Actinoallomurus radicium (DSM 45523, JCM 17294, NBRC 107678)

Name: Actinoallomurus radicium (DSM 45523, JCM 17294, NBRC 107678)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17016

Type strain

Strain Designation K08-0182

Culture col. no. DSM 45523 JCM 17294 NBRC 107678 K08-0182

NCBI tax ID(s) 877472

Special Collections DSMZ JCM Literature strains

History <- Y. Takahashi, Kitasato Universtiy, Japan; K08-0182 <- A. Fukuda A. Matsumoto K08-0182.

Links

Actinoallomurus radicium K08-0182 is an aerobe, spore-forming bacterium that was isolated from root of a Mondo grass.

spore-forming aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397765

NBRC 107678,JCM 17294,DSM 45523

@ref 20215

Last LPSN update 2026-02-09 11:22:06

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Thermomonosporaceae

Genus Actinoallomurus

Species Actinoallomurus radicium

Full scientific name Actinoallomurus radicium Matsumoto et al. 2012

Morphology

Pigmentation

30083

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
17497	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
17497	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
17497	ISP2 MEDIUM (DSMZ Medium 987)	Medium recipe at MediaDive	Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water
17497	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17497	positive	growth	28
30083	positive	growth	12-36
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH
30083	positive	growth	05-07

Physiology and metabolism

Oxygen tolerance

30083

Oxygen toleranceaerobe

Spore formation

30083

Spore formationyes

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30083	17234 ChEBI	glucose	+	carbon source
30083	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30083	acid phosphatase	+	3.1.3.2
30083	alkaline phosphatase	+	3.1.3.1
30083	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
17497	root of a Mondo grass		Kanagawa Prefecture	Japan	JPN	Asia
67770	Root of a mondo grass (Ophiopogon japonicus)	Ophiopogon japonicus	Kanagawa Pref.	Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17497	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17497	Actinoallomurus radicium gene for 16S rRNA, partial sequence	AB578855	1487		877472

GC content

@ref	GC-content (mol%)	Method
17497	72	high performance liquid chromatography (HPLC)
30083	72-73
67770	72-73	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinoallomurus radicium sp. nov., isolated from the roots of two plant species.	Matsumoto A, Fukuda A, Inahashi Y, Omura S, Takahashi Y	Int J Syst Evol Microbiol	10.1099/ijs.0.029181-0	2011

References

#17497	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45523
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26440	IJSEM 295 2012 ( DOI 10.1099/ijs.0.029181-0 , PubMed 21421931 )
#30083	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26440
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinoallomurus radicium (DSM 45523, JCM 17294, NBRC 107678)

Name and taxonomic classification

Morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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