Schaalia odontolytica 2A.10 is an anaerobe, Gram-positive, rod-shaped human pathogen that was isolated from dental caries, deep carious lesions around teeth.
Gram-positive rod-shaped anaerobe human pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Actinomycetales |
| Family Actinomycetaceae |
| Genus Schaalia |
| Species Schaalia odontolytica |
| Full scientific name Schaalia odontolytica (Batty 1958) Nouioui et al. 2018 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7919 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 40306 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 7919 | BHI MEDIUM (DSMZ Medium 215) | Medium recipe at MediaDive | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water | ||
| 121388 | CIP Medium 6 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 90.717 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 121388 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68377 | 15824 ChEBI | D-fructose | + | builds acid from | from API NH |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | + | fermentation | from API Coryne |
| 68377 | 17634 ChEBI | D-glucose | + | builds acid from | from API NH |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68380 | 16024 ChEBI | D-mannose | - | fermentation | from API rID32A |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 121388 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 121388 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | + | fermentation | from API Coryne |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68377 | 17306 ChEBI | maltose | + | builds acid from | from API NH |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | + | reduction | from API Coryne |
| 68380 | 17632 ChEBI | nitrate | + | reduction | from API rID32A |
| 121388 | 17632 ChEBI | nitrate | + | reduction | |
| 121388 | 16301 ChEBI | nitrite | - | reduction | |
| 68377 | 18257 ChEBI | ornithine | - | degradation | from API NH |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | + | fermentation | from API Coryne |
| 68377 | 17992 ChEBI | sucrose | - | builds acid from | from API NH |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| 68377 | 16199 ChEBI | urea | - | hydrolysis | from API NH |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 121388 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 121388 | beta-galactosidase | + | 3.2.1.23 | |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68377 | beta-galactosidase | + | 3.2.1.23 | from API NH |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68377 | beta-lactamase | - | 3.5.2.6 | from API NH |
| 121388 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 121388 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 121388 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 68377 | gamma-glutamyltransferase | - | 2.3.2.2 | from API NH |
| 121388 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | glycin arylamidase | + | from API rID32A | |
| 121388 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 121388 | lipase | - | ||
| 68377 | lipase | - | from API NH | |
| 68382 | lipase (C 14) | - | from API zym | |
| 121388 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 121388 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 | from API NH |
| 121388 | oxidase | - | ||
| 121388 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68380 | proline-arylamidase | + | 3.4.11.5 | from API rID32A |
| 68377 | proline-arylamidase | + | 3.4.11.5 | from API NH |
| 68379 | pyrazinamidase | + | 3.5.1.B15 | from API Coryne |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 121388 | tryptophan deaminase | - | ||
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 121388 | tween esterase | - | ||
| 121388 | urease | - | 3.5.1.5 | |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68377 | urease | - | 3.5.1.5 | from API NH |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121388 | not determinedn.d. | - | - | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | +/- | - | - | - | - | + | + | - | - | + | - | - | - | - | - | - | - | - | - |
| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7919 | - | - | - | + | - | + | - | - | - | - | - | + | - | + | + | - | - | + | + | + | + | + | - | + | + | + | + | - | + | |
| 7919 | - | - | - | + | - | - | - | - | - | - | - | - | - | - | + | - | - | +/- | + | +/- | +/- | +/- | - | +/- | +/- | + | +/- | - | +/- | |
| 7919 | - | + | - | + | - | + | - | - | - | - | - | - | - | + | + | - | - | + | + | + | + | + | - | + | + | + | + | - | + | |
| 65633 | - | - | - | + | - | + | - | - | - | - | - | - | + | - | + | - | - | + | + | + | + | + | - | + | + | + | + | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host Body-Site | #Oral cavity and airways | #Tooth | |
| #Host Body-Site | #Other | #Wound |
Global distribution of 16S sequence X80504 (>99% sequence identity) for Schaalia odontolytica subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM3119154v1 assembly for Schaalia odontolytica LMG 18080 | complete | 1660 | 97.32 | ||||
| 66792 | 51670_G01 assembly for Schaalia odontolytica NCTC 9935 | contig | 1660 | 71.78 | ||||
| 124043 | ASM3129644v1 assembly for Schaalia odontolytica NCTC 9935 | contig | 1660 | 71.73 | ||||
| 124043 | ASM3129652v1 assembly for Schaalia odontolytica NCTC 9935 | contig | 1660 | 68.53 | ||||
| 124043 | ASM3129655v1 assembly for Schaalia odontolytica NCTC 9935 | contig | 1660 | 68.24 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Actinomyces odontolyticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 14871 | AB818950 | 1501 | 1660 | ||
| 20218 | Actinomyces odontolyticus 16S ribosomal RNA gene, partial sequence | AF058053 | 269 | 1660 | ||
| 20218 | Actinomyces odontolyticus 16S rRNA gene, strain CCUG 20536T | AJ234040 | 1412 | 1660 | ||
| 7919 | A.odontolyticus 16S rDNA | X80504 | 1394 | 1660 | ||
| 124043 | Schaalia odontolytica JCM 14871 gene for 16S rRNA, partial sequence. | LC752402 | 580 | 1660 | ||
| 124043 | Schaalia odontolytica strain NCTC 9935 16S ribosomal RNA gene, partial sequence. | OR133758 | 1548 | 1660 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 95.41 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 96.71 | no |
| 125439 | motility | BacteriaNetⓘ | no | 97.98 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 90.72 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.90 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 70.98 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 84.09 | no |
| 125438 | thermophilic | thermophileⓘ | no | 93.14 | yes |
| 125438 | aerobic | aerobicⓘ | no | 75.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 96.88 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Electrospun Nanofibers with Pomegranate Peel Extract as a New Concept for Treating Oral Infections. | Paczkowska-Walendowska M, Ignacyk M, Miklaszewski A, Plech T, Karpinski TM, Kwiatek J, Swora-Cwynar E, Walendowski M, Cielecka-Piontek J. | Materials (Basel) | 10.3390/ma17112558 | 2024 | ||
| Implementing the Design of Experiments (DoE) Concept into the Development of Mucoadhesive Tablets Containing Orange Peel Extract as a Potential Concept for the Treatment of Oral Infections. | Paczkowska-Walendowska M, Karpinski TM, Garbiec E, Walendowski M, Cielecka-Piontek J. | Materials (Basel) | 10.3390/ma17215234 | 2024 | ||
| No man's land: Species-specific formation of exclusion zones bordering Actinomyces graevenitzii microcolonies in nanoliter cultures. | Jalali F, Ellett F, Balani P, Duncan MJ, Dewhirst FE, Borisy GG, Irimia D. | Microbiologyopen | 10.1002/mbo3.1137 | 2021 | ||
| Gut Bacteria-derived Membrane Vesicles Induce Colonic Dysplasia by Inducing DNA Damage in Colon Epithelial Cells. | Miyakawa Y, Otsuka M, Shibata C, Seimiya T, Yamamoto K, Ishibashi R, Kishikawa T, Tanaka E, Isagawa T, Takeda N, Kamio N, Imai K, Fujishiro M. | Cell Mol Gastroenterol Hepatol | 10.1016/j.jcmgh.2024.01.010 | 2024 | ||
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Pathogenicity | An evaluation of the action of different root canal irrigants on facultative aerobic-anaerobic, obligate anaerobic, and microaerophilic bacteria. | D'Arcangelo C, Varvara G, De Fazio P | J Endod | 10.1016/S0099-2399(06)81170-2 | 1999 | |
| Genetics | Genome characterisation and comparative analysis of Schaalia dentiphila sp. nov. and its subspecies, S. dentiphila subsp. denticola subsp. nov., from the human oral cavity. | Tian X, Teo WFA, Yang Y, Dong L, Wong A, Chen L, Ahmed H, Choo SW, Jakubovics NS, Tan GYA. | BMC Microbiol | 10.1186/s12866-024-03346-w | 2024 | |
| Genetics | Genome characterization and taxonomy of Actinomyces acetigenes sp. nov., and Actinomyces stomatis sp. nov., previously isolated from the human oral cavity. | Tian X, Teo WFA, Wee WY, Yang Y, Ahmed H, Jakubovics NS, Choo SW, Tan GYA. | BMC Genomics | 10.1186/s12864-023-09831-2 | 2023 | |
| Phylogeny | Scrofimicrobium appendicitidis sp. nov., isolated from a patient with ruptured appendicitis. | Lao HY, Wong AYP, Ng TT, Wong RY, Yau MC, Lam JY, Siu GK. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006633 | 2025 |
| #7919 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19120 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40306 | ; Curators of the CIP; |
| #65633 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 20536 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68377 | Automatically annotated from API NH . |
| #68379 | Automatically annotated from API Coryne . |
| #68380 | Automatically annotated from API rID32A . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121388 | Collection of Institut Pasteur ; Curators of the CIP; CIP 101124 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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