Actinomyces naeslundii DSM 43013 is an anaerobe, Gram-positive, rod-shaped human pathogen that was isolated from human sinus.
Gram-positive rod-shaped anaerobe human pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Actinomycetales |
| Family Actinomycetaceae |
| Genus Actinomyces |
| Species Actinomyces naeslundii |
| Full scientific name Actinomyces naeslundii corrig. Thompson and Lovestedt 1951 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 32933 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 10673 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 10673 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 121221 | CIP Medium 6 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 121221 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68377 | 15824 ChEBI | D-fructose | + | builds acid from | from API NH |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | + | fermentation | from API Coryne |
| 68377 | 17634 ChEBI | D-glucose | + | builds acid from | from API NH |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68380 | 16024 ChEBI | D-mannose | + | fermentation | from API rID32A |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 121221 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 121221 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | + | builds acid from | from API 50CH acid |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68377 | 17306 ChEBI | maltose | + | builds acid from | from API NH |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | + | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | + | reduction | from API Coryne |
| 121221 | 17632 ChEBI | nitrate | + | reduction | |
| 121221 | 17632 ChEBI | nitrate | + | respiration | |
| 68380 | 17632 ChEBI | nitrate | + | reduction | from API rID32A |
| 121221 | 16301 ChEBI | nitrite | - | reduction | |
| 68377 | 18257 ChEBI | ornithine | - | degradation | from API NH |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | + | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | + | builds acid from | from API 50CH acid |
| 68380 | 16634 ChEBI | raffinose | + | fermentation | from API rID32A |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | + | fermentation | from API Coryne |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68377 | 17992 ChEBI | sucrose | + | builds acid from | from API NH |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| 68377 | 16199 ChEBI | urea | + | hydrolysis | from API NH |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 121221 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68380 | alanine arylamidase | - | 3.4.11.2 | from API rID32A |
| 121221 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68380 | alpha-galactosidase | + | 3.2.1.22 | from API rID32A |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68380 | alpha-glucosidase | + | 3.2.1.20 | from API rID32A |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 121221 | amylase | - | ||
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 121221 | beta-galactosidase | + | 3.2.1.23 | |
| 68377 | beta-galactosidase | + | 3.2.1.23 | from API NH |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68380 | beta-glucosidase | + | 3.2.1.21 | from API rID32A |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68377 | beta-lactamase | - | 3.5.2.6 | from API NH |
| 121221 | caseinase | + | 3.4.21.50 | |
| 121221 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | - | 1.11.1.6 | from API Coryne |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 121221 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 121221 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 68377 | gamma-glutamyltransferase | - | 2.3.2.2 | from API NH |
| 121221 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | histidine arylamidase | - | from API rID32A | |
| 68380 | L-arginine arylamidase | - | from API rID32A | |
| 121221 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucine arylamidase | + | 3.4.11.1 | from API rID32A |
| 68380 | leucyl glycin arylamidase | - | 3.4.11.1 | from API rID32A |
| 121221 | lipase | - | ||
| 68377 | lipase | - | from API NH | |
| 68382 | lipase (C 14) | - | from API zym | |
| 121221 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 121221 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 | from API NH |
| 121221 | oxidase | - | ||
| 121221 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68380 | phenylalanine arylamidase | + | from API rID32A | |
