Phaeobacter inhibens (DSM 17395)

Name: Phaeobacter inhibens (DSM 17395)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13730

Type strain

Culture col. no. DSM 17395

NCBI tax ID(s) 391619 221822

Special Collections DSMZ

History <- M. Garnier, Plouzane <- C. Ruiz-Ponte

Links

Phaeobacter inhibens DSM 17395 is a bacterium that was isolated from seawater from larval cultures of scallop, Pecten maximus.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 44134

ATCC 700781,CIP 105210,IAM 14812,NCIMB 13546,LMG 19757,DSM 12440,IFO 16654,NBRC 16654,LMG 23163,DSM 17395,JCM 21319,LMG 24391,CECT 7277,DSM 26640

@ref 20215

Last LPSN update 2026-02-09 11:21:13

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Phaeobacter

Species Phaeobacter inhibens

Full scientific name Phaeobacter inhibens Martens et al. 2006

BacDive ID	Other strains from **Phaeobacter inhibens** (4)	Type strain
13731	P. inhibens T5, DSM 16374, CIP 109289, LMG 22475 (type strain)
23227	P. inhibens 2.10, DSM 24588
137017	P. inhibens CIP 109852
158073	P. inhibens P10, 01/009, DSM 29965

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.333
125439	negative	95.9

Colony morphology

6947

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6947	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
6947	Salzwassermedium (SWM) (DSMZ Medium 1827)		Medium recipe provided by DSMZ

Culture temp

@ref	Growth	Type	Temperature (°C)
6947	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.9

Spore formation

@ref	Spore formation	Confidence
125438		90.216
125439		94.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
6947	catalase	+	1.11.1.6
6947	cytochrome-c oxidase	+	1.9.3.1
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	taurine degradation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	denitrification	100	2 of 2
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	palmitate biosynthesis	100	22 of 22
66794	octane oxidation	100	3 of 3
66794	cardiolipin biosynthesis	100	7 of 7
66794	Entner Doudoroff pathway	100	10 of 10
66794	kanosamine biosynthesis II	100	2 of 2
66794	gluconeogenesis	100	8 of 8
66794	CMP-KDO biosynthesis	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	glycolate and glyoxylate degradation	100	6 of 6
66794	ppGpp biosynthesis	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	biotin biosynthesis	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	formaldehyde oxidation	100	3 of 3
66794	degradation of aromatic, nitrogen containing compounds	91.67	11 of 12
66794	vitamin B12 metabolism	91.18	31 of 34
66794	proline metabolism	90.91	10 of 11
66794	myo-inositol biosynthesis	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	pyrimidine metabolism	88.89	40 of 45
66794	serine metabolism	88.89	8 of 9
66794	NAD metabolism	88.89	16 of 18
66794	allantoin degradation	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	purine metabolism	85.11	80 of 94
66794	leucine metabolism	84.62	11 of 13
66794	phenylalanine metabolism	84.62	11 of 13
66794	vitamin B1 metabolism	84.62	11 of 13
66794	peptidoglycan biosynthesis	80	12 of 15
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	alanine metabolism	79.31	23 of 29
66794	tryptophan metabolism	78.95	30 of 38
66794	tyrosine metabolism	78.57	11 of 14
66794	glutathione metabolism	78.57	11 of 14
66794	citric acid cycle	78.57	11 of 14
66794	photosynthesis	78.57	11 of 14
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	d-mannose degradation	77.78	7 of 9
66794	sulfate reduction	76.92	10 of 13
66794	histidine metabolism	75.86	22 of 29
66794	butanoate fermentation	75	3 of 4
66794	carnitine metabolism	75	6 of 8
66794	lactate fermentation	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	phenol degradation	75	15 of 20
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	acetate fermentation	75	3 of 4
66794	flavin biosynthesis	73.33	11 of 15
66794	pentose phosphate pathway	72.73	8 of 11
66794	cysteine metabolism	72.22	13 of 18
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	glutamate and glutamine metabolism	71.43	20 of 28
66794	heme metabolism	71.43	10 of 14
66794	arginine metabolism	70.83	17 of 24
66794	4-hydroxyphenylacetate degradation	70	7 of 10
66794	oxidative phosphorylation	69.23	63 of 91
66794	methionine metabolism	69.23	18 of 26
66794	non-pathway related	68.42	26 of 38
66794	lipid metabolism	67.74	21 of 31
66794	4-hydroxymandelate degradation	66.67	6 of 9
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	methane metabolism	66.67	2 of 3
66794	IAA biosynthesis	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	lysine metabolism	66.67	28 of 42
66794	acetoin degradation	66.67	2 of 3
66794	glycolysis	64.71	11 of 17
66794	vitamin B6 metabolism	63.64	7 of 11
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	phosphatidylethanolamine bioynthesis	61.54	8 of 13
66794	urea cycle	61.54	8 of 13
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	degradation of pentoses	60.71	17 of 28
66794	3-phenylpropionate degradation	60	9 of 15
66794	hydrogen production	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	coenzyme M biosynthesis	60	6 of 10
66794	propionate fermentation	60	6 of 10
66794	propanol degradation	57.14	4 of 7
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	resorcinol degradation	50	1 of 2
66794	ketogluconate metabolism	50	4 of 8
66794	glycogen biosynthesis	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	phenylmercury acetate degradation	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	glycine metabolism	50	5 of 10
66794	bile acid biosynthesis, neutral pathway	47.06	8 of 17
66794	d-xylose degradation	45.45	5 of 11
66794	nitrate assimilation	44.44	4 of 9
66794	polyamine pathway	43.48	10 of 23
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	aclacinomycin biosynthesis	42.86	3 of 7
66794	glycine betaine biosynthesis	40	2 of 5
66794	cellulose degradation	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	degradation of sugar acids	40	10 of 25
66794	vitamin K metabolism	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	arachidonic acid metabolism	38.89	7 of 18
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	sulfoquinovose degradation	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	pantothenate biosynthesis	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	ascorbate metabolism	31.82	7 of 22
66794	starch degradation	30	3 of 10
66794	mevalonate metabolism	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	alginate biosynthesis	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	carotenoid biosynthesis	22.73	5 of 22

