Name: Actinoallomurus acaciae DSM 45503
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17014

Type strain:

Species: Actinoallomurus acaciae

Culture col. no.: DSM 45503, BCC 28622, NBRC 104354, NRRL B-24610, GMKU 931, JCM 17235, TBRC 563

Strain history: BCC 28622 <-- A. Thamchaipenet GMKU 931.

NCBI tax ID(s): 502577 (species)

SI-ID 397753

DSM 45503

Special Collections

Section

Actinoallomurus acaciae DSM 45503 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from root of wattle tree, Acacia auriculiformis.

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinoallomurus*
	Species	**Actinoallomurus acaciae**
	Full Scientific Name (LPSN)	Actinoallomurus acaciae Thamchaipenet et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29395]	Gram stain	positive

[Ref.: #29395]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17311]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #17311]

Culture medium growth

[Ref.: #17311]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17311]

Culture medium composition

expand / minimize

[Ref.: #17311]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #17311]

Culture medium growth

[Ref.: #17311]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #17311]	growth	28 °C
[Ref.: #29395]	optimum	29 °C
[Ref.: #67770]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #29395]			optimum	6.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29395]

Oxygen tolerance

aerobe

[Ref.: #29395]

Ability of spore formation

yes

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29395]	mannose ChEBI	+	carbon source
[Ref.: #29395]	rhamnose ChEBI	+	carbon source
[Ref.: #29395]	trehalose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #29395]	acid phosphatase	+	3.1.3.2
[Ref.: #29395]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29395]	catalase	+	1.11.1.6
[Ref.: #29395]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17311]	Sample type/isolated from	root of wattle tree, Acacia auriculiformis
[Ref.: #17311]	Geographic location (country and/or sea, region)	Bangkok
[Ref.: #17311]	Country	Thailand
[Ref.: #17311]	Country ISO 3 Code	THA
[Ref.: #17311]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Root of Acacia auriculiformis A. Cunn. ex Benth. in Kasetsart Univ.
[Ref.: #67770]	Host species	Acacia auriculiformis
[Ref.: #67770]	Geographic location (country and/or sea, region)	Bangkok
[Ref.: #67770]	Country	Thailand
[Ref.: #67770]	Country ISO 3 Code	THA
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU429322 (>99% sequence identity) for Actinoallomurus from Microbeatlas

Aquatic Samples	70
Soil Samples	1187
Animal Samples	33
Plant Samples	46
Total Samples	1336

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17311]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17311]	Actinoallomurus acaciae strain GMKU 931 16S ribosomal RNA gene, partial sequence	EU429322	1468	GenBank ENA	502577 tax ID

[Ref.: #17311]	GC-content	70.6 mol%
[Ref.: #67770]	GC-content	70.6 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #17311]

Culture collection no.

DSM 45503, BCC 28622, NBRC 104354, NRRL B-24610, GMKU 931, JCM 17235, TBRC 563

[Ref.: #86015]

SI-ID 397753

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinoallomurus acaciae sp. nov., an endophytic actinomycete isolated from Acacia auriculiformis A. Cunn. ex Benth.	Thamchaipenet A, Indananda C, Bunyoo C, Duangmal K, Matsumoto A, Takahashi Y	Int J Syst Evol Microbiol	10.1099/ijs.0.012237-0	2009	*

References

#17311

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45503

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29395

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25802 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86015

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397753.1 )

#25802

IJSEM 554 2010 ( DOI 10.1099/ijs.0.012237-0 , PubMed 19654340 )

* These data were automatically processed and therefore are not curated

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