Vibrio parahaemolyticus (DSM 11058, ATCC 43996, NCTC 10884)

Name: Vibrio parahaemolyticus (DSM 11058, ATCC 43996, NCTC 10884)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17268

Type strain

Strain Designation Truro 70

Culture col. no. DSM 11058 ATCC 43996 NCTC 10884 Truro 70

NCBI tax ID(s) 670

Special Collections DSMZ

History DSMZ <- NCTC <- G. I. Barrow; Truro 70

Links

Vibrio parahaemolyticus Truro 70 is a bacterium that was isolated from cockles causing food poisoning.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 45182

ATCC 43996,NCTC 10884,DSM 11058,CECT 5271,ACM 3913

@ref 20215

Last LPSN update 2026-05-29 08:28:58

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio parahaemolyticus

Full scientific name Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

Synonyms (2)

Beneckea parahaemolytica
"Pasteurella parahaemolytica"

BacDive ID	Other strains from **Vibrio parahaemolyticus** (48)	Type strain
17267	V. parahaemolyticus 113, EB 101, DSM 10027, ATCC 17802, CIP 75.2, ... (type strain)
17266	V. parahaemolyticus MIII-2-5, DSM 2172, CCM 5940, CCUG 4990
17269	V. parahaemolyticus P-5, DSM 15416
17270	V. parahaemolyticus VL 2074, DSM 15477, NCTC 11347
17271	V. parahaemolyticus DSM 25722, NCCP 13713
24659	V. parahaemolyticus VL 1225, DSM 27657, CIP 111237, NCTC 11344, ...
131028	V. parahaemolyticus Truro 69/61527, DSM 101031, CCUG 67717, NCTC ...
135235	V. parahaemolyticus 1132-70, CIP 71.1
135236	V. parahaemolyticus AH25712, CIP 104156
136696	V. parahaemolyticus 1192-70, CIP 71.2
136769	V. parahaemolyticus BB22, CIP 105615
136886	V. parahaemolyticus CIP 78.26
139051	V. parahaemolyticus R777, CIP 73.30
139487	V. parahaemolyticus CIP 110006, RIMD 2210633
139488	V. parahaemolyticus 64 T, CIP 70.64
139557	V. parahaemolyticus 64 S, CIP 70.63
139660	V. parahaemolyticus R622, Fofama, CIP 109835, CIP 200570
141329	V. parahaemolyticus CCUG 885 C, NCTC 10441
141703	V. parahaemolyticus CCUG 4991, CCM 5937
142841	V. parahaemolyticus CCUG 15266
142844	V. parahaemolyticus CCUG 15269 A
143434	V. parahaemolyticus CCUG 19113, ATCC 27969
144085	V. parahaemolyticus CCUG 22891
145649	V. parahaemolyticus CCUG 29132
148052	V. parahaemolyticus CCUG 34734
148074	V. parahaemolyticus CCUG 34775
148148	V. parahaemolyticus CCUG 34902
148149	V. parahaemolyticus CCUG 34903
149171	V. parahaemolyticus CCUG 36990
149696	V. parahaemolyticus CCUG 38226
149797	V. parahaemolyticus CCUG 38426, CECT 612
150025	V. parahaemolyticus CCUG 38871
150094	V. parahaemolyticus CCUG 38981
150695	V. parahaemolyticus CCUG 41978
150944	V. parahaemolyticus CCUG 42817
151146	V. parahaemolyticus CCUG 43362
151147	V. parahaemolyticus CCUG 43363
151148	V. parahaemolyticus CCUG 43364
151149	V. parahaemolyticus CCUG 43365
151965	V. parahaemolyticus CCUG 45389
151967	V. parahaemolyticus CCUG 45391
152075	V. parahaemolyticus CCUG 45701
152525	V. parahaemolyticus CCUG 47003
152526	V. parahaemolyticus CCUG 47004
152576	V. parahaemolyticus CCUG 47109
153868	V. parahaemolyticus CCUG 51447
174739	V. parahaemolyticus TS-8-11-4, DSM 107522
179139	V. parahaemolyticus IMET 10858, STI10858

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	100

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4177	REACTIVATION WITH LIQUID MEDIUM 514 (DSMZ Medium 514c)		Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 514 (DSMZ Medium 514c) Composition: NaCl 19.45 g/l Agar 18.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l Na2CO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
4177	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
4177	positive	growth	28