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
6947	-	-	-	-	-	-	-	+	+	+/-	+	+	+	+	+/-	-	+/-	+	+	+/-	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Mollusca

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6947	seawater from larval cultures of scallop, Pecten maximus	Galicia	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence KC176241 (>99% sequence identity) for Phaeobacter from Microbeatlas

Aquatic Samples	6774
Soil Samples	318
Animal Samples	295
Plant Samples	82
Total Samples	7469

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6947	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM15476v2 assembly for Phaeobacter inhibens DSM 17395	complete	GCA_000154765	391619.3	2510065029	391619	98.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Phaeobacter gallaeciensis strain NBRC16654 16S ribosomal RNA gene, partial sequence	DQ915619	1307		60890
6947	Phaeobacter inhibens strain DSM 17395 16S ribosomal RNA gene, partial sequence	KC176241	1380		221822

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Phaeobacter inhibens DSM 17395
NCBI: GCA_000154765

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	94.60	no
125439	motility	BacteriaNetⓘ	yes	72.90	no
125439	gram_stain	BacteriaNetⓘ	negative	95.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Phaeobacter inhibens DSM 17395 DSM 17395
NCBI: GCA_000154765.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.33	no
125438	anaerobic	anaerobicⓘ	no	94.67	no
125438	aerobic	aerobicⓘ	yes	82.84	no
125438	spore-forming	spore-formingⓘ	no	90.22	no
125438	thermophilic	thermophileⓘ	no	98.45	no
125438	flagellated	motile2+ⓘ	yes	71.21	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Structural and regulatory determinants of flagellar motility in Rhodobacterales-the archetypal flagellum of Phaeobacter inhibens DSM 17395.	Tomasch J, Bartling P, Vollmers J, Wohlbrand L, Jarek M, Rohde M, Brinkmann H, Freese HM, Rabus R, Petersen J.	mSystems	10.1128/msystems.00419-25	2025
	DmdA-independent lag phase shortening in Phaeobacter inhibens bacteria under stress conditions.	Narvaez-Barragan DA, Sperfeld M, Segev E.	FEBS J	10.1111/febs.70128	2025
	The impact of tropodithietic acid on microbial physiology under varying culture complexities.	Shlakhter O, Malitsky S, Segev E.	mSphere	10.1128/msphere.00138-25	2025
	Algal exudates promote conjugation in marine Roseobacters.	Duchin Rapp Y, Lipsman V, Yuda L, Kublanov IV, Matsliyah D, Segev E.	mBio	10.1128/mbio.01062-24	2024
	Increased Nutrient Levels Enhance Bacterial Exopolysaccharides Production in the Context of Algae.	Lipsman V, Segev E.	Environ Microbiol Rep	10.1111/1758-2229.70071	2025
	Biosynthesis enhancement of tropodithietic acid (TDA) antibacterial compound through biofilm formation by marine bacteria Phaeobacter inhibens on micro-structured polymer surfaces.	Droumpali A, Liu Y, Ferrer-Florensa X, Sternberg C, Dimaki M, Andersen AJC, Strube ML, Kempen PJ, Gram L, Taboryski R.	RSC Adv	10.1039/d3ra05407a	2023
	Abundant Sulfitobacter marine bacteria protect Emiliania huxleyi algae from pathogenic bacteria.	Beiralas R, Ozer N, Segev E.	ISME Commun	10.1038/s43705-023-00311-y	2023
	Fatal affairs - conjugational transfer of a dinoflagellate-killing plasmid between marine Rhodobacterales.	Tomasch J, Ringel V, Wang H, Freese HM, Bartling P, Brinkmann H, Vollmers J, Jarek M, Wagner-Dobler I, Petersen J.	Microb Genom	10.1099/mgen.0.000787	2022
	Algal methylated compounds shorten the lag phase of Phaeobacter inhibens bacteria.	Sperfeld M, Narvaez-Barragan DA, Malitsky S, Frydman V, Yuda L, Rocha J, Segev E.	Nat Microbiol	10.1038/s41564-024-01742-6	2024
	Modular Low-Copy-Number Plasmid Vectors for Rhodobacterales with Extended Host Range in Alphaproteobacteria.	Korner D, Schafer NM, Lagares A, Birmes L, Oehlmann NN, Addison H, Pohl S, Thanbichler M, Rebelein JG, Petersen J, Becker A.	ACS Synth Biol	10.1021/acssynbio.4c00062	2024
	Co-existence of two antibiotic-producing marine bacteria: Pseudoalteromonas piscicida reduce gene expression and production of the antibacterial compound, tropodithietic acid, in Phaeobacter sp.	Svendsen PB, Henriksen NNSE, Jarmusch SA, Andersen AJC, Smith K, Selsmark MW, Zhang S-D, Schostag MD, Gram L.	Appl Environ Microbiol	10.1128/aem.00588-24	2024
	The Roseobacter-Group Bacterium Phaeobacter as a Safe Probiotic Solution for Aquaculture.	Sonnenschein EC, Jimenez G, Castex M, Gram L.	Appl Environ Microbiol	10.1128/aem.02581-20	2021
	Fabrication of Microstructured Surface Topologies for the Promotion of Marine Bacteria Biofilm.	Droumpali A, Hubner J, Gram L, Taboryski R.	Micromachines (Basel)	10.3390/mi12080926	2021
