Name: Thiomicrospira sp. Milos-T1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11917

Type strain:

Species: Thiomicrospira sp.

Strain Designation: Milos-T1

Culture col. no.: DSM 13190

Strain history: <- J. Küver, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; Milos-T1 <- S. M. Sievert {1998}

NCBI tax ID(s): 935 (species)

SI-ID 49432

DSM 13190

Special Collections

DSMZ

Other strains from Thiomicrospira sp.

Section

Thiomicrospira sp. Milos-T1 is a Gram-negative bacterium that was isolated from marine shallow-water hydrothermal vent.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Beggiatoales*
	Family	*Piscirickettsiaceae*
	Genus	*Thiomicrospira*
	Full Scientific Name (LPSN)	Thiomicrospira Kuenen and Veldkamp 1972 (Approved Lists 1980)

	Synonym	Thialkalimicrobium
	Synonym	Thioalkalimicrobium

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4859]

Culture medium

THIOMICROSPIRA PELOPHILA MEDIUM (DSMZ Medium 142)

[Ref.: #4859]

Culture medium growth

[Ref.: #4859]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4859]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4859]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %93.762

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4859]	Sample type/isolated from	marine shallow-water hydrothermal vent
[Ref.: #4859]	Geographic location (country and/or sea, region)	Milos Island
[Ref.: #4859]	Country	Greece
[Ref.: #4859]	Country ISO 3 Code	GRC
[Ref.: #4859]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Marine
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thiomicrospira sp. Milos-T1	90813.3	wgs	PATRIC	90813 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thiomicrospira sp. Milos-T1 PATRIC: 90813.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	99.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	77.869	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	52.506	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	93.762	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.419	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	75.059	no

Availability in culture collections External links

[Ref.: #4859]

Culture collection no.

DSM 13190

[Ref.: #81131]

SI-ID 49432

References

#4859

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13190

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#81131

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49432.1 )

* These data were automatically processed and therefore are not curated

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