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.469

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
68368	25094 ChEBI	lysine	+	degradation	from API 20E
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68369	27897 ChEBI	tryptophan	+	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68369	35581 ChEBI	indole	from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	-		from API 20E
68369	35581 ChEBI	indole		+	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68368	cytochrome oxidase	+	1.9.3.1	from API 20E
68369	gelatinase	+		from API 20NE
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68369	urease	-	3.5.1.5	from API 20NE
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
4177	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
4177	-	-	+	+	-	-	-	-	+	-	+	+	+	-	-	-	-	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
4177	+	+	+	-	-	+	+	+	+	+	+	+	+	+	+	+	-	+	-	-	+
4177	+	+	-	-	-	-	+	+	+	+	+	+	+	+	+	-	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Invertebrates (Other)	#Mollusca

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4177	cockles causing food poisoning	Cornwall	United Kingdom	GBR	Europe

Taxonmaps

69479

Global distribution of 16S sequence HM007587 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	3075
Soil Samples	169
Animal Samples	1856
Plant Samples	64
Total Samples	5164

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4177	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	39111_F02 assembly for Vibrio parahaemolyticus NCTC10884	contig	GCA_900460415	670.1461	670	77.95

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Vibrio parahaemolyticus strain ATCC 43996 16S ribosomal RNA (rrs) gene, partial sequence	EU155487	890		670
20218	Vibrio parahaemolyticus strain DSM 11058 16S ribosomal RNA gene, partial sequence	HM007587	1351		670

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 39111_F02 assembly for Vibrio parahaemolyticus NCTC10884
NCBI: GCA_900460415

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	64.39	no
125439	gram_stain	BacteriaNetⓘ	negative	86.84	no
125439	spore_formation	BacteriaNetⓘ	no	99.47	no
125439	motility	BacteriaNetⓘ	yes	45.62	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Vibrio parahaemolyticus strain NCTC10884
PATRIC: 670.1461