	The Metano Modeling Toolbox MMTB: An Intuitive, Web-Based Toolbox Introduced by Two Use Cases.	Koblitz J, Will SE, Riemer SA, Ulas T, Neumann-Schaal M, Schomburg D.	Metabolites	10.3390/metabo11020113	2021
	Bacteria induce an amoeboid phase in coccolithophores that persists after bloom collapse.	Zweifel ST, Henshaw RJ, Muller O, Keegstra JM, Charlton SGV, Pioli R, Martinez-Perez C, Alcolombri U, Clerc E, Stocker R.	Sci Adv	10.1126/sciadv.adw7280	2025
	Antagonistic activity of Phaeobacter piscinae against the emerging fish pathogen Vibrio crassostreae in aquaculture feed algae.	Roager L, Athena-Vasileiadi D, Gram L, Sonnenschein EC.	Appl Environ Microbiol	10.1128/aem.01439-23	2024
Phylogeny	Changes in the Microbiome of Mariculture Feed Organisms after Treatment with a Potentially Probiotic Strain of Phaeobacter inhibens.	Dittmann KK, Rasmussen BB, Melchiorsen J, Sonnenschein EC, Gram L, Bentzon-Tilia M.	Appl Environ Microbiol	10.1128/aem.00499-20	2020
	Roseobacter Group Probiotics Exhibit Differential Killing of Fish Pathogenic Tenacibaculum Species.	Tesdorpf JE, Geers AU, Strube ML, Gram L, Bentzon-Tilia M.	Appl Environ Microbiol	10.1128/aem.02418-21	2022
	The ability of Phaeobacter inhibens to produce tropodithietic acid influences the community dynamics of a microalgal microbiome.	Henriksen NNSE, Schostag MD, Balder SR, Bech PK, Strube ML, Sonnenschein EC, Gram L.	ISME Commun	10.1038/s43705-022-00193-6	2022
	Aerobic bacteria produce nitric oxide via denitrification and promote algal population collapse.	Abada A, Beiralas R, Narvaez D, Sperfeld M, Duchin-Rapp Y, Lipsman V, Yuda L, Cohen B, Carmieli R, Ben-Dor S, Rocha J, Huang Zhang I, Babbin AR, Segev E.	ISME J	10.1038/s41396-023-01427-8	2023
	Genomic Evolution of the Marine Bacterium Phaeobacter inhibens during Biofilm Growth.	Majzoub ME, McElroy K, Maczka M, Schulz S, Thomas T, Egan S.	Appl Environ Microbiol	10.1128/aem.00769-21	2021
Genetics	Discovering the Molecular Determinants of Phaeobacter inhibens Susceptibility to Phaeobacter Phage MD18.	Urtecho G, Campbell DE, Hershey DM, Hussain FA, Whitaker RJ, O'Toole GA.	mSphere	10.1128/msphere.00898-20	2020
	Breakdown of 3-(allylsulfonio)propanoates in bacteria from the Roseobacter group yields garlic oil constituents.	Chhalodia AK, Dickschat JS.	Beilstein J Org Chem	10.3762/bjoc.17.51	2021
	Promising Probiotic Candidates for Sustainable Aquaculture: An Updated Review.	Hoseinifar SH, Faheem M, Liaqat I, Van Doan H, Ghosh K, Ringo E.	Animals (Basel)	10.3390/ani14243644	2024
	Vitamin B₁₂ is not shared by all marine prototrophic bacteria with their environment.	Sultana S, Bruns S, Wilkes H, Simon M, Wienhausen G.	ISME J	10.1038/s41396-023-01391-3	2023
	Autecology of an oscillating population of a novel host-associated Phaeobacter species proliferating in marine bryozoans.	Bentzon-Tilia M, Henriksen NNSE, Schostag MD, Andersen AJC, Melchiorsen J, Strube ML, Gram L.	ISME Commun	10.1093/ismeco/ycaf178	2025
	Bacteria contribute exopolysaccharides to an algal-bacterial joint extracellular matrix.	Lipsman V, Shlakhter O, Rocha J, Segev E.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00510-y	2024
Genetics	Beyond the ABCs-Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW).	Freese HM, Ringel V, Overmann J, Petersen J.	Microorganisms	10.3390/microorganisms10040738	2022
	A new dimethylsulfoniopropionate lyase of the cupin superfamily in marine bacteria.	Wang SY, Zhang N, Teng ZJ, Wang XD, Todd JD, Zhang YZ, Cao HY, Li CY.	Environ Microbiol	10.1111/1462-2920.16355	2023
Metabolism	Effect of TDA-producing Phaeobacter inhibens on the fish pathogen Vibrio anguillarum in non-axenic algae and copepod systems.	Rasmussen BB, Erner KE, Bentzon-Tilia M, Gram L.	Microb Biotechnol	10.1111/1751-7915.13275	2018
	The Antibiotic Andrimid Produced by Vibrio coralliilyticus Increases Expression of Biosynthetic Gene Clusters and Antibiotic Production in Photobacterium galatheae.	Buijs Y, Isbrandt T, Zhang SD, Larsen TO, Gram L.	Front Microbiol	10.3389/fmicb.2020.622055	2020
Genetics	Causes and Consequences of a Variant Strain of Phaeobacter inhibens With Reduced Competition.	Majzoub ME, McElroy K, Maczka M, Thomas T, Egan S.	Front Microbiol	10.3389/fmicb.2018.02601	2018
	Filling gaps in bacterial catabolic pathways with computation and high-throughput genetics.	Price MN, Deutschbauer AM, Arkin AP.	PLoS Genet	10.1371/journal.pgen.1010156	2022