| 68377 | proline-arylamidase | - | 3.4.11.5 | from API NH |
| 68380 | proline-arylamidase | + | 3.4.11.5 | from API rID32A |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 68380 | serine arylamidase | - | from API rID32A | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 121221 | tryptophan deaminase | - | ||
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 121221 | tween esterase | +/- | ||
| 68380 | tyrosine arylamidase | + | from API rID32A | |
| 121221 | urease | + | 3.5.1.5 | |
| 68377 | urease | + | 3.5.1.5 | from API NH |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | |||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||
| @ref | 65608 | ||||||||||||||||||||||||
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| @ref | Reduction of nitrateNIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control fermentationControl | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65608 | + | + | - | - | - | + | + | - | + | + | - | - | not determinedn.d. | + | - | - | + | + | + | - | - | |
| 10673 | + | - | - | - | - | + | - | - | + | - | - | - | + | - | - | - | + | - | + | - | not determinedn.d. | |
| 10673 | + | + | - | - | - | + | +/- | - | + | - | - | - | + | - | - | - | + | + | + | - | - |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121221 | not determinedn.d. | + | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | + | - | - | - | - | + | - | + | + | + | - | + | + | + | + | + | - | - | + | - | - | - | - | - | - | - | - | + | - | - | + | - | + |
| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10673 | - | - | + | + | - | + | + | - | - | - | + | + | - | - | + | - | - | - | + | - | + | + | - | + | - | +/- | - | - | - | |
| 10673 | - | - | + | + | - | + | + | - | - | - | + | + | - | - | + | - | - | - | + | - | + | + | - | + | - | - | - | - | - | |
| 65608 | - | - | + | + | - | + | + | - | - | - | + | + | - | - | + | - | - | - | + | - | + | + | - | + | - | - | - | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Human | - | |
| #Host Body-Site | #Oral cavity and airways | - | |
| #Host Body-Site | #Other | #Head |
Global distribution of 16S sequence NR_113326 (>99% sequence identity) for Actinomyces naeslundii subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM3129665v1 assembly for Actinomyces naeslundii NCTC 10301 | contig | 1655 | 69.64 | ||||
| 67770 | ASM195658v1 assembly for Actinomyces naeslundii NCTC 10301 | scaffold | 1655 | 66.48 | ||||
| 124043 | ASM3129659v1 assembly for Actinomyces naeslundii ATCC 12104 | contig | 1655 | 64.7 | ||||
| 124043 | ASM3129671v1 assembly for Actinomyces naeslundii NCTC 10301 | contig | 1655 | 56.28 | ||||
| 66792 | AneasH279v1.0 assembly for Actinomyces naeslundii str. Howell 279 | contig | 1115803 | 24.35 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Actinomyces naeslundii 16S ribosomal RNA gene, partial sequence | AF058052 | 283 | 1655 | ||
| 20218 | Actinomyces naeslundii partial 16S rRNA | X53226 | 1376 | 1655 | ||
| 10673 | Actinomyces naeslundii strain CDC W826 16S ribosomal RNA, partial sequence | NR_037033 | 1450 | 1655 | ||
| 10673 | Actinomyces naeslundii strain JCM 8349 16S ribosomal RNA, partial sequence | NR_113326 | 1522 | 1655 | ||
| 67770 | Actinomyces naeslundii gene for 16S ribosomal RNA, partial cds, strain: JCM 8349 | AB618790 | 1522 | 1655 | ||
| 67770 | A.naeslundii 16S ribosomal RNA | M33911 | 1378 | 1655 | ||
| 67770 | A.naeslundii 16S rRNA gene | X81062 | 1450 | 1655 | ||
| 124043 | Actinomyces naeslundii strain NCTC 10301 16S ribosomal RNA gene, partial sequence. | OR133754 | 1472 | 1655 | ||
| 124043 | Actinomyces naeslundii strain ATCC 12104 16S ribosomal RNA gene, partial sequence. | OR133756 | 1567 | 1655 |
| 10673 | GC-content (mol%)66 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 92.96 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 93.28 | no |
| 125439 | motility | BacteriaNetⓘ | no | 90.76 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 86.35 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.59 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 75.46 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 82.61 | no |
