Name: Caballeronia mineralivorans PML1(12)
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158310

Type strain:

Species: Caballeronia mineralivorans

Strain Designation: PML1(12)

Culture col. no.: DSM 104028, LMG 2991

Strain history: <- S. Uroz, INRA UMR1136, Champenoux, France; PML1(12) <- P. Frey-Klett

NCBI tax ID(s): 2010198 (species)

SI-ID 404456

DSM 104028

Special Collections

DSMZ

Section

Caballeronia mineralivorans PML1 is a bacterium that was isolated from Ectomycorrhizosphere of oak Scleroderma citrinum sampled in the mineral soil horizon .

Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Caballeronia*
	Species	**Caballeronia mineralivorans**
	Full Scientific Name (LPSN)	Caballeronia mineralivorans Uroz and Oger 2019

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64974]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #64974]

Culture medium growth

[Ref.: #64974]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64974]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64974]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64974]	Sample type/isolated from	Ectomycorrhizosphere of oak Scleroderma citrinum sampled in the mineral soil horizon (5-110cm)
[Ref.: #64974]	Geographic location (country and/or sea, region)	Morvan, Breuil-Chenue experimental site (47° 17' 31''N, 4° 03' 54''E)
[Ref.: #64974]	Country	France
[Ref.: #64974]	Country ISO 3 Code	FRA
[Ref.: #64974]	Continent	Europe
[Ref.: #64974]	Geographic location	47.2919°/4.0650°
* marker position based on {}

Isolation sources categories

#Host	#Fungi	#Mushroom
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Tree

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Caballeronia mineralivorans PML1(12)	GCA_001028175	contig	GenBank ENA	908627 tax ID	*
[Ref.: #66792]	Caballeronia mineralivorans PML1(12)	2627853681	draft	JGI IMG/M	908627 tax ID	*

Availability in culture collections External links

[Ref.: #64974]

Culture collection no.

DSM 104028, LMG 2991

[Ref.: #111124]

SI-ID 404456

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Caballeronia mineralivorans sp. nov., isolated from oak-Scleroderma citrinum mycorrhizosphere.	Uroz S, Oger P	Syst Appl Microbiol	10.1016/j.syapm.2017.05.005	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64974

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104028

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#111124

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404456.1 )

* These data were automatically processed and therefore are not curated

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