Metabolism	Phaeobacter inhibens induces apoptosis-like programmed cell death in calcifying Emiliania huxleyi.	Bramucci AR, Case RJ.	Sci Rep	10.1038/s41598-018-36847-6	2019
Metabolism	Influence of Iron on Production of the Antibacterial Compound Tropodithietic Acid and Its Noninhibitory Analog in Phaeobacter inhibens.	D'Alvise PW, Phippen CB, Nielsen KF, Gram L.	Appl Environ Microbiol	10.1128/aem.02992-15	2016
Proteome	Simultaneous quantification of all B vitamins and selected biosynthetic precursors in seawater and bacteria by means of different mass spectrometric approaches.	Bruns S, Wienhausen G, Scholz-Bottcher B, Wilkes H.	Anal Bioanal Chem	10.1007/s00216-022-04317-8	2022
Pathogenicity	Dual function of tropodithietic acid as antibiotic and signaling molecule in global gene regulation of the probiotic bacterium Phaeobacter inhibens.	Beyersmann PG, Tomasch J, Son K, Stocker R, Goker M, Wagner-Dobler I, Simon M, Brinkhoff T.	Sci Rep	10.1038/s41598-017-00784-7	2017
Biotechnology	Novel metabolite madeirone and neomarinone extracted from Streptomyces aculeoletus as marine antibiofilm and antifouling agents.	Wissner JL, Almeida JR, Grilo IR, Oliveira JF, Brizida C, Escobedo-Hinojosa W, Pissaridou P, Vasquez MI, Cunha I, Sobral RG, Vasconcelos V, Gaudencio SP.	Front Chem	10.3389/fchem.2024.1425953	2024
	Algal p-coumaric acid induces oxidative stress and siderophore biosynthesis in the bacterial symbiont Phaeobacter inhibens.	Wang R, Gallant E, Wilson MZ, Wu Y, Li A, Gitai Z, Seyedsayamdost MR.	Cell Chem Biol	10.1016/j.chembiol.2021.08.002	2022
	Genome sequence of Epibacterium ulvae strain DSM 24752^T, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group.	Breider S, Sehar S, Berger M, Thomas T, Brinkhoff T, Egan S.	Environ Microbiome	10.1186/s40793-019-0343-5	2019
Proteome	Mix24X, a Lab-Assembled Reference to Evaluate Interpretation Procedures for Tandem Mass Spectrometry Proteotyping of Complex Samples.	Mappa C, Alpha-Bazin B, Pible O, Armengaud J.	Int J Mol Sci	10.3390/ijms24108634	2023
	Plasmid Transfer in the Ocean - A Case Study from the Roseobacter Group.	Petersen J, Wagner-Dobler I.	Front Microbiol	10.3389/fmicb.2017.01350	2017
	Gene Flow Across Genus Barriers - Conjugation of Dinoroseobacter shibae's 191-kb Killer Plasmid into Phaeobacter inhibens and AHL-mediated Expression of Type IV Secretion Systems.	Patzelt D, Michael V, Pauker O, Ebert M, Tielen P, Jahn D, Tomasch J, Petersen J, Wagner-Dobler I.	Front Microbiol	10.3389/fmicb.2016.00742	2016
	A marine plasmid hitchhiking vast phylogenetic and geographic distances.	Petersen J, Vollmers J, Ringel V, Brinkmann H, Ellebrandt-Sperling C, Sproer C, Howat AM, Murrell JC, Kaster AK.	Proc Natl Acad Sci U S A	10.1073/pnas.1905878116	2019
	Phosphate Limitation Triggers the Dissolution of Precipitated Iron by the Marine Bacterium Pseudovibrio sp. FO-BEG1.	Romano S, Bondarev V, Kolling M, Dittmar T, Schulz-Vogt HN.	Front Microbiol	10.3389/fmicb.2017.00364	2017
	The Sixth Element: a 102-kb RepABC Plasmid of Xenologous Origin Modulates Chromosomal Gene Expression in Dinoroseobacter shibae.	Koppenhofer S, Tomasch J, Ringel V, Birmes L, Brinkmann H, Sproer C, Jarek M, Wang H, Pradella S, Wagner-Dobler I, Petersen J.	mSystems	10.1128/msystems.00264-22	2022
	The Exometabolome of Two Model Strains of the Roseobacter Group: A Marketplace of Microbial Metabolites.	Wienhausen G, Noriega-Ortega BE, Niggemann J, Dittmar T, Simon M.	Front Microbiol	10.3389/fmicb.2017.01985	2017
Genetics	Clustered Core- and Pan-Genome Content on Rhodobacteraceae Chromosomes.	Kopejtka K, Lin Y, Jakubovicova M, Koblizek M, Tomasch J.	Genome Biol Evol	10.1093/gbe/evz138	2019
Metabolism	Hybrid biosynthesis of roseobacticides from algal and bacterial precursor molecules.	Seyedsayamdost MR, Wang R, Kolter R, Clardy J.	J Am Chem Soc	10.1021/ja508782y	2014
Enzymology	High performance CCD camera system for digitalisation of 2D DIGE gels.	Strijkstra A, Trautwein K, Roesler S, Feenders C, Danzer D, Riemenschneider U, Blasius B, Rabus R.	Proteomics	10.1002/pmic.201500385	2016
	Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics.	Price MN, Zane GM, Kuehl JV, Melnyk RA, Wall JD, Deutschbauer AM, Arkin AP.	PLoS Genet	10.1371/journal.pgen.1007147	2018
Metabolism	An overview of 2D DIGE analysis of marine (environmental) bacteria.	Rabus R.	Methods Mol Biol	10.1007/978-1-61779-573-2_25	2012
	Biological versus technical variability in 2-D DIGE experiments with environmental bacteria.	Zech H, Echtermeyer C, Wohlbrand L, Blasius B, Rabus R.	Proteomics	10.1002/pmic.201100071	2011