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	97.62	no
125438	spore-forming	spore-formingⓘ	no	83.54	no
125438	aerobic	aerobicⓘ	no	64.78	no
125438	thermophilic	thermophileⓘ	no	99.50	yes
125438	flagellated	motile2+ⓘ	yes	88.20	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Meta-Analysis and Systematic Review of Phenotypic and Genotypic Antimicrobial Resistance and Virulence Factors in Vibrio parahaemolyticus Isolated from Shrimp.	Thaotumpitak V, Odoi JO, Anuntawirun S, Jeamsripong S.	Antibiotics (Basel)	10.3390/antibiotics13040370	2024
	Prevalence and Characterization of Food-Borne Vibrio parahaemolyticus From African Salad in Southern Nigeria.	Igbinosa EO, Beshiru A, Igbinosa IH, Ogofure AG, Uwhuba KE.	Front Microbiol	10.3389/fmicb.2021.632266	2021
Phylogeny	Multiplex PCR for detection of the Vibrio genus and five pathogenic Vibrio species with primer sets designed using comparative genomics.	Kim HJ, Ryu JO, Lee SY, Kim ES, Kim HY.	BMC Microbiol	10.1186/s12866-015-0577-3	2015
	Structure and co-occurrence patterns of bacterial communities associated with white faeces disease outbreaks in Pacific white-leg shrimp Penaeus vannamei aquaculture.	Alfiansah YR, Peters S, Harder J, Hassenruck C, Gardes A.	Sci Rep	10.1038/s41598-020-68891-6	2020
	Severe Wound Infection with Photobacterium damselae ssp. damselae and Vibrio harveyi, following a Laceration Injury in Marine Environment: A Case Report and Review of the Literature.	Hundenborn J, Thurig S, Kommerell M, Haag H, Nolte O.	Case Rep Med	10.1155/2013/610632	2013
Enzymology	Occurrence of Vibrio pathotypes in the final effluents of five wastewater treatment plants in Amathole and Chris Hani District Municipalities in South Africa.	Nongogo V, Okoh AI.	Int J Environ Res Public Health	10.3390/ijerph110807755	2014
Enzymology	Prevalence and characterisation of non-cholerae Vibrio spp. in final effluents of wastewater treatment facilities in two districts of the Eastern Cape Province of South Africa: implications for public health.	Okoh AI, Sibanda T, Nongogo V, Adefisoye M, Olayemi OO, Nontongana N.	Environ Sci Pollut Res Int	10.1007/s11356-014-3461-z	2015
	Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities.	Alfiansah YR, Hassenruck C, Kunzmann A, Taslihan A, Harder J, Gardes A.	Front Microbiol	10.3389/fmicb.2018.02457	2018
	Fitness and transcriptomic analysis of pathogenic Vibrio parahaemolyticus in seawater at different shellfish harvesting temperatures.	Liu Z, Liao C, Wang L.	Microbiol Spectr	10.1128/spectrum.02783-23	2023
	The Effect of Lavandula Stoechas on Toxigenesis and the Growth of Vibrio Parahaemolyticus.	Maghsoudi O, Zeraatkar M, Dolatabadi M, Johari A, Barati Karizno M, Ranjbar R.	Iran J Pathol	10.30699/ijp.13.2.245	2018
	Isolation, detection of virulence genes, antibiotic resistance genes, plasmid profile, and molecular typing among Vibrio parahaemolyticus isolated in Malaysian seawater from recreational beaches and fish.	Faja OM, Sharad AA, Younis KM, Alwan MG, Mohammed BJ, Ahmad A.	Vet World	10.14202/vetworld.2019.1140-1149	2019
	Establishment and Validation of RNA-Based Predictive Models for Understanding Survival of Vibrio parahaemolyticus in Oysters Stored at Low Temperatures.	Liao C, Zhao Y, Wang L.	Appl Environ Microbiol	10.1128/aem.02765-16	2017
	In Vitro and In Silico Screening of Anti-Vibrio spp., Antibiofilm, Antioxidant and Anti-Quorum Sensing Activities of Cuminum cyminum L. Volatile Oil.	Ghannay S, Aouadi K, Kadri A, Snoussi M.	Plants (Basel)	10.3390/plants11172236	2022
	Antimicrobial activities of Asian plant extracts against pathogenic and spoilage bacteria.	Han A, Hwang JH, Lee SY.	Food Sci Biotechnol	10.1007/s10068-022-01182-0	2023
Phylogeny	Pulsed-field gel electrophoresis and PCR characterization of environmental Vibrio parahaemolyticus strains of different origins.	Suffredini E, Lopez-Joven C, Maddalena L, Croci L, Roque A.	Appl Environ Microbiol	10.1128/aem.00333-11	2011
	Development of Antibacterial Biocomposites Based on Poly(lactic acid) with Spice Essential Oil (Pimpinella anisum) for Food Applications.	Noori N, Khanjari A, Rezaeigolestani M, Karabagias IK, Mokhtari S.	Polymers (Basel)	10.3390/polym13213791	2021
	Use and Evaluation of a pES213-Derived Plasmid for the Constitutive Expression of gfp Protein in Pathogenic Vibrios: a Tagging Tool for In Vitro Studies.	Norfolk WA, Lipp EK.	Microbiol Spectr	10.1128/spectrum.02490-22	2023
Enzymology	Long-term study of Vibrio parahaemolyticus prevalence and distribution in New Zealand shellfish.	Cruz CD, Hedderley D, Fletcher GC.	Appl Environ Microbiol	10.1128/aem.04020-14	2015
Phylogeny	Characterization of pathogenic Vibrio parahaemolyticus isolates from clinical sources in Spain and comparison with Asian and North American pandemic isolates.	Martinez-Urtaza J, Lozano-Leon A, DePaola A, Ishibashi M, Shimada K, Nishibuchi M, Liebana E.	J Clin Microbiol	10.1128/jcm.42.10.4672-4678.2004	2004
