Strain history: <- J. Wiegel; JW/NM-WN-LF

NCBI tax ID(s): 375929 (species)

SI-ID 400078

DSM 18059

Section

Natranaerobius thermophilus JW/NM-WN-LF is an anaerobe, spore-forming, thermophilic bacterium that was isolated from mixed water-sediment sample.

motile
spore-forming
anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Natranaerobiales*
	Family	*Natranaerobiaceae*
	Genus	*Natranaerobius*
	Species	**Natranaerobius thermophilus**
	Full Scientific Name (LPSN)	Natranaerobius thermophilus Mesbah et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %93.312

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7353]

Culture medium

NATRANAEROBIUS MEDIUM (DSMZ Medium 1095)

[Ref.: #7353]

Culture medium growth

[Ref.: #7353]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7353]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7353]			growth	50 °C

[Ref.: #7353]

Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7353]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %100

[Ref.: #69480]

Ability of spore formation

yes Confidence in %97.03

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7353]	Sample type/isolated from	mixed water-sediment sample
[Ref.: #7353]	Geographic location (country and/or sea, region)	Wadi An Natrun Lake Fazda
[Ref.: #7353]	Country	Egypt
[Ref.: #7353]	Country ISO 3 Code	EGY
[Ref.: #7353]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ417202 (>99% sequence identity) for Natranaerobius thermophilus subclade from Microbeatlas

Aquatic Samples	204
Soil Samples	120
Animal Samples	4558
Plant Samples	33
Total Samples	4915

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7353]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7353]	Natranaerobius thermophilus JW/NM-WN-LF 16S ribosomal RNA gene, partial sequence	DQ417202	1426	ENA	457570 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Natranaerobius thermophilus JW/NM-WN-LF	GCA_000020005	complete	GenBank	457570 tax ID	*
[Ref.: #66792]	Natranaerobius thermophilus JW/NM-WN-LF	457570.21	plasmid	PATRIC	457570 tax ID	*
[Ref.: #66792]	Natranaerobius thermophilus JW/NM-WN-LF	457570.14	complete	PATRIC	457570 tax ID	*
[Ref.: #66792]	Natranaerobius thermophilus JW/NM-WN-LF	457570.20	plasmid	PATRIC	457570 tax ID	*
[Ref.: #66792]	Natranaerobius thermophilus JW/NM-WN-LF	642555142	complete	JGI IMG/M	457570 tax ID	*

[Ref.: #7353]

GC-content

40.4 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Natranaerobius thermophilus JW/NM-WN-LF PATRIC: 457570.14
[Ref.: #69481]	spore-forming	yes	65	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Natranaerobius thermophilus JW/NM-WN-LF JW/NM-WN-LF NCBI: GCA_000020005.1
[Ref.: #69480]	motile	yes	81.516	no
[Ref.: #69480]	flagellated	no	86.603	no
[Ref.: #69480]	gram-positive	no	67.19	no
[Ref.: #69480]	anaerobic	yes	98.693	no
[Ref.: #69480]	aerobic	no	91.81	no
[Ref.: #69480]	halophile	no	61.879	no
[Ref.: #69480]	spore-forming	yes	79.042	no
[Ref.: #69480]	thermophile	yes	95.314	yes
[Ref.: #69480]	glucose-util	yes	86.647	no
[Ref.: #69480]	glucose-ferment	no	71.75	no

Availability in culture collections External links

[Ref.: #7353]

Culture collection no.

DSM 18059, ATCC BAA-1301

[Ref.: #86645]

SI-ID 400078

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of the anaerobic, halophilic alkalithermophile Natranaerobius thermophilus JW/NM-WN-LF.	Zhao B, Mesbah NM, Dalin E, Goodwin L, Nolan M, Pitluck S, Chertkov O, Brettin TS, Han J, Larimer FW, Land ML, Hauser L, Kyrpides N, Wiegel J	J Bacteriol	10.1128/JB.05157-11	2011	*
Phylogeny	Natranaerobius thermophilus gen. nov., sp. nov., a halophilic, alkalithermophilic bacterium from soda lakes of the Wadi An Natrun, Egypt, and proposal of Natranaerobiaceae fam. nov. and Natranaerobiales ord. nov.	Mesbah NM, Hedrick DB, Peacock AD, Rohde M, Wiegel J	Int J Syst Evol Microbiol	10.1099/ijs.0.65068-0	2007	*

References

#7353

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18059

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86645

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400078.1 )

* These data were automatically processed and therefore are not curated

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Natranaerobius thermophilus JW/NM-WN-LF

Natranaerobius thermophilus JW/NM-WN-LF JW/NM-WN-LF

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