	Does the Chemodiversity of Bacterial Exometabolomes Sustain the Chemodiversity of Marine Dissolved Organic Matter?	Noriega-Ortega BE, Wienhausen G, Mentges A, Dittmar T, Simon M, Niggemann J.	Front Microbiol	10.3389/fmicb.2019.00215	2019
	Assessing the exoproteome of marine bacteria, lesson from a RTX-toxin abundantly secreted by Phaeobacter strain DSM 17395.	Durighello E, Christie-Oleza JA, Armengaud J.	PLoS One	10.1371/journal.pone.0089691	2014
	Exoproteome Analysis of the Seaweed Pathogen Nautella italica R11 Reveals Temperature-Dependent Regulation of RTX-Like Proteins.	Gardiner M, Bournazos AM, Maturana-Martinez C, Zhong L, Egan S.	Front Microbiol	10.3389/fmicb.2017.01203	2017
Pathogenicity	Vibriosis Outbreaks in Aquaculture: Addressing Environmental and Public Health Concerns and Preventive Therapies Using Gilthead Seabream Farming as a Model System.	Sanches-Fernandes GMM, Sa-Correia I, Costa R.	Front Microbiol	10.3389/fmicb.2022.904815	2022
	Genome-Wide Discovery of Putative sRNAs in Paracoccus denitrificans Expressed under Nitrous Oxide Emitting Conditions.	Gaimster H, Chalklen L, Alston M, Munnoch JT, Richardson DJ, Gates AJ, Rowley G.	Front Microbiol	10.3389/fmicb.2016.01806	2016
Pathogenicity	Identification of potential biomarkers in cholestasis and the therapeutic effect of melatonin by metabolomics, multivariate data and pathway analyses.	Yu H, Li Y, Xu Z, Wang D, Shi S, Deng H, Zeng B, Zheng Z, Sun L, Deng X, Zhong X.	Int J Mol Med	10.3892/ijmm.2018.3859	2018
Metabolism	Tropodithietic acid production in Phaeobacter gallaeciensis is regulated by N-acyl homoserine lactone-mediated quorum sensing.	Berger M, Neumann A, Schulz S, Simon M, Brinkhoff T.	J Bacteriol	10.1128/jb.05818-11	2011
Biotechnology	Bacterial Tropone Natural Products and Derivatives: Overview of their Biosynthesis, Bioactivities, Ecological Role and Biotechnological Potential.	Duan Y, Petzold M, Saleem-Batcha R, Teufel R.	Chembiochem	10.1002/cbic.201900786	2020
Metabolism	Growth phase-dependent global protein and metabolite profiles of Phaeobacter gallaeciensis strain DSM 17395, a member of the marine Roseobacter-clade.	Zech H, Thole S, Schreiber K, Kalhofer D, Voget S, Brinkhoff T, Simon M, Schomburg D, Rabus R.	Proteomics	10.1002/pmic.200900120	2009
Metabolism	Investigation of the Genetics and Biochemistry of Roseobacticide Production in the Roseobacter Clade Bacterium Phaeobacter inhibens.	Wang R, Gallant E, Seyedsayamdost MR.	mBio	10.1128/mbio.02118-15	2016
	Quorum Sensing System of Ruegeria mobilis Rm01 Controls Lipase and Biofilm Formation.	Su Y, Tang K, Liu J, Wang Y, Zheng Y, Zhang XH.	Front Microbiol	10.3389/fmicb.2018.03304	2018
	Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment.	Breider S, Teshima H, Petersen J, Chertkov O, Dalingault H, Chen A, Pati A, Ivanova N, Lapidus A, Goodwin LA, Chain P, Detter JC, Rohde M, Tindall BJ, Kyrpides NC, Woyke T, Simon M, Goker M, Klenk HP, Brinkhoff T.	Stand Genomic Sci	10.4056/sigs.3828824	2014
Metabolism	Dynamic metabolic exchange governs a marine algal-bacterial interaction.	Segev E, Wyche TP, Kim KH, Petersen J, Ellebrandt C, Vlamakis H, Barteneva N, Paulson JN, Chai L, Clardy J, Kolter R.	Elife	10.7554/elife.17473	2016
	Rapid quantification of mutant fitness in diverse bacteria by sequencing randomly bar-coded transposons.	Wetmore KM, Price MN, Waters RJ, Lamson JS, He J, Hoover CA, Blow MJ, Bristow J, Butland G, Arkin AP, Deutschbauer A.	mBio	10.1128/mbio.00306-15	2015
Metabolism	Isotopically labeled sulfur compounds and synthetic selenium and tellurium analogues to study sulfur metabolism in marine bacteria.	Brock NL, Citron CA, Zell C, Berger M, Wagner-Dobler I, Petersen J, Brinkhoff T, Simon M, Dickschat JS.	Beilstein J Org Chem	10.3762/bjoc.9.108	2013
Pathogenicity	Anti-Larval and Anti-Algal Natural Products from Marine Microorganisms as Sources of Anti-Biofilm Agents.	Wang KL, Dou ZR, Gong GF, Li HF, Jiang B, Xu Y.	Mar Drugs	10.3390/md20020090	2022
Metabolism	Large-Scale 13C flux profiling reveals conservation of the Entner-Doudoroff pathway as a glycolytic strategy among marine bacteria that use glucose.	Klingner A, Bartsch A, Dogs M, Wagner-Dobler I, Jahn D, Simon M, Brinkhoff T, Becker J, Wittmann C.	Appl Environ Microbiol	10.1128/aem.03157-14	2015
	Resistance and tolerance to tropodithietic acid, an antimicrobial in aquaculture, is hard to select.	Porsby CH, Webber MA, Nielsen KF, Piddock LJ, Gram L.	Antimicrob Agents Chemother	10.1128/aac.01222-10	2011
	Horizontal operon transfer, plasmids, and the evolution of photosynthesis in Rhodobacteraceae.	Brinkmann H, Goker M, Koblizek M, Wagner-Dobler I, Petersen J.	ISME J	10.1038/s41396-018-0150-9	2018