Biotechnology	Comparison of conventional PCR, multiplex PCR, and loop-mediated isothermal amplification assays for rapid detection of Arcobacter species.	Wang X, Seo DJ, Lee MH, Choi C.	J Clin Microbiol	10.1128/jcm.02883-13	2014
Phylogeny	Selection and identification of non-pathogenic bacteria isolated from fermented pickles with antagonistic properties against two shrimp pathogens.	Zokaeifar H, Balcazar JL, Kamarudin MS, Sijam K, Arshad A, Saad CR.	J Antibiot (Tokyo)	10.1038/ja.2012.17	2012
Enzymology	Phenotypic and Genetic Diversity of Aeromonas Species Isolated from Fresh Water Lakes in Malaysia.	Khor WC, Puah SM, Tan JA, Puthucheary SD, Chua KH.	PLoS One	10.1371/journal.pone.0145933	2015
	Chemical and Biological Evaluation of Essential Oils from Cardamom Species.	Noumi E, Noumi E, Snoussi M, Alreshidi MM, Rekha PD, Saptami K, Caputo L, De Martino L, Souza LF, Msaada K, Mancini E, Flamini G, Al-Sieni A, De Feo V.	Molecules	10.3390/molecules23112818	2018
Biotechnology	Diagnostic microarray for 14 water and foodborne pathogens using a flatbed scanner.	Srinivasan V, Stedtfeld RD, Tourlousse DM, Baushke SW, Xin Y, Miller SM, Pham T, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA.	J Microbiol Methods	10.1016/j.mimet.2017.04.009	2017
Metabolism	Quantitative detection of Vibrio cholera toxin by real-time and dynamic cytotoxicity monitoring.	Jin D, Luo Y, Zheng M, Li H, Zhang J, Stampfl M, Xu X, Ding G, Zhang Y, Tang YW.	J Clin Microbiol	10.1128/jcm.01959-13	2013
	PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species.	Hoffmann M, Brown EW, Feng PC, Keys CE, Fischer M, Monday SR.	BMC Microbiol	10.1186/1471-2180-10-90	2010
Enzymology	In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water.	Miller SM, Tourlousse DM, Stedtfeld RD, Baushke SW, Herzog AB, Wick LM, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA.	Appl Environ Microbiol	10.1128/aem.01962-07	2008
	Vibrio parahaemolyticus-specific Halobacteriovorax From Seawater of a Mussel Harvesting Area in the Adriatic Sea: Abundance, Diversity, Efficiency and Relationship With the Prey Natural Level.	Ottaviani D, Pieralisi S, Rocchegiani E, Latini M, Leoni F, Mosca F, Pallavicini A, Tiscar PG, Angelico G.	Front Microbiol	10.3389/fmicb.2020.01575	2020
	Purification, crystallization and preliminary X-ray crystallographic analysis of the putative Vibrio parahaemolyticus resuscitation-promoting factor YeaZ.	Aydin I, Dimitropoulos A, Chen SH, Thomas C, Roujeinikova A.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309111010219	2011
Enzymology	Detection of bacterial pathogens by phage antibody display.	Pai N, Topping KP, Greenman J, Paget TA.	Dis Markers	10.1155/2000/725976	2000
	Structural analysis of the essential resuscitation promoting factor YeaZ suggests a mechanism of nucleotide regulation through dimer reorganization.	Aydin I, Saijo-Hamano Y, Namba K, Thomas C, Roujeinikova A.	PLoS One	10.1371/journal.pone.0023245	2011
Enzymology	Urease-positive, Kanagawa-negative Vibrio parahaemolyticus from patients and the environment in the Pacific Northwest.	Kelly MT, Stroh EM.	J Clin Microbiol	10.1128/jcm.27.12.2820-2822.1989	1989
Phylogeny	Identification of Gram-negative non-fermenters and oxidase-positive fermenters by the Oxi/Ferm tube.	Holmes B, Dowling J, Lapage SP.	J Clin Pathol	10.1136/jcp.32.1.78	1979
	Development of a rapid PCR protocol to detect Vibrio parahaemolyticus in clams.	Federici S, Serrazanetti DI, Guerzoni ME, Campana R, Ciandrini E, Baffone W, Gianotti A	J Food Sci Technol	10.1007/s13197-017-2986-9	2017
	Responses of Mytilus galloprovincialis hemocytes to environmental strains of Vibrio parahaemolyticus, Vibrio alginolyticus, Vibrio vulnificus.	Ciacci C, Manti A, Canonico B, Campana R, Camisassi G, Baffone W, Canesi L	Fish Shellfish Immunol	10.1016/j.fsi.2017.04.002	2017
Biotechnology	Influence of growth conditions on pressure resistance of Vibrio parahaemolyticus in oysters and the optimization of postpressure treatment recovery conditions.	Ye M, Huang Y, Neetoo H, Shearer AE, Chen H	J Food Prot	10.4315/0362-028X.JFP-10-521	2011
Cultivation	Retention of virulence in viable but non-culturable halophilic Vibrio spp.	Baffone W, Citterio B, Vittoria E, Casaroli A, Campana R, Falzano L, Donelli G	Int J Food Microbiol	10.1016/s0168-1605(03)00102-8	2003

References

#4177	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11058
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68368	Automatically annotated from API 20E .
#68369	Automatically annotated from API 20NE .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Vibrio parahaemolyticus (DSM 11058, ATCC 43996, NCTC 10884)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900460415

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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