Name: Deinococcus radiopugnans JCM 18581
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162267

Type strain:

Species: Deinococcus radiopugnans

Culture col. no.: JCM 18581, KCTC 33033, LMG 30469

Strain history: M. K. Kim DY59.

NCBI tax ID(s): 57497 (species)

Other strains from Deinococcus radiopugnans

D. radiopugnans DSM 12027, ATCC 19172, JCM 16872, ... (type strain)
D. radiopugnans STI07175(IMET), Hirsch604, IMET ...

Section

Deinococcus radiopugnans JCM 18581 is a mesophilic bacterium that was isolated from Soil collected from the mountain Deogyusan.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Deinococcales*
	Family	*Deinococcaceae*
	Genus	*Deinococcus*
	Species	**Deinococcus radiopugnans**
	Full Scientific Name (LPSN)	Deinococcus radiopugnans Brooks and Murray 1981

Synonym

Deinococcus swuensis

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil collected from the mountain Deogyusan
[Ref.: #67770]	Geographic location (country and/or sea, region)	Jeonbuk Province
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JQ991923 (>99% sequence identity) for Deinococcus from Microbeatlas

Aquatic Samples	350
Soil Samples	115
Animal Samples	941
Plant Samples	153
Total Samples	1559

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Deinococcus swuensis strain DY59 16S ribosomal RNA gene, partial sequence	JQ991923	1360	ENA	57497 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Deinococcus radiopugnans DY59	GCA_000800395	complete	GenBank	57497 tax ID

[Ref.: #67770]

GC-content

66.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18581, KCTC 33033, LMG 30469

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil.	Lee JJ, Lee HJ, Jang GS, Yu JM, Cha JY, Kim SJ, Lee EB, Kim MK	J Microbiol	10.1007/s12275-013-3023-y	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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