Streptomyces purpurogeneiscleroticus (DSM 43156, ATCC 19348, CBS 409.66)

Name: Streptomyces purpurogeneiscleroticus (DSM 43156, ATCC 19348, CBS 409.66)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15507

Type strain

Strain Designation 186

Culture col. no. DSM 43156 ATCC 19348 CBS 409.66 CBS 659.72 DSM 40271 27 more

NCBI tax ID(s) 68259

Special Collections DSMZ JCM JMRC

History DSMZ <- KCC <- V.D. Kuznetsov, RIA <- Hindustan Antibiotics Ltd., HACC 186 JCM <-- KCC A-0080 <-- IPV 1528 <-- HACC 186 (M. J. Thirumalachar C-3).

Links

Streptomyces purpurogeneiscleroticus 186 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 319091

PCM 2306,ATCC 19348,IFO 13001,IFO 13358,NRRL B-2952,DSM 43156,DSM 40271,IFO 13903,JCM 3080,JCM 3103,JCM 4818,NCIB 10981,CCRC 13317,NCIMB 10981,CBS 409.66,CBS 659.72,NBRC 13001,NBRC 13358,NBRC 13903,BCRC 13317,HAMBI 1061,BCRC 15113,CCRC 15113,CGMCC 4.1929

@ref 20215

Last LPSN update 2026-05-29 08:28:33

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces purpurogeneiscleroticus

Full scientific name Streptomyces purpurogeneiscleroticus corrig. Pridham 1970 (Approved Lists 1980)

Synonyms (2)

Streptomyces purpurogeniscleroticus
Chainia purpurogena

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	98.913
125439		92.246

Multimedia

@ref:	10824
multimedia content:	DSM_43156.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_43156.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10824	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10824	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10824	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.143
125439	obligate aerobe	97.415

Spore formation

@ref	Spore formation	Confidence
125438		93.09

Observation

67770

Observationquinones: MK-9(H₈)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
10824	soil
67770	Soil	Pimpri	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB184544 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	28
Soil Samples	379
Animal Samples	28
Plant Samples	3
Total Samples	438

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10824	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID
66792	ASM2002400v1 assembly for Streptomyces purpurogeneiscleroticus DSM 43156	scaffold	GCA_020024005	68259.10	8111419060	68259
67770	ASM128015v1 assembly for Streptomyces purpurogeneiscleroticus NRRL B-2952	contig	GCA_001280155		2767802104	68259
66792	Streptomyces purpurogeneiscleroticus strain DSM 43156	contig		68259.6		68259

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces purpurogeneiscleroticus strain CGMCC 4.1929 16S ribosomal RNA gene, partial sequence	HQ244458	1381	68259
20218	Streptomyces purpurogeneiscleroticus 16S rRNA gene, type strain DSM 43156T	AJ621604	1498	68259
20218	Streptomyces purpurogeneiscleroticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4818	D44385	121	68259
20218	Streptomyces purpurogeneiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 13001	AB184250	1474	68259
20218	Streptomyces purpurogeneiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 13903	AB184544	1480	68259

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2002400v1 assembly for Streptomyces purpurogeneiscleroticus DSM 43156
NCBI: GCA_020024005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.42	no
125439	gram_stain	BacteriaNetⓘ	positive	98.91	no
125439	motility	BacteriaNetⓘ	no	92.25	no
125439	spore_formation	BacteriaNetⓘ	yes	84.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces purpurogeneiscleroticus DSM 43156
NCBI: GCA_020024005.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.17	no
125438	anaerobic	anaerobicⓘ	no	96.55	no
125438	aerobic	aerobicⓘ	yes	90.14	no
125438	spore-forming	spore-formingⓘ	yes	93.09	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	79.14	no

Literature

Title	Authors	Journal	DOI	Year
New evidence supports the prophage origin of RcGTA.	Xu Y, Liu B, Jiao N, Liu J, Chen F.	Appl Environ Microbiol	10.1128/aem.00434-24	2024
Comparative genomic and functional analysis of Arthrobacter sp. UMCV2 reveals the presence of luxR-related genes inducible by the biocompound N, N-dimethylhexadecilamine.	Chavez-Moctezuma MP, Martinez-Camara R, Hernandez-Salmeron J, Moreno-Hagelsieb G, Santoyo G, Valencia-Cantero E.	Front Microbiol	10.3389/fmicb.2022.1040932	2022
In silico analyses of conservational, functional and phylogenetic distribution of the LuxI and LuxR homologs in Gram-positive bacteria.	Rajput A, Kumar M.	Sci Rep	10.1038/s41598-017-07241-5	2017
Insights into origin and evolution of alpha-proteobacterial gene transfer agents.	Shakya M, Soucy SM, Zhaxybayeva O.	Virus Evol	10.1093/ve/vex036	2017
Aerobic Methoxydotrophy: Growth on Methoxylated Aromatic Compounds by Methylobacteriaceae.	Lee JA, Stolyar S, Marx CJ.	Front Microbiol	10.3389/fmicb.2022.849573	2022

References

#10824	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43156
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces purpurogeneiscleroticus (DSM 43156, ATCC 19348, CBS 409.66)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_020024005

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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