Eggerthella lenta (DSM 110916, CC8/2 BHI2)

Name: Eggerthella lenta (DSM 110916, CC8/2 BHI2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158974

Type strain

Strain Designation CC8/2 BHI2

Culture col. no. DSM 110916 CC8/2 BHI2

NCBI tax ID(s) 84112

Special Collections DSMZ DZIF

History <- J. Bisanz and P. J. Turnbaugh, University of California, San Francisco, USA; CC8/2 BHI2

Links

Eggerthella lenta CC8/2 BHI2 is a human pathogen that was isolated from Colon Biopsy .

human pathogen genome sequence Bacteria

Name and taxonomic classification

SI-ID 406220

DSM 110916

@ref 20215

Last LPSN update 2026-02-09 11:38:28

Domain Bacteria

Phylum Actinomycetota

Class Coriobacteriia

Order Eggerthellales

Family Eggerthellaceae

Genus Eggerthella

Species Eggerthella lenta

Full scientific name Eggerthella lenta (Eggerth 1935) Wade et al. 1999

Synonyms (3)

Eubacterium lentum
Eggerthella lenta
"Bacteroides lentus"

BacDive ID	Other strains from **Eggerthella lenta** (66)	Type strain
3054	E. lenta 1899 B, CCUG 17323 A, DSM 2243, ATCC 25559, ... (type strain)
3055	E. lenta MSMC 77-67, DSM 15644, ATCC 43055, CCUG 34779, ...
147535	E. lenta CCUG 33760
148972	E. lenta CCUG 36662
150615	E. lenta CCUG 41760
151045	E. lenta CCUG 43153
151060	E. lenta CCUG 43187
151298	E. lenta CCUG 43682
151956	E. lenta CCUG 45342 C
152022	E. lenta CCUG 45577 A
152098	E. lenta CCUG 45737
152100	E. lenta CCUG 45762
152218	E. lenta CCUG 46141
152391	E. lenta CCUG 46647
152419	E. lenta CCUG 46751
152542	E. lenta CCUG 47030
153093	E. lenta CCUG 48467
153207	E. lenta CCUG 48755
153218	E. lenta CCUG 48783
153311	E. lenta CCUG 49066
153520	E. lenta CCUG 50030
153880	E. lenta CCUG 51488
153951	E. lenta CCUG 51738
154043	E. lenta CCUG 52118
154480	E. lenta CCUG 53778
154600	E. lenta CCUG 54550
154638	E. lenta CCUG 54678
154649	E. lenta CCUG 54751
154730	E. lenta CCUG 55004
155569	E. lenta CCUG 58169
155751	E. lenta CCUG 59206
155771	E. lenta CCUG 59263
155822	E. lenta CCUG 59395
156177	E. lenta CCUG 60629
156247	E. lenta CCUG 60856
156248	E. lenta CCUG 60857
156407	E. lenta CCUG 61595
156486	E. lenta CCUG 62015
158962	E. lenta FAA 1-1-60A, FAA 1-1-60AUCSF, DSM 110904
158963	E. lenta 11C, DSM 110905
158964	E. lenta FAA 1-3-56, DSM 110906
158965	E. lenta 14A, DSM 110907
158966	E. lenta 22C, DSM 110908
158967	E. lenta 28B, DSM 110909
158968	E. lenta 32-6-I-6 NA, DSM 110910
158969	E. lenta A2, DSM 110911
158970	E. lenta AB12 #2, DSM 110912
158971	E. lenta AB8 #2, DSM 110913
158972	E. lenta AN51LG, DSM 110914
158973	E. lenta CC7/5 D5 2, DSM 110915
158975	E. lenta CC8/6 D5 4, DSM 110917
158976	E. lenta RJX1626, DSM 110918
158977	E. lenta ElUC2, DSM 110919
158978	E. lenta ElUC5, DSM 110920
158979	E. lenta MR1 #12, DSM 110921
158980	E. lenta RC4/6F, DSM 110922
158981	E. lenta W1 BHI 6, DSM 110923
158982	E. lenta OB21 GAM31, DSM 110928
161029	E. lenta JCM 10763
161030	E. lenta JCM 10764
161031	E. lenta JCM 10765
161032	E. lenta JCM 10766
161033	E. lenta JCM 10767
161034	E. lenta JCM 10768
161035	E. lenta JCM 10769
161037	E. lenta JCM 10771