	TCA cycle enhancement and uptake of monomeric substrates support growth of marine Roseobacter at low temperature.	Wang M, Wang H, Wang P, Fu HH, Li CY, Qin QL, Liang Y, Wang M, Chen XL, Zhang YZ, Zhang W.	Commun Biol	10.1038/s42003-022-03631-2	2022
Metabolism	Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.	Berger M, Brock NL, Liesegang H, Dogs M, Preuth I, Simon M, Dickschat JS, Brinkhoff T.	Appl Environ Microbiol	10.1128/aem.07657-11	2012
	Antifouling Napyradiomycins from Marine-Derived Actinomycetes Streptomyces aculeolatus.	Pereira F, Almeida JR, Paulino M, Grilo IR, Macedo H, Cunha I, Sobral RG, Vasconcelos V, Gaudencio SP.	Mar Drugs	10.3390/md18010063	2020
	Characterization and Transcriptome Studies of Autoinducer Synthase Gene from Multidrug Resistant Acinetobacter baumannii Strain 863.	Ng CK, How KY, Tee KK, Chan KG.	Genes (Basel)	10.3390/genes10040282	2019
	Disruption of cell-to-cell signaling does not abolish the antagonism of Phaeobacter gallaeciensis toward the fish pathogen Vibrio anguillarum in algal systems.	Prol Garcia MJ, D'Alvise PW, Gram L.	Appl Environ Microbiol	10.1128/aem.01436-13	2013
Metabolism	Conserved small mRNA with an unique, extended Shine-Dalgarno sequence.	Hahn J, Thalmann S, Migur A, von Boeselager RF, Kubatova N, Kubareva E, Schwalbe H, Evguenieva-Hackenberg E.	RNA Biol	10.1080/15476286.2016.1256534	2017
Proteome	"You produce while I clean up", a strategy revealed by exoproteomics during Synechococcus-Roseobacter interactions.	Christie-Oleza JA, Scanlan DJ, Armengaud J.	Proteomics	10.1002/pmic.201400562	2015
	Complementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea.	Wohlbrand L, Wemheuer B, Feenders C, Ruppersberg HS, Hinrichs C, Blasius B, Daniel R, Rabus R.	Front Microbiol	10.3389/fmicb.2017.00442	2017
Metabolism	Gene regulatory and metabolic adaptation processes of Dinoroseobacter shibae DFL12T during oxygen depletion.	Laass S, Kleist S, Bill N, Druppel K, Kossmehl S, Wohlbrand L, Rabus R, Klein J, Rohde M, Bartsch A, Wittmann C, Schmidt-Hohagen K, Tielen P, Jahn D, Schomburg D.	J Biol Chem	10.1074/jbc.m113.545004	2014
Phylogeny	The planctomycete Stieleria maiorica Mal15^T employs stieleriacines to alter the species composition in marine biofilms.	Kallscheuer N, Jeske O, Sandargo B, Boedeker C, Wiegand S, Bartling P, Jogler M, Rohde M, Petersen J, Medema MH, Surup F, Jogler C.	Commun Biol	10.1038/s42003-020-0993-2	2020
Genetics	Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.	Breider S, Scheuner C, Schumann P, Fiebig A, Petersen J, Pradella S, Klenk HP, Brinkhoff T, Goker M.	Front Microbiol	10.3389/fmicb.2014.00416	2014
	Biogeographic traits of dimethyl sulfide and dimethylsulfoniopropionate cycling in polar oceans.	Teng ZJ, Qin QL, Zhang W, Li J, Fu HH, Wang P, Lan M, Luo G, He J, McMinn A, Wang M, Chen XL, Zhang YZ, Chen Y, Li CY.	Microbiome	10.1186/s40168-021-01153-3	2021
	Oxidative stress and starvation in Dinoroseobacter shibae: the role of extrachromosomal elements.	Soora M, Tomasch J, Wang H, Michael V, Petersen J, Engelen B, Wagner-Dobler I, Cypionka H.	Front Microbiol	10.3389/fmicb.2015.00233	2015
Genetics	Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5.	Zhang Y, Sun Y, Jiao N, Stepanauskas R, Luo H.	Appl Environ Microbiol	10.1128/aem.03678-15	2016
Genetics	Picodroplet partitioned whole genome amplification of low biomass samples preserves genomic diversity for metagenomic analysis.	Hammond M, Homa F, Andersson-Svahn H, Ettema TJ, Joensson HN.	Microbiome	10.1186/s40168-016-0197-7	2016
Genetics	Key Impact of an Uncommon Plasmid on Bacillus amyloliquefaciens subsp. plantarum S499 Developmental Traits and Lipopeptide Production.	Molinatto G, Franzil L, Steels S, Puopolo G, Pertot I, Ongena M.	Front Microbiol	10.3389/fmicb.2017.00017	2017
Metabolism	The mannitol utilization system of the marine bacterium Zobellia galactanivorans.	Groisillier A, Labourel A, Michel G, Tonon T.	Appl Environ Microbiol	10.1128/aem.02808-14	2015
Metabolism	Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade.	Furch T, Preusse M, Tomasch J, Zech H, Wagner-Dobler I, Rabus R, Wittmann C.	BMC Microbiol	10.1186/1471-2180-9-209	2009
	Characterisation of non-autoinducing tropodithietic Acid (TDA) production from marine sponge Pseudovibrio species.	Harrington C, Reen FJ, Mooij MJ, Stewart FA, Chabot JB, Guerra AF, Glockner FO, Nielsen KF, Gram L, Dobson AD, Adams C, O'Gara F.	Mar Drugs	10.3390/md12125960	2014
Metabolism	Discovery Strategies of Bioactive Compounds Synthesized by Nonribosomal Peptide Synthetases and Type-I Polyketide Synthases Derived from Marine Microbiomes.	Amoutzias GD, Chaliotis A, Mossialos D.	Mar Drugs	10.3390/md14040080	2016
	Nanomolar responsiveness of marine Phaeobacter inhibens DSM 17395 toward carbohydrates and amino acids.	Weiten A, Kalvelage K, Neumann-Schaal M, Buschen R, Scheve S, Winklhofer M, Rabus R	Microb Physiol	10.1159/000524702	2022
	Luciferase-Based Determination of ATP/NAD(H) Pools in a Marine (Environmental) Bacterium.	Wunsch D, Scheve S, Weiten A, Kalvelage K, Rabus R	Microb Physiol	10.1159/000522414	2022
	A novel class of sulfur-containing aminolipids widespread in marine roseobacters.	Smith AF, Silvano E, Pauker O, Guillonneau R, Quareshy M, Murphy A, Mausz MA, Stirrup R, Rihtman B, Aguilo-Ferretjans M, Brandsma J, Petersen J, Scanlan DJ, Chen Y	ISME J	10.1038/s41396-021-00933-x	2021
Metabolism	Global Response of Phaeobacter inhibens DSM 17395 to Deletion of Its 262-kb Chromid Encoding Antibiotic Synthesis.	Wunsch D, Strijkstra A, Wohlbrand L, Freese HM, Scheve S, Hinrichs C, Trautwein K, Maczka M, Petersen J, Schulz S, Overmann J, Rabus R	Microb Physiol	10.1159/000508591	2020
Metabolism	Amino Acid and Sugar Catabolism in the Marine Bacterium Phaeobacter inhibens DSM 17395 from an Energetic Viewpoint.	Wunsch D, Trautwein K, Scheve S, Hinrichs C, Feenders C, Blasius B, Schomburg D, Rabus R	Appl Environ Microbiol	10.1128/AEM.02095-19	2019
Metabolism	The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks.	Trautwein K, Hensler M, Wiegmann K, Skorubskaya E, Wohlbrand L, Wunsch D, Hinrichs C, Feenders C, Muller C, Schell K, Ruppersberg H, Vagts J, Kossmehl S, Steinbuchel A, Schmidt-Kopplin P, Wilkes H, Hillebrand H, Blasius B, Schomburg D, Rabus R	FEMS Microbiol Ecol	10.1093/femsec/fiy154	2018
Cultivation	A Novel Microbial Culture Chamber Co-cultivation System to Study Algal-Bacteria Interactions Using Emiliania huxleyi and Phaeobacter inhibens as Model Organisms.	Thogersen MS, Melchiorsen J, Ingham C, Gram L	Front Microbiol	10.3389/fmicb.2018.01705	2018
	Acyl-group specificity of AHL synthases involved in quorum-sensing in Roseobacter group bacteria.	Ziesche L, Rinkel J, Dickschat JS, Schulz S	Beilstein J Org Chem	10.3762/bjoc.14.112	2018
Phylogeny	Phylogenetic distribution of roseobacticides in the Roseobacter group and their effect on microalgae.	Sonnenschein EC, Phippen CBW, Bentzon-Tilia M, Rasmussen SA, Nielsen KF, Gram L	Environ Microbiol Rep	10.1111/1758-2229.12649	2018
Metabolism	The fate of lysine: Non-targeted stable isotope analysis reveals parallel ways for lysine catabolization in Phaeobacter inhibens.	Reimer LC, Will SE, Schomburg D	PLoS One	10.1371/journal.pone.0186395	2017
	The Composite 259-kb Plasmid of Martelella mediterranea DSM 17316(T)-A Natural Replicon with Functional RepABC Modules from Rhodobacteraceae and Rhizobiaceae.	Bartling P, Brinkmann H, Bunk B, Overmann J, Goker M, Petersen J	Front Microbiol	10.3389/fmicb.2017.01787	2017
Metabolism	Non-Redfield, nutrient synergy and flexible internal elemental stoichiometry in a marine bacterium.	Trautwein K, Feenders C, Hulsch R, Ruppersberg HS, Strijkstra A, Kant M, Vagts J, Wunsch D, Michalke B, Maczka M, Schulz S, Hillebrand H, Blasius B, Rabus R	FEMS Microbiol Ecol	10.1093/femsec/fix059	2017
Metabolism	Chemical differentiation of three DMSP lyases from the marine Roseobacter group.	Burkhardt I, Lauterbach L, Brock NL, Dickschat JS	Org Biomol Chem	10.1039/c7ob00913e	2017
Metabolism	The limits to growth - energetic burden of the endogenous antibiotic tropodithietic acid in Phaeobacter inhibens DSM 17395.	Will SE, Neumann-Schaal M, Heydorn RL, Bartling P, Petersen J, Schomburg D	PLoS One	10.1371/journal.pone.0177295	2017
Cultivation	Photometric Determination of Ammonium and Phosphate in Seawater Medium Using a Microplate Reader.	Ruppersberg HS, Goebel MR, Kleinert SI, Wunsch D, Trautwein K, Rabus R	J Mol Microbiol Biotechnol	10.1159/000454814	2017
Genetics	Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill.	Giebel HA, Klotz F, Voget S, Poehlein A, Grosser K, Teske A, Brinkhoff T	Stand Genomic Sci	10.1186/s40793-016-0201-7	2016
Metabolism	Native plasmids restrict growth of Phaeobacter inhibens DSM 17395: Energetic costs of plasmids assessed by quantitative physiological analyses.	Trautwein K, Will SE, Hulsch R, Maschmann U, Wiegmann K, Hensler M, Michael V, Ruppersberg H, Wunsch D, Feenders C, Neumann-Schaal M, Kaltenhauser S, Ulbrich M, Schmidt-Hohagen K, Blasius B, Petersen J, Schomburg D, Rabus R	Environ Microbiol	10.1111/1462-2920.13381	2016