| 125438 | aerobic | aerobicⓘ | no | 79.31 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 94.49 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 91.88 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Influence of species composition and cultivation condition on peri-implant biofilm dysbiosis in vitro. | Heine N, Bittroff K, Szafranski SP, Duitscher M, Behrens W, Vollmer C, Mikolai C, Kommerein N, Debener N, Frings K, Heisterkamp A, Scheper T, Torres-Mapa ML, Bahnemann J, Stiesch M, Doll-Nikutta K. | Front Oral Health | 10.3389/froh.2025.1649419 | 2025 | ||
| Antibacterial Effect of Ozone on Cariogenic Bacteria and Its Potential Prejudicial Effect on Dentin Bond Strength-An In Vitro Study. | Santos M, Leandro F, Barroso H, Delgado AHS, Proenca L, Polido M, Vasconcelos E Cruz J. | Pharmaceutics | 10.3390/pharmaceutics16050614 | 2024 | ||
| Fluorescence Spectroscopy Shows Porphyrins Produced by Cultured Oral Bacteria Differ Depending on Composition of Growth Media. | Lennon AM, Brune L, Techert S, Buchalla W. | Caries Res | 10.1159/000528731 | 2023 | ||
| Impact of antibacterial therapeutic agents on biofilm-tissue interactions in a 3D implant-tissue-oral-bacterial-biofilm model | Mikolai C, Woll K, Rahim M, Winkel A, Falk C, Stiesch M. | Sci Rep | 2025 | |||
| Optically accessible, 3D-printed flow chamber with integrated sensors for the monitoring of oral multispecies biofilm growth in vitro. | Debener N, Heine N, Legutko B, Denkena B, Prasanthan V, Frings K, Torres-Mapa ML, Heisterkamp A, Stiesch M, Doll-Nikutta K, Bahnemann J. | Front Bioeng Biotechnol | 10.3389/fbioe.2024.1483200 | 2024 | ||
| Colorimetric detection of oral bacteria using functionalized gold nanoparticles as a plasmonic biosensor array. | Wenck C, Leopoldt D, Habib M, Hegermann J, Stiesch M, Doll-Nikutta K, Heisterkamp A, Torres-Mapa ML. | Nanoscale Adv | 10.1039/d3na00477e | 2024 | ||
| Silver Nanoparticles Produced by Laser Ablation and Re-Irradiation Are Effective Preventing Peri-Implantitis Multispecies Biofilm Formation. | Perez-Tanoira R, Fernandez-Arias M, Potel C, Carballo-Fernandez R, Perez-Castro S, Boutinguiza M, Gorgolas M, Lusquinos F, Pou J. | Int J Mol Sci | 10.3390/ijms231912027 | 2022 | ||
| Adhesion Forces of Oral Bacteria to Titanium and the Correlation with Biophysical Cellular Characteristics. | Doll-Nikutta K, Winkel A, Yang I, Grote AJ, Meier N, Habib M, Menzel H, Behrens P, Stiesch M. | Bioengineering (Basel) | 10.3390/bioengineering9100567 | 2022 | ||
| Biocompatible liquid-infused titanium minimizes oral biofilm adhesion in flow chamber and 3D implant-tissue-biofilm in vitro models | Doll-Nikutta K, Mikolai C, Heine N, Kurselis K, Fadeeva E, Debener N, Legutko B, Kreuzkamp C, Prasanthan V, Bahnemann J, Chichkov B, Stiesch M. | Bioact Mater | 2025 | |||
| Effect of Low-Level Laser Irradiation (810 nm) on the Proliferation and Differentiation of Osteoblast-Like Cells Cultured on SLA Titanium Discs Exposed to a Peri-implantitis Environment. | Zampa EP, Kyriakidou K, Papaparaskevas J, Pepelassi E, Karoussis IK. | J Lasers Med Sci | 10.34172/jlms.2023.57 | 2023 | ||
| Dual Antibacterial and Soft-Tissue-Integrative Effect of Combined Strontium Acetate and Silver Nitrate on Peri-Implant Environment: Insights from Multispecies Biofilms and a 3D Coculture Model. | Kheirmand-Parizi M, Doll-Nikutta K, Mikolai C, Wirth D, Menzel H, Stiesch M. | ACS Appl Mater Interfaces | 10.1021/acsami.5c01093 | 2025 | ||
| Probiotic Effects on Multispecies Biofilm Composition, Architecture, and Caries Activity In Vitro. | Chen Z, Schlafer S, Gostemeyer G, Schwendicke F. | Microorganisms | 10.3390/microorganisms8091272 | 2020 | ||
| Metabolism | Effect of reduced nutritional supply on the metabolic activity and survival of cariogenic bacteria in vitro. | Ganas P, Schwendicke F. | J Oral Microbiol | 10.1080/20002297.2019.1605788 | 2019 | |
| Root Caries Preventive Effect of Varnishes Containing Fluoride or Fluoride + Chlorhexidine/Cetylpyridinium Chloride In Vitro. | Gostemeyer G, Woike H, Paris S, Schwendicke F, Schlafer S. | Microorganisms | 10.3390/microorganisms9040737 | 2021 | ||
| Plant-based oral care product exhibits antibacterial effects on different stages of oral multispecies biofilm development in vitro. | Kommerein N, Weigel AJ, Stiesch M, Doll K. | BMC Oral Health | 10.1186/s12903-021-01504-4 | 2021 | ||
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| Study of humoral immunity to commensal oral bacteria in human infants demonstrates the presence of secretory immunoglobulin A antibodies reactive with Actinomyces naeslundii genospecies 1 and 2 ribotypes. | Cole MF, Evans MK, Kirchherr JL, