Name: Streptomyces purpurogeneiscleroticus 186
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15507

Type strain:

Species: Streptomyces purpurogeneiscleroticus

Strain Designation: 186

Culture col. no.: DSM 43156, ATCC 19348, CBS 409.66, CBS 659.72, DSM 40271, IFO 13001, IFO 13358, IFO 13903, ISP 5271, JCM 3080, JCM 3103, JCM 4818, KCC A-0103, KCC S-0818, NBRC 13001, NBRC 13358, NBRC 13903, NCIB 10981, NRRL B-2952, RIA 1319, RIA 886, BCRC 13317, BCRC 15113, CGMCC 4.1929, CMI 112722, HAMBI 1061, NCIMB 10981, PCM 2306

Strain history: KCC A-0080 <-- IPV 1528 <-- HACC 186 (M. J. Thirumalachar C-3).

NCBI tax ID(s): 68259 (species)

SI-ID 319091

ATCC 19348, IFO 13001, IFO 13358, NRRL B-2952, DSM 43156, DSM 40271, IFO 13903, JCM 3080, JCM 3103, JCM 4818, NCIB 10981, CCRC 13317, NCIMB 10981, CBS 409.66, CBS 659.72, NBRC 13001, NBRC 13358, NBRC 13903, BCRC 13317, HAMBI 1061, BCRC 15113, CCRC 15113, CGMCC 4.1929

Section

Streptomyces purpurogeneiscleroticus 186 is a spore-forming, mesophilic bacterium that was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces purpurogeneiscleroticus**
	Full Scientific Name (LPSN)	Streptomyces purpurogeneiscleroticus corrig. Pridham 1970 (Approved Lists 1980)

	Synonym	Chainia purpurogena
	Synonym	Streptomyces purpurogeniscleroticus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %92.206

Multimedia content

[Ref.: #10824]

Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10824]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #10824]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10824]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #10824]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-9(H₈)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10824]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Pimpri
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB184544 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	28
Soil Samples	379
Animal Samples	28
Plant Samples	3
Total Samples	438

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10824]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces purpurogeneiscleroticus strain CGMCC 4.1929 16S ribosomal RNA gene, partial sequence	HQ244458	1381	ENA	68259 tax ID	*
[Ref.: #20218]	Streptomyces purpurogeneiscleroticus 16S rRNA gene, type strain DSM 43156T	AJ621604	1498	ENA	68259 tax ID	*
[Ref.: #20218]	Streptomyces purpurogeneiscleroticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4818	D44385	121	ENA	68259 tax ID	*
[Ref.: #20218]	Streptomyces purpurogeneiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 13001	AB184250	1474	ENA	68259 tax ID	*
[Ref.: #20218]	Streptomyces purpurogeneiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 13903	AB184544	1480	ENA	68259 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces purpurogeneiscleroticus NRRL B-2952	GCA_001280155	contig	GenBank	68259 tax ID
[Ref.: #66792]	Streptomyces purpurogeneiscleroticus DSM 43156	GCA_020024005	scaffold	GenBank	68259 tax ID	*
[Ref.: #66792]	Streptomyces purpurogeneiscleroticus strain DSM 43156	68259.6	wgs	PATRIC	68259 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces purpurogeneiscleroticus strain DSM 43156 PATRIC: 68259.6
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces purpurogeneiscleroticus DSM 43156 NCBI: GCA_020024005.1
[Ref.: #69480]	flagellated	no	97.544	no
[Ref.: #69480]	gram-positive	yes	89.419	no
[Ref.: #69480]	anaerobic	no	98.789	no
[Ref.: #69480]	aerobic	yes	92.611	no
[Ref.: #69480]	halophile	no	86.606	no
[Ref.: #69480]	spore-forming	yes	94.864	no
[Ref.: #69480]	motile	no	90.357	no
[Ref.: #69480]	thermophile	no	96.037	yes
[Ref.: #69480]	glucose-util	yes	90.064	no
[Ref.: #69480]	glucose-ferment	no	89.631	no

Availability in culture collections External links

[Ref.: #10824]

Culture collection no.

DSM 43156, ATCC 19348, CBS 409.66, CBS 659.72, DSM 40271, IFO 13001, IFO 13358, IFO 13903, ISP 5271, JCM 3080, JCM 3103, JCM 4818, KCC A-0103, KCC S-0818, NBRC 13001, NBRC 13358, NBRC 13903, NCIB 10981, NRRL B-2952, RIA 1319, RIA 886, BCRC 13317, BCRC 15113, CGMCC 4.1929, CMI 112722, HAMBI 1061, NCIMB 10981, PCM 2306

[Ref.: #84593]

SI-ID 319091

References

#10824

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43156

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84593

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID319091.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces purpurogeneiscleroticus strain DSM 43156

Streptomyces purpurogeneiscleroticus DSM 43156

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