Paenibacillus larvae (DSM 106052, Eric V)

Name: Paenibacillus larvae (DSM 106052, Eric V)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159485

Type strain

Strain Designation Eric V

Culture col. no. DSM 106052 Eric V

NCBI tax ID(s) 1464

Special Collections DSMZ

History DSMZ <- H. Beims, Niedersächsisches Landesamt für Verbraucherschutz und Lebensmittelsicherheit, Inst. für Bienenkunde, Celle, Germany; Eric V <- TU Braunschweig, Germany

Links

Paenibacillus larvae Eric V is an animal pathogen that was isolated from honey.

animal pathogen genome sequence Bacteria

Name and taxonomic classification

SI-ID 401619

DSM 106052

@ref 20215

Last LPSN update 2026-05-29 08:44:12

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus larvae

Full scientific name Paenibacillus larvae (White 1906) Ash et al. 1994

Synonyms (4)

Bacillus larvae
Paenibacillus pulvifaciens
Bacillus pulvifaciens
Paenibacillus larvae subsp. pulvifaciens

BacDive ID	Other strains from **Paenibacillus larvae** (46)	Type strain
11592	P. larvae Med-540, 846, CCUG 28515, CIP 104618, DSM ... (type strain)
11591	P. larvae 670, NRS-1508, DSM 3615, ATCC 49843, LMG ...
11595	P. larvae 03-522, DSM 16115
11596	P. larvae 03-525w, DSM 16116
11597	P. larvae 01-000, RSK 16, DSM 17237
23176	P. larvae 03-189, DSM 25429
23177	P. larvae 04-309, DSM 25430
24275	P. larvae 08-100, DSM 25719
134768	P. larvae CIP 61.15
135626	P. larvae CIP 61.18
135768	P. larvae CIP 61.16
137479	P. larvae CIP 58.11
137671	P. larvae NRS-1285, CIP 53.150, NCDO 1155
138111	P. larvae NRS-1284, CIP 53.139, NCDO 1141
138134	P. larvae NRS-1283, CCUG 7427, CCM 38, CIP 53.151, ...
138880	P. larvae CIP 61.17
138881	P. larvae CIP 61.19
152344	P. larvae CCUG 46476
153263	P. larvae CCUG 48972
153264	P. larvae CCUG 48973
153265	P. larvae CCUG 48974
153266	P. larvae CCUG 48975, NRRL B-3687, LMG 16247
153267	P. larvae CCUG 48976
153268	P. larvae CCUG 48977
153269	P. larvae CCUG 48978
153270	P. larvae CCUG 48979
153271	P. larvae CCUG 48980
153272	P. larvae CCUG 48981
153273	P. larvae CCUG 48982
153274	P. larvae CCUG 48983
153275	P. larvae CCUG 48984
153276	P. larvae CCUG 48985
153277	P. larvae CCUG 48986
153278	P. larvae CCUG 48987
153279	P. larvae CCUG 48988
153280	P. larvae CCUG 48989
153381	P. larvae CCUG 49392 A
153382	P. larvae CCUG 49392 B
153383	P. larvae CCUG 49393 A
153384	P. larvae CCUG 49393 B
153385	P. larvae CCUG 49406 A
153386	P. larvae CCUG 49406 B
153387	P. larvae CCUG 49406 C
153455	P. larvae CCUG 49660 A
153456	P. larvae CCUG 49660 B
153743	P. larvae CCUG 50846, NRRL NRS-1684, DSM 8443, LMG ...

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66308	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)
66308	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	94.696

Spore formation

@ref	Spore formation	Confidence
125438		91.094

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Sugary food
#Engineered	#Food production	#Animal feed
#Host	#Arthropoda	#Insecta
#Host Body Product	#Other	#Animal produced food (natural)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66308	honey	Herrera del Duque	Spain	ESP	Europe

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
66308	yes, in single cases		1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	PaenibacERICV_HGAP3_2SC assembly for Paenibacillus larvae subsp. larvae Eric_V	complete	GCA_011220525	147375.10	147375	99.21

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: PaenibacERICV_HGAP3_2SC assembly for Paenibacillus larvae subsp. larvae Eric_V
NCBI: GCA_011220525

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.70	no
125439	motility	BacteriaNetⓘ	yes	75.11	no
125439	gram_stain	BacteriaNetⓘ	variable	65.04	no
125439	spore_formation	BacteriaNetⓘ	yes	89.76	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus larvae subsp. larvae Eric_V
NCBI: GCA_011220525.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	66.60	no
125438	anaerobic	anaerobicⓘ	no	91.82	no
125438	aerobic	aerobicⓘ	yes	54.68	no
125438	spore-forming	spore-formingⓘ	yes	91.09	no
125438	thermophilic	thermophileⓘ	no	86.24	no
125438	flagellated	motile2+ⓘ	yes	80.34	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Characterization of CRISPR Spacer and Protospacer Sequences in Paenibacillus larvae and Its Bacteriophages.	Stamereilers C, Wong S, Tsourkas PK.	Viruses	10.3390/v13030459	2021
	Analysis of intact prophages in genomes of Paenibacillus larvae: An important pathogen for bees.	Ribeiro HG, Nilsson A, Melo LDR, Oliveira A.	Front Microbiol	10.3389/fmicb.2022.903861	2022
Genetics	ERIC and WGS Typing of Paenibacillus larvae in Slovenia: Investigation of ERIC I Outbreaks.	Zugelj A, Papic B, Zdovc I, Zajc U, Golob M, Avbersek J, Kusar D.	Insects	10.3390/insects12040362	2021
Metabolism	The Buzz about ADP-Ribosylation Toxins from Paenibacillus larvae, the Causative Agent of American Foulbrood in Honey Bees.	Ebeling J, Funfhaus A, Genersch E.	Toxins (Basel)	10.3390/toxins13020151	2021
Genetics	Discovery of Paenibacillus larvae ERIC V: Phenotypic and genomic comparison to genotypes ERIC I-IV reveal different inventories of virulence factors which correlate with epidemiological prevalences of American Foulbrood.	Beims H, Bunk B, Erler S, Mohr KI, Sproer C, Pradella S, Gunther G, Rohde M, von der Ohe W, Steinert M	Int J Med Microbiol	10.1016/j.ijmm.2020.151394	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66308	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106052
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus larvae (DSM 106052, Eric V)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_011220525

Genome-based predictions

Predictions

Literature

Literature

References

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