Name: Mechercharimyces mesophilus YM3-251
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16749

Type strain:

Species: Mechercharimyces mesophilus

Strain Designation: YM3-251

Culture col. no.: DSM 44894, MBIC 06230

Strain history: <- A. Katsuta, MBIC <- Y. Matsuo; YM3-251

NCBI tax ID(s): 354237 (species)

SI-ID 281427

DSM 44894

Special Collections

DSMZ

Section

Mechercharimyces mesophilus YM3-251 is a bacterium that was isolated from sediment sample from a marine lake.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Thermoactinomycetaceae*
	Genus	*Mechercharimyces*
	Species	**Mechercharimyces mesophilus**
	Full Scientific Name (LPSN)	Mechercharimyces mesophilus Matsuo et al. 2006

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12179]

Culture medium

TCG MEDIUM (DSMZ Medium 1009)

[Ref.: #12179]

Culture medium growth

[Ref.: #12179]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12179]

Culture medium composition

expand / minimize

[Ref.: #12179]

Culture medium

SEA WATER AGAR (DSMZ Medium 246)

[Ref.: #12179]

Culture medium growth

[Ref.: #12179]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #12179]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #12179]

Culture medium growth

[Ref.: #12179]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #12179]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12179]	Sample type/isolated from	sediment sample from a marine lake
[Ref.: #12179]	Geographic location (country and/or sea, region)	Jellyfish Lake
[Ref.: #12179]	Country	Palau
[Ref.: #12179]	Country ISO 3 Code	PLW
[Ref.: #12179]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB239529 (>99% sequence identity) for Mechercharimyces from Microbeatlas

Aquatic Samples	45
Soil Samples	15
Animal Samples	39
Plant Samples	3
Total Samples	102

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12179]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12179]	Mechercharimyces mesophilus gene for 16S rRNA, partial sequence, strain: YM3-251 (= MBIC06230)	AB239529	1481	GenBank ENA	354237 tax ID

[Ref.: #12179]

GC-content

45.1 mol%

Availability in culture collections External links

[Ref.: #12179]

Culture collection no.

DSM 44894, MBIC 06230

[Ref.: #85767]

SI-ID 281427

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mechercharimyces mesophilus gen. nov., sp. nov. and Mechercharimyces asporophorigenens sp. nov., antitumour substance-producing marine bacteria, and description of Thermoactinomycetaceae fam. nov.	Matsuo Y, Katsuta A, Matsuda S, Shizuri Y, Yokota A, Kasai H	Int J Syst Evol Microbiol	10.1099/ijs.0.64223-0	2006	*

References

#12179

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44894

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85767

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID281427.1 )

* These data were automatically processed and therefore are not curated

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