Deinococcus puniceus (KCTC 33027, JCM 18576)

Name: Deinococcus puniceus (KCTC 33027, JCM 18576)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162266

Type strain

Culture col. no. KCTC 33027 JCM 18576

NCBI tax ID(s) 1182568

Special Collections JCM KCTC

History JCM <-- M. K. Kim DY1.

Links

Deinococcus puniceus JCM 18576 is a bacterium that was isolated from Soil collected from the mountain of Deogyusan in South Korea and irradiated with 5 kGy gamma radiation.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 24834

KCTC 33027,JCM 18576

@ref 20215

Last LPSN update 2026-05-29 08:44:53

Domain Bacteria

Phylum Deinococcota

Class Deinococci

Order Deinococcales

Family Deinococcaceae

Genus Deinococcus

Species Deinococcus puniceus

Full scientific name Deinococcus puniceus Lee et al. 2017

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		98.277

Isolation, sampling and environmental information

Isolation

67770

Sample typeSoil collected from the mountain of Deogyusan in South Korea and irradiated with 5 kGy gamma radiation

Taxonmaps

69479

Global distribution of 16S sequence JQ991920 (>99% sequence identity) for Deinococcus puniceus subclade from Microbeatlas

Aquatic Samples	195
Soil Samples	105
Animal Samples	460
Plant Samples	39
Total Samples	799

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
67770	ASM164456v1 assembly for Deinococcus puniceus DY1	complete	GCA_001644565	2773857793	1182568	98.73

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Deinococcus puniceus strain DY1 16S ribosomal RNA gene, partial sequence	JQ991920	1393		1182568

GC content

@ref	GC-content (mol%)	Method
67770	58.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM164456v1 assembly for Deinococcus puniceus DY1
NCBI: GCA_001644565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.42	no
125439	gram_stain	BacteriaNetⓘ	negative	79.61	no
125439	spore_formation	BacteriaNetⓘ	no	98.28	no
125439	motility	BacteriaNetⓘ	yes	51.34	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Deinococcus puniceus sp. nov., a bacterium isolated from soil-irradiated gamma radiation.	Lee JJ, Srinivasan S, Lim S, Joe M, Im S, Kim MK	Curr Microbiol	10.1007/s00284-014-0748-8	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Deinococcus puniceus (KCTC 33027, JCM 18576)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_001644565

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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