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65797	BHI MEDIUM (DSMZ Medium 215)		Medium recipe at MediaDive	Name: BHI MEDIUM (DSMZ Medium 215; with strain-specific modifications) Composition: Brain heart infusion 37.0 g/l Arginine 10.0 g/l Distilled water
65797	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)
65797	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	anaerobe	91.645

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68367	17057 ChEBI	cellobiose	-	builds acid from	from API 20A
68367	17634 ChEBI	D-glucose	-	builds acid from	from API 20A
68367	16899 ChEBI	D-mannitol	-	builds acid from	from API 20A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68367	16024 ChEBI	D-mannose	-	builds acid from	from API 20A
68367	65327 ChEBI	D-xylose	-	builds acid from	from API 20A
68367	4853 ChEBI	esculin	-	hydrolysis	from API 20A
68367	5291 ChEBI	gelatin	-	hydrolysis	from API 20A
68367	17754 ChEBI	glycerol	-	builds acid from	from API 20A
68367	30849 ChEBI	L-arabinose	-	builds acid from	from API 20A
68380	29985 ChEBI	L-glutamate	+	degradation	from API rID32A
68367	62345 ChEBI	L-rhamnose	-	builds acid from	from API 20A
68367	17716 ChEBI	lactose	-	builds acid from	from API 20A
68367	17306 ChEBI	maltose	-	builds acid from	from API 20A
68367	6731 ChEBI	melezitose	-	builds acid from	from API 20A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68367	16634 ChEBI	raffinose	-	builds acid from	from API 20A
68367	17814 ChEBI	salicin	-	builds acid from	from API 20A
68367	30911 ChEBI	sorbitol	-	builds acid from	from API 20A
68367	17992 ChEBI	sucrose	-	builds acid from	from API 20A
68367	27082 ChEBI	trehalose	-	builds acid from	from API 20A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68367	27897 ChEBI	tryptophan	-	energy source	from API 20A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A
68367	16199 ChEBI	urea	-	hydrolysis	from API 20A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
68367	35581 ChEBI	indole		from API 20A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A
68367	35581 ChEBI	indole	-	from API 20A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68367	beta-glucosidase	-	3.2.1.21	from API 20A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68367	gelatinase	-		from API 20A
68380	glutamate decarboxylase	+	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A
68367	urease	-	3.5.1.5	from API 20A

API 20A

@ref	IND	URE	GLU	MAN	LAC	SAC	MAL	SAL	XYL	ARA	GEL	ESC	GLY	CEL	MNE	MLZ	RAF	SOR	RHA	TRE	CAT	Spores presentSPOR	GramGRAM	Morphology coccus="+" rod="-"COCC
65797	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
65797	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	#Biopsy
#Host Body-Site	#Gastrointestinal tract	#Large intestine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
65797	Colon Biopsy (Sigmoid Colon)	Vancouver, British Columbia	Canada	CAN	North America

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
65797			2	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM334007v1 assembly for Eggerthella lenta CC8/2 BHI2	scaffold	GCA_003340075	84112.18	84112	66.53

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Eggerthella lenta CC8/2 BHI2
NCBI: GCA_003340075.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	72.71	no
125438	anaerobic	anaerobicⓘ	yes	91.65	no
125438	aerobic	aerobicⓘ	no	93.92	no
125438	spore-forming	spore-formingⓘ	no	74.54	no
125438	thermophilic	thermophileⓘ	no	93.12	yes
125438	flagellated	motile2+ⓘ	no	74.50	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65797	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110916
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68367	Automatically annotated from API 20A .
#68380	Automatically annotated from API rID32A .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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