Name: Streptomyces termitum L.C. 620
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16040

Type strain:

Species: Streptomyces termitum

Strain Designation: L.C. 620

Culture col. no.: DSM 40329, ATCC 25499, CBS 959.69, IFO 13087, ISP 5329, NBRC 13087, RIA 1279, JCM 4518, BCRC 12592, CGMCC 4.1781, IMET 43127, NCIMB 9980, NRRL B-3804

Strain history: KCC S-0518 <-- IFO 13087 <-- SAJ <-- ISP 5329 <-- LCP 620.

NCBI tax ID(s): 67368 (species)

SI-ID 45760

ATCC 25499, IFO 13087, DSM 40329, JCM 4518, CCRC 12592, IMET 43127, NCIMB 9980, NRRL B-3804, CBS 959.69, NBRC 13087, BCRC 12592, NCIB 9980, CGMCC 4.1781, LMG 20289

Other strains from Streptomyces termitum

S. termitum STI07766(IMET), GT19942006, IFO ...
S. termitum ST027975(HKI),

Section

Streptomyces termitum L.C. 620 is a spore-forming, mesophilic bacterium that was isolated from bodies of termites.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces termitum**
	Full Scientific Name (LPSN)	Streptomyces termitum Duché et al. 1951 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %93.933

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9263]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9263]

Culture medium growth

[Ref.: #9263]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9263]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9263]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9263]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9263]	Sample type/isolated from	bodies of termites

[Ref.: #67770]	Sample type/isolated from	Bodies of termite
* marker position based on {}

Isolation sources categories

#Host

#Other

#Decomposing animal

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9263]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces termitum gene for 16S rRNA, partial sequence	AB122742	564	ENA	67368 tax ID	*
[Ref.: #20218]	Streptomyces termitum gene for 16S ribosomal RNA, partial sequence, strain: JCM 4518	D44206	120	ENA	67368 tax ID	*
[Ref.: #20218]	Streptomyces termitum gene for 16S rRNA, partial sequence, strain: NBRC 13087	AB184302	1473	ENA	67368 tax ID	*
[Ref.: #20218]	Streptomyces termitum strain NRRL B-3804 16S ribosomal RNA gene, partial sequence	EF178672	1420	ENA	67368 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces termitum JCM 4518	GCA_014650175	contig	GenBank	67368 tax ID	*
[Ref.: #66792]	Streptomyces termitum strain JCM 4518	67368.3	wgs	PATRIC	67368 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces termitum strain JCM 4518 PATRIC: 67368.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces termitum strain JCM 4518 PATRIC: 67368.3
[Ref.: #69480]	gram-positive	yes	88.191	no
[Ref.: #69480]	anaerobic	no	99.201	no
[Ref.: #69480]	halophile	no	93.72	no
[Ref.: #69480]	spore-forming	yes	90.946	no
[Ref.: #69480]	glucose-util	yes	90.682	no
[Ref.: #69480]	thermophile	no	98.253	yes
[Ref.: #69480]	flagellated	no	97.692	no
[Ref.: #69480]	aerobic	yes	89.372	no
[Ref.: #69480]	glucose-ferment	no	84.912	no
[Ref.: #69480]	motile	no	95.234	no

Availability in culture collections External links

[Ref.: #9263]

Culture collection no.

DSM 40329, ATCC 25499, CBS 959.69, IFO 13087, ISP 5329, NBRC 13087, RIA 1279, JCM 4518, BCRC 12592, CGMCC 4.1781, IMET 43127, NCIMB 9980, NRRL B-3804

[Ref.: #85113]

SI-ID 45760

References

#9263

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40329

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85113

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45760.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces termitum strain JCM 4518

Streptomyces termitum strain JCM 4518

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