	Phaeobacter inhibens as biocontrol agent against Vibrio vulnificus in oyster models.	Porsby CH, Gram L	Food Microbiol	10.1016/j.fm.2016.01.005	2016
Phylogeny	Biofilm plasmids with a rhamnose operon are widely distributed determinants of the 'swim-or-stick' lifestyle in roseobacters.	Michael V, Frank O, Bartling P, Scheuner C, Goker M, Brinkmann H, Petersen J	ISME J	10.1038/ismej.2016.30	2016
	Plasmid curing and the loss of grip--the 65-kb replicon of Phaeobacter inhibens DSM 17395 is required for biofilm formation, motility and the colonization of marine algae.	Frank O, Michael V, Pauker O, Boedeker C, Jogler C, Rohde M, Petersen J	Syst Appl Microbiol	10.1016/j.syapm.2014.12.001	2014
Metabolism	Biofilm formation is not a prerequisite for production of the antibacterial compound tropodithietic acid in Phaeobacter inhibens DSM17395.	Prol Garcia MJ, D'Alvise PW, Rygaard AM, Gram L	J Appl Microbiol	10.1111/jam.12659	2014
Metabolism	Fifteen years of physiological proteo(geno)mics with (marine) environmental bacteria.	Rabus R	Arch Physiol Biochem	10.3109/13813455.2014.951658	2014
Genetics	Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)).	Frank O, Pradella S, Rohde M, Scheuner C, Klenk HP, Goker M, Petersen J	Stand Genomic Sci	10.4056/sigs.5179110	2014
	Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid.	Rabe P, Klapschinski TA, Brock NL, Citron CA, D'Alvise P, Gram L, Dickschat JS	Beilstein J Org Chem	10.3762/bjoc.10.188	2014
Genetics	Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.	Dogs M, Voget S, Teshima H, Petersen J, Davenport K, Dalingault H, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Standfest S, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Klenk HP, Goker M, Brinkhoff T	Stand Genomic Sci	10.4056/sigs.4448212	2013
Metabolism	Carbohydrate catabolism in Phaeobacter inhibens DSM 17395, a member of the marine roseobacter clade.	Wiegmann K, Hensler M, Wohlbrand L, Ulbrich M, Schomburg D, Rabus R	Appl Environ Microbiol	10.1128/AEM.00719-14	2014
Metabolism	Acyl-homoserine lactone quorum sensing in the Roseobacter clade.	Zan J, Liu Y, Fuqua C, Hill RT	Int J Mol Sci	10.3390/ijms15010654	2014
Phylogeny	Molecular and phenotypic analyses reveal the non-identity of the Phaeobacter gallaeciensis type strain deposits CIP 105210T and DSM 17395.	Buddruhs N, Pradella S, Goker M, Pauker O, Pukall R, Sproer C, Schumann P, Petersen J, Brinkhoff T	Int J Syst Evol Microbiol	10.1099/ijs.0.053900-0	2013
Metabolism	Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade).	Druppel K, Hensler M, Trautwein K, Kossmehl S, Wohlbrand L, Schmidt-Hohagen K, Ulbrich M, Bergen N, Meier-Kolthoff JP, Goker M, Klenk HP, Schomburg D, Rabus R	Environ Microbiol	10.1111/1462-2920.12276	2013
Metabolism	Toxicity of bioactive and probiotic marine bacteria and their secondary metabolites in Artemia sp. and Caenorhabditis elegans as eukaryotic model organisms.	Neu AK, Mansson M, Gram L, Prol-Garcia MJ	Appl Environ Microbiol	10.1128/AEM.02717-13	2013
Metabolism	Subcellular protein localization (cell envelope) in Phaeobacter inhibens DSM 17395.	Kossmehl S, Wohlbrand L, Druppel K, Feenders C, Blasius B, Rabus R	Proteomics	10.1002/pmic.201300112	2013
Metabolism	Dynamics of amino acid utilization in Phaeobacter inhibens DSM 17395.	Zech H, Hensler M, Kossmehl S, Druppel K, Wohlbrand L, Trautwein K, Colby T, Schmidt J, Reinhardt R, Schmidt-Hohagen K, Schomburg D, Rabus R	Proteomics	10.1002/pmic.201200560	2013
Metabolism	Adaptation of Phaeobacter inhibens DSM 17395 to growth with complex nutrients.	Zech H, Hensler M, Kossmehl S, Druppel K, Wohlbrand L, Trautwein K, Hulsch R, Maschmann U, Colby T, Schmidt J, Reinhardt R, Schmidt-Hohagen K, Schomburg D, Rabus R	Proteomics	10.1002/pmic.201200513	2013
Biotechnology	Impact of Quorum Sensing and Tropodithietic Acid Production on the Exometabolome of Phaeobacter inhibens.	Srinivas S, Berger M, Brinkhoff T, Niggemann J	Front Microbiol	10.3389/fmicb.2022.917969	2022
Phylogeny	Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1999 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera.	Martens T, Heidorn T, Pukall R, Simon M, Tindall BJ, Brinkhoff T	Int J Syst Evol Microbiol	10.1099/ijs.0.63724-0	2006

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#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Phaeobacter inhibens (DSM 17395)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000154765

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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