Name: Deinococcus puniceus JCM 18576
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162266

Type strain:

Species: Deinococcus puniceus

Culture col. no.: JCM 18576, KCTC 33027

Strain history: M. K. Kim DY1.

NCBI tax ID(s): 1182568 (species)

Section

Deinococcus puniceus JCM 18576 is a mesophilic bacterium that was isolated from Soil collected from the mountain of Deogyusan in South Korea and irradiated with 5 kGy gamma radiation.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Deinococcales*
	Family	*Deinococcaceae*
	Genus	*Deinococcus*
	Species	**Deinococcus puniceus**
	Full Scientific Name (LPSN)	Deinococcus puniceus Lee et al. 2017

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil collected from the mountain of Deogyusan in South Korea and irradiated with 5 kGy gamma radiation
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JQ991920 (>99% sequence identity) for Deinococcus puniceus subclade from Microbeatlas

Aquatic Samples	195
Soil Samples	105
Animal Samples	460
Plant Samples	39
Total Samples	799

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Deinococcus puniceus strain DY1 16S ribosomal RNA gene, partial sequence	JQ991920	1393	ENA	1182568 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Deinococcus puniceus DY1	GCA_001644565	complete	GenBank	1182568 tax ID

[Ref.: #67770]

GC-content

58.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18576, KCTC 33027

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Deinococcus puniceus sp. nov., a bacterium isolated from soil-irradiated gamma radiation.	Lee JJ, Srinivasan S, Lim S, Joe M, Im S, Kim MK	Curr Microbiol	10.1007/s00284-014-0748-8	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Deinococcus puniceus in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF