Salimicrobium flavidum ISL-25 | Type strain | DSM 23127, CCUG 56755, KCTC 13260

Strain identifier

BacDive ID: 1551

Type strain:

Species: Salimicrobium flavidum

Strain Designation: ISL-25

Culture col. no.: DSM 23127, CCUG 56755, KCTC 13260

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #16720]	Domain	Bacteria
[Ref.: #16720]	Phylum	Firmicutes
[Ref.: #16720]	Class	Bacilli
[Ref.: #16720]	Order	Bacillales
[Ref.: #16720]	Family	Bacillaceae
[Ref.: #16720]	Genus	Salimicrobium
[Ref.: #16720]	Species	Salimicrobium flavidum
[Ref.: #16720]	Full Scientific Name	Salimicrobium flavidum Yoon et al. 2009
[Ref.: #16720]	Strain Designation	ISL-25
[Ref.: #16720]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	25-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Bacilli		Int. J. Syst. Evol. Microbiol. 60:469
[Ref.: #20215]	Family	Bacillaceae		Int. J. Syst. Bacteriol. 30:235
[Ref.: #20215]	Genus	Salimicrobium	gen. nov. (VP)	Int. J. Syst. Evol. Microbiol. 57:2406*
[Ref.: #20215]	Species	Salimicrobium flavidum	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 59:2839*
[Ref.: #20215]	Full Scientific Name	Salimicrobium flavidum Yoon et al. 2009

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #29285]	Gram stain	variable
[Ref.: #29285]	Cell length	0.85 µm
[Ref.: #29285]	Cell width	4.9 µm
[Ref.: #29285]	Motility	yes

[Ref.: #61077]

Incubation period

5 days

	Enzyme	Enzyme activity	EC number
[Ref.: #29285]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29285]	catalase	+	1.11.1.6
[Ref.: #29285]	cytochrome oxidase	+	1.9.3.1

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29285]		NaCl		growth	01-26	%
[Ref.: #29285]		NaCl		optimum	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29285]	Fructose	+	carbon source
[Ref.: #29285]	Glucose	+	carbon source
[Ref.: #29285]	Mannitol	+	carbon source
[Ref.: #29285]	Mannose	+	carbon source
[Ref.: #29285]	Melibiose	+	carbon source
[Ref.: #29285]	Ribose	+	carbon source
[Ref.: #29285]	Sucrose	+	carbon source
[Ref.: #29285]	Trehalose	+	carbon source
[Ref.: #29285]	Tween 20	+	carbon source
[Ref.: #29285]	Tween 40	+	carbon source
[Ref.: #29285]	Tween 60	+	carbon source
[Ref.: #29285]	Tween 80	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

[Ref.: #61077]

Oxygen tolerance

aerobe

[Ref.: #29285]

Ability of spore formation

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #16720]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514), 35°C, + 8% NaCl

[Ref.: #16720]

Culture medium growth

[Ref.: #16720]

Culture medium link

medium recipe provided by DSMZ

		Temperature
[Ref.: #16720]	growth	35 ̊C
[Ref.: #29285]	growth	04-40 ̊C
[Ref.: #29285]	optimum	33.5 ̊C
[Ref.: #61077]	growth	37 ̊C

[Ref.: #16720]	Temperature range	mesophilic
[Ref.: #29285]	Temperature range	mesophilic
[Ref.: #61077]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29285]			optimum	7.5
[Ref.: #29285]			growth	06-08

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #16720]

Sample type/isolated from

marine solar saltern sediment

[Ref.: #16720]

Geographic location (country and/or sea, region)

Yellow Sea

[Ref.: #16720]

Country

Republic of Korea

[Ref.: #16720]

Continent

Asia

[Ref.: #61077]

Sample type/isolated from

Marine solar saltern sediment

[Ref.: #61077]

Sampling date

2006

[Ref.: #61077]

Geographic location (country and/or sea, region)

Yellow Sea

[Ref.: #61077]

Country

Republic of Korea

[Ref.: #61077]

Continent

Asia

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Condition	#Saline	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #16720]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #16720]	GC-content	49.3 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29285]	GC-content	49.3 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #16720]	INSDC (WGS)		FTOC00000000
[Ref.: #16720]	GenBank Direct submission		FJ357160

Availability in culture collectionsStrain availability

[Ref.: #16720]

Culture collection no.

DSM 23127, CCUG 56755, KCTC 13260

[Ref.: #16720]

Strain history

<- KCTC <- J. H. Yoon, KRIBB; ISL-25

[Ref.: #20218]

Associated Passport(s) in StrainInfo

845863, 845864

References

#16720

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23127

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#29285

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 ) - originally annotated from #25701 (see below)

#61077 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56755

#25701

IJSEM 2839 2009 ( DOI 10.1099/ijs.0.010215-0 )

* These References are textmined

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