Salimicrobium salexigens (DSM 22782, CECT 7568, JCM 16414)

Name: Salimicrobium salexigens (DSM 22782, CECT 7568, JCM 16414)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1552

Type strain

Strain Designation 29CMI

Culture col. no. DSM 22782 CECT 7568 JCM 16414 LMG 25386 29CMI

NCBI tax ID(s) 908941

Special Collections DSMZ JCM

History <- C. Sánchez-Porro, Univ. Seville, Dept. Microbiol. Parasitol., Spain; 29CMI <- P. Yilmaz C. Sánchez-Porro 29CMI.

Links

Salimicrobium salexigens 29CMI is a bacterium that was isolated from salted cowskin obtained from Australia.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 363727

LMG 25386,CECT 7568,JCM 16414,DSM 22782

@ref 20215

Last LPSN update 2026-02-09 11:18:08

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Salimicrobium

Species Salimicrobium salexigens

Full scientific name Salimicrobium salexigens de la Haba et al. 2011

BacDive ID	Other strains from **Salimicrobium salexigens** (1)	Type strain
161771	S. salexigens JCM 16415

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16515	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 50.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
16515	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		92.7

Observation

67770

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body-Site	#Organ	#Skin, Nail, Hair
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code
16515	salted cowskin obtained from Australia	Istanbul	Turkey	TUR
67770	Salted hides from Australia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16515	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2681813520 annotated assembly for Salimicrobium salexigens DSM 22782	scaffold	GCA_900156705	908941.3	2681813520	908941	68.64

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16515	Salimicrobium salexigens 16S rRNA gene, type strain 29CMIT	FR714935	1481		908941

GC content

@ref	GC-content (mol%)	Method
16515	50.7	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Salimicrobium salexigens DSM 22782
NCBI: GCA_900156705

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	92.70	no
125439	motility	BacteriaNetⓘ	yes	86.50	no
125439	gram_stain	BacteriaNetⓘ	variable	86.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	85.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Salimicrobium salexigens strain DSM 22782
PATRIC: 908941.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	79.71	no
125438	anaerobic	anaerobicⓘ	no	95.97	no
125438	aerobic	aerobicⓘ	yes	80.31	no
125438	spore-forming	spore-formingⓘ	no	51.21	no
125438	thermophilic	thermophileⓘ	no	86.08	no
125438	flagellated	motile2+ⓘ	yes	65.18	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Diversity and Biotechnological Potential of Cultivable Halophilic and Halotolerant Bacteria from the "Los Negritos" Geothermal Area.	Guevara-Luna J, Arroyo-Herrera I, Tapia-Garcia EY, Estrada-de Los Santos P, Ortega-Nava AJ, Vasquez-Murrieta MS.	Microorganisms	10.3390/microorganisms12030482	2024
Phylogeny	Salimicrobium humidisoli sp. nov., Isolated from Saline-Alkaline Soil.	Xiong Q, Liu Y, Zhao J, Fang Z, Zhang G	Curr Microbiol	10.1007/s00284-021-02551-4	2021
Phylogeny	Salimicrobium jeotgali sp. nov., isolated from salted, fermented seafood.	Choi EJ, Jin HM, Kim KH, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.062042-0	2014
Phylogeny	Salimicrobium salexigens sp. nov., a moderately halophilic bacterium from salted hides.	de la Haba RR, Yilmaz P, Sanchez-Porro C, Birbir M, Ventosa A	Syst Appl Microbiol	10.1016/j.syapm.2011.04.002	2011

References

#16515	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22782
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Salimicrobium salexigens (DSM 22782, CECT 7568, JCM 16414)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900156705

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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