Name: Phaeobacter inhibens P10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158073

Type strain:

Species: Phaeobacter inhibens

Strain Designation: P10, 01/009

Culture col. no.: DSM 29965

Strain history: <- H. Freese, Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; P10 <- J. L. Nicolas, Centre de Bretagne, IFREMER; 01/009

NCBI tax ID(s): 221822 (species)

SI-ID 403078

DSM 29965

Other strains from Phaeobacter inhibens

P. inhibens T5, DSM 16374, CIP 109289, LMG ... (type strain)
P. inhibens DSM 17395
P. inhibens 2.10, DSM 24588
P. inhibens CIP 109852

Section

Phaeobacter inhibens P10 is a mesophilic bacterium that was isolated from aluminum hull of sailboat.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Phaeobacter*
	Species	**Phaeobacter inhibens**
	Full Scientific Name (LPSN)	Phaeobacter inhibens Martens et al. 2006

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64647]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #64647]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #64647]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64647]			growth	25 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #64647]	24198	-	-	-	-	-	+/-	-	+	+	-	+	+	+	+	-	-	+/-	+	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64647]	Sample type/isolated from	aluminum hull of sailboat
[Ref.: #64647]	Geographic location (country and/or sea, region)	near the Ifremer centre in St Anne du Portzic port (Bay of Brest)
[Ref.: #64647]	Country	France
[Ref.: #64647]	Country ISO 3 Code	FRA
[Ref.: #64647]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Industrial

#Engineered product

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Phaeobacter inhibens P10	GCA_002888685	complete	GenBank	221822 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Phaeobacter inhibens P10 NCBI: GCA_002888685.1
[Ref.: #69480]	flagellated	no	62.405	no
[Ref.: #69480]	gram-positive	no	98.683	no
[Ref.: #69480]	anaerobic	no	98.692	no
[Ref.: #69480]	aerobic	yes	92.967	no
[Ref.: #69480]	halophile	yes	70.664	no
[Ref.: #69480]	spore-forming	no	94.468	no
[Ref.: #69480]	thermophile	no	96.757	yes
[Ref.: #69480]	glucose-util	yes	84.213	yes
[Ref.: #69480]	motile	yes	77.81	no
[Ref.: #69480]	glucose-ferment	no	91.086	yes

Availability in culture collections External links

[Ref.: #64647]

Culture collection no.

DSM 29965

[Ref.: #110916]

SI-ID 403078

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64647

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29965

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#110916

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403078.1 )

* These data were automatically processed and therefore are not curated

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