Name: Actinophytocola glycyrrhizae KCTC 49002
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159716

Type strain:

Species: Actinophytocola glycyrrhizae

Culture col. no.: KCTC 49002, CGMCC 4.7433, BMP B8152, JCM 33402

Strain history: CGMCC 4.7433 <-- J. Jiang; Jiangsu Normal Univ., China; BMP B8152.

NCBI tax ID(s): 2044873 (species)

Section

Actinophytocola glycyrrhizae KCTC 49002 is an aerobe, spore-forming, mesophilic bacterium that was isolated from From soil.

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinophytocola*
	Species	**Actinophytocola glycyrrhizae**
	Full Scientific Name (LPSN)	Actinophytocola glycyrrhizae Cao et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66608]	Gram stain	positive

[Ref.: #66608]	Motility	no

[Ref.: #66608]	Multicellular complex forming ability	yes
[Ref.: #66608]	Multicellular complex further description	Non-fragmented substrate mycelium develops well, and aerial mycelium fragments into rodshaped spores.

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66608]

Culture medium

Czapek's agar

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

ISP 2

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

ISP 3

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

ISP 4

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

ISP 5

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

Nutrient agar (NA)

[Ref.: #66608]

Culture medium growth

[Ref.: #66608]

Culture medium

potato dextrose agar

[Ref.: #66608]

Culture medium growth

		Temperature
[Ref.: #66608]	optimum	28 °C
[Ref.: #66608]	growth	15-30 °C
[Ref.: #67770]	growth	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #66608]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #66608]			optimum	7
[Ref.: #66608]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66608]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #66608]	Type of spore	spore
[Ref.: #66608]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66608]		NaCl		growth	0-2	%(w/v)
[Ref.: #66608]		NaCl		optimum	0-1	%(w/v)

[Ref.: #66608]	Observation	BMP B8152T grew well on ISP 3, PDA, nutrient agar and ISP 2 media, with yellowish white to gray yellow aerial mycelium, but weakly on ISP 4, ISP 5 and Czapek's agar, with light gray aerial mycelium
[Ref.: #67770]	Observation	quinones: MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66608]	casein	+	hydrolysis
[Ref.: #66608]	cellobiose ChEBI	+	assimilation
[Ref.: #66608]	D-galactose ChEBI	+	assimilation
[Ref.: #66608]	D-mannose ChEBI	+	assimilation
[Ref.: #66608]	D-xylose ChEBI	+	assimilation
[Ref.: #66608]	gelatin ChEBI	+	hydrolysis
[Ref.: #66608]	L-arabinose ChEBI	+	assimilation
[Ref.: #66608]	L-arginine ChEBI	+	assimilation
[Ref.: #66608]	L-asparagine ChEBI	+	assimilation
[Ref.: #66608]	L-histidine ChEBI	+	assimilation
[Ref.: #66608]	L-methionine ChEBI	+	assimilation
[Ref.: #66608]	L-serine ChEBI	+	assimilation
[Ref.: #66608]	L-sorbose ChEBI	+	assimilation
[Ref.: #66608]	L-tyrosine ChEBI	+	assimilation
[Ref.: #66608]	milk	-	assimilation
[Ref.: #66608]	nitrate ChEBI	+	reduction
[Ref.: #66608]	starch ChEBI	+	hydrolysis
[Ref.: #66608]	urea ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66608]		hydrogen sulfide ChEBI	no

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #66608]		catalase	+	1.11.1.6
[Ref.: #66608]		cytochrome oxidase	-	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67771]	Sample type/isolated from	From soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	Xinjiang
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #66608]	Sample type/isolated from	rhizosphere of Glycyrrhiza inflata collected ashore
[Ref.: #66608]	Host species	Glycyrrhiza inflata
[Ref.: #66608]	Geographic location (country and/or sea, region)	Kashi, Xinjiang province
[Ref.: #66608]	Country	China
[Ref.: #66608]	Country ISO 3 Code	CHN
[Ref.: #66608]	Continent	Asia
[Ref.: #66608]	Geographic location	38.4333°/75.0333°
[Ref.: #66608]	Enrichment culture	ISP3
[Ref.: #66608]	Enrichment culture composition	supplemented with following antibiotics (l-1): 20 mg nalidixic acid, 10 mg cycloheximide and 10 mg nystatin.
[Ref.: #66608]	Enrichment culture duration	28 days
[Ref.: #66608]	Enrichment culture temperature	28 ̊C

[Ref.: #67770]	Sample type/isolated from	Rhizosphere of Glycyrrhiza inflata
[Ref.: #67770]	Host species	Glycyrrhiza inflata
[Ref.: #67770]	Geographic location (country and/or sea, region)	Kashi, Xinjiang Province, northwest China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66608]	Actinophytocola sp. BMP B8152 16S ribosomal RNA gene, partial sequence	MG190031	1513	ENA	2044873 tax ID

[Ref.: #66608]

GC-content

70.2 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #66608]

Culture collection no.

KCTC 49002, CGMCC 4.7433, BMP B8152, JCM 33402

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinophytocola glycyrrhizae sp. nov. isolated from the rhizosphere of Glycyrrhiza inflata.	Cao C, Sun Y, Wu B, Zhao S, Yuan B, Qin S, Jiang J, Huang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.002864	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66608

Chengliang Cao, Yong Sun, Bo Wu, Shuai Zhao, Bo Yuan, Sheng Qin, Jihong Jiang, Ying Huang: Actinophytocola glycyrrhizae sp. nov. isolated from the rhizosphere of Glycyrrhiza inflata. IJSEM 68: 2504 - 2508 2018 ( DOI 10.1099/ijsem.0.002864 , PubMed 29939121 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Actinophytocola glycyrrhizae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF