Name: Thiomicrospira sp. V2501
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160491

Type strain:

Species: Thiomicrospira sp.

Strain Designation: V2501

Culture col. no.: DSM 25470

Strain history: <- S. Shimizu, Horonobe RISE; V2501 <- S. Shimizu {2010}

NCBI tax ID(s): 935 (species)

SI-ID 397115

DSM 25470

Other strains from Thiomicrospira sp.

T. sp. Art-3, DSM 13189
T. sp. Milos-T1, DSM 13190
T. sp. MA2-6, DSM 13155
T. sp. SL-1, DSM 13163
T. sp. JB-B2, DSM 13164
T. sp. JB-A1f, DSM 13169
T. sp. Milos-T2, DSM 13229

Section

Thiomicrospira sp. V2501 is a mesophilic bacterium that was isolated from terrestrial subsurface groundwater.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Beggiatoales*
	Family	*Piscirickettsiaceae*
	Genus	*Thiomicrospira*
	Full Scientific Name (LPSN)	Thiomicrospira Kuenen and Veldkamp 1972 (Approved Lists 1980)

	Synonym	Thialkalimicrobium
	Synonym	Thioalkalimicrobium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67399]

Culture medium

THIOMICROSPIRA SP. MEDIUM (DSMZ Medium 1734)

[Ref.: #67399]

Culture medium growth

[Ref.: #67399]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #67399]			growth	30 °C

[Ref.: #67399]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67399]	Sample type/isolated from	terrestrial subsurface groundwater
[Ref.: #67399]	Geographic location (country and/or sea, region)	Hokkaido
[Ref.: #67399]	Country	Japan
[Ref.: #67399]	Country ISO 3 Code	JPN
[Ref.: #67399]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB634592 (>99% sequence identity) for Thiomicrospira from Microbeatlas

Aquatic Samples	63
Soil Samples	16
Animal Samples	18
Plant Samples
Total Samples	97

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67399]	Thiomicrospira sp. V2501 gene for 16S rRNA, partial sequence	AB634592	1492	ENA	1035585 tax ID

Availability in culture collections External links

[Ref.: #67399]

Culture collection no.

DSM 25470

[Ref.: #112735]

SI-ID 397115

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67399

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25470

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#112735

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397115.1 )

* These data were automatically processed and therefore are not curated

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