Name: Streptomyces thermodiastaticus DSM 40573
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16041

Type strain:

Species: Streptomyces thermodiastaticus

Culture col. no.: DSM 40573, ATCC 27472, CBS 769.72, CUB 387, IFO 13468, IFO 16608, ISP 5573, NBRC 100020, NBRC 13468, NBRC 16608, RIA 1429, JCM 4840, BCRC 12492, BCRC 12636, CGMCC 4.1759, HUT 6606, IFO 16689, NBRC 16689, NRRL B-5316

Strain history: KCC S-0840 <-- IFO 13468 <-- SAJ <-- ISP 5573 <-- CUB 387 <-- J. R. Denison.

NCBI tax ID(s): 44061 (species)

SI-ID 389349

ATCC 27472, IFO 13468, IFO 16617, DSM 40573, IFO 16608, JCM 4840, CCRC 12492, CCRC 12636, HUT 6606, NRRL B-5316, IFO 16689, NBRC 100020, NBRC 13468, NBRC 16689, BCRC 12636, NBRC 16608, BCRC 12492, CGMCC 4.1759, CBS 769.72

Other strains from Streptomyces thermodiastaticus

S. thermodiastaticus NAR 85, DSM 41740
S. thermodiastaticus JCM 4314

Section

Streptomyces thermodiastaticus DSM 40573 is a spore-forming, thermophilic bacterium of the family Streptomycetaceae.

spore-forming
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces thermodiastaticus**
	Full Scientific Name (LPSN)	Streptomyces thermodiastaticus (Bergey et al. 1923) Waksman 1953 (Approved Lists 1980)

Synonym

"Actinomyces thermodiastaticus"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %91.698

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	45 °C

[Ref.: #67770]

Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9654]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	S.thermodiastaticus 16S rRNA gene	Z68101	1483	ENA	44061 tax ID	*
[Ref.: #20218]	Streptomyces thermodiastaticus gene for 16S rRNA, partial sequence, strain: JCM 4840, clone 121	AB018095	1529	ENA	44061 tax ID	*
[Ref.: #20218]	Streptomyces thermodiastaticus gene for 16S rRNA, partial sequence, strain: JCM 4840, clone 123	AB018096	1529	ENA	44061 tax ID	*
[Ref.: #20218]	Streptomyces thermodiastaticus gene for 16S rRNA, partial sequence, strain: NBRC 100020	AB249928	1482	ENA	44061 tax ID	*
[Ref.: #20218]	Streptomyces thermodiastaticus gene for 16S rRNA, partial sequence, strain: NBRC 13468	AB184426	1480	ENA	44061 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces thermodiastaticus JCM 4840	GCA_014656135	scaffold	GenBank	44061 tax ID	*
[Ref.: #66792]	Streptomyces thermodiastaticus strain JCM 4840	44061.4	wgs	PATRIC	44061 tax ID	*
[Ref.: #66792]	Streptomyces thermodiastaticus DSM 40573	2928337282	draft	JGI IMG/M	44061 tax ID	*
[Ref.: #66792]	Streptomyces thermodiastaticus DSM 40573	GCA_021394575	contig	GenBank	44061 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces thermodiastaticus JCM 4840 NCBI: GCA_014656135.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces thermodiastaticus JCM 4840 NCBI: GCA_014656135.1
[Ref.: #69480]	flagellated	no	98.468	no
[Ref.: #69480]	gram-positive	yes	91.98	no
[Ref.: #69480]	anaerobic	no	98.848	no
[Ref.: #69480]	aerobic	yes	91.896	no
[Ref.: #69480]	halophile	no	92.396	no
[Ref.: #69480]	spore-forming	yes	96.356	no
[Ref.: #69480]	glucose-util	yes	88.253	no
[Ref.: #69480]	thermophile	yes	53.079	yes
[Ref.: #69480]	motile	no	93.971	no
[Ref.: #69480]	glucose-ferment	no	89.993	no

Availability in culture collections External links

[Ref.: #9654]

Culture collection no.

DSM 40573, ATCC 27472, CBS 769.72, CUB 387, IFO 13468, IFO 16608, ISP 5573, NBRC 100020, NBRC 13468, NBRC 16608, RIA 1429, JCM 4840, BCRC 12492, BCRC 12636, CGMCC 4.1759, HUT 6606, IFO 16689, NBRC 16689, NRRL B-5316

[Ref.: #85114]

SI-ID 389349

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces thermocarboxydovorans sp. nov. and Streptomyces thermocarboxydus sp. nov., two moderately thermophilic carboxydotrophic species from soil.	Kim SB, Falconer C, Williams E, Goodfellow M	Int J Syst Bacteriol	10.1099/00207713-48-1-59	1998	*

References

#9654

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40573

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85114

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389349.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces thermodiastaticus JCM 4840

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