Name: Mechercharimyces asporophorigenens DSM 44955
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16750

Type strain:

Species: Mechercharimyces asporophorigenens

Culture col. no.: DSM 44955, MBIC 06487, YM 11-542

Strain history: <- A. Katsuta; MBIC 06487 <- Y. Matsuo; YM 11-542

NCBI tax ID(s): 354240 (species)

SI-ID 281430

DSM 44955

Special Collections

DSMZ

Section

Mechercharimyces asporophorigenens DSM 44955 is an aerobe bacterium that was isolated from sediment.

aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Thermoactinomycetaceae*
	Genus	*Mechercharimyces*
	Species	**Mechercharimyces asporophorigenens**
	Full Scientific Name (LPSN)	Mechercharimyces asporophorigenens Matsuo et al. 2006

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 514 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

TCG MEDIUM (DSMZ Medium 1009)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #12208]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12208]	Sample type/isolated from	sediment
[Ref.: #12208]	Geographic location (country and/or sea, region)	Marine Lake
[Ref.: #12208]	Country	Palau
[Ref.: #12208]	Country ISO 3 Code	PLW
[Ref.: #12208]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

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Global distribution of 16S sequence AB239532 (>99% sequence identity) for Mechercharimyces from Microbeatlas

Aquatic Samples	45
Soil Samples	15
Animal Samples	39
Plant Samples	3
Total Samples	102

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12208]	Mechercharimyces asporophorigenens gene for 16S rRNA, partial sequence, strain: YM11-542 (= MBIC06487)	AB239532	1439	GenBank ENA	354240 tax ID

Availability in culture collections External links

[Ref.: #12208]

Culture collection no.

DSM 44955, MBIC 06487, YM 11-542

[Ref.: #85768]

SI-ID 281430

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Novibacillus thermophilus gen. nov., sp. nov., a Gram-staining-negative and moderately thermophilic member of the family Thermoactinomycetaceae.	Yang G, Chen J, Zhou S	Int J Syst Evol Microbiol	10.1099/ijs.0.000306	2015	*
Metabolism	Urukthapelstatin A, a novel cytotoxic substance from marine-derived Mechercharimyces asporophorigenens YM11-542. II. Physico-chemical properties and structural elucidation.	Matsuo Y, Kanoh K, Imagawa H, Adachi K, Nishizawa M, Shizuri Y	J Antibiot (Tokyo)	10.1038/ja.2007.31	2007	*
Phylogeny	Urukthapelstatin A, a novel cytotoxic substance from marine-derived Mechercharimyces asporophorigenens YM11-542. I. Fermentation, isolation and biological activities.	Matsuo Y, Kanoh K, Yamori T, Kasai H, Katsuta A, Adachi K, Shin-Ya K, Shizuri Y	J Antibiot (Tokyo)	10.1038/ja.2007.30	2007	*
Phylogeny	Mechercharimyces mesophilus gen. nov., sp. nov. and Mechercharimyces asporophorigenens sp. nov., antitumour substance-producing marine bacteria, and description of Thermoactinomycetaceae fam. nov.	Matsuo Y, Katsuta A, Matsuda S, Shizuri Y, Yokota A, Kasai H	Int J Syst Evol Microbiol	10.1099/ijs.0.64223-0	2006	*

References

#12208

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44955

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85768

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID281430.1 )

* These data were automatically processed and therefore are not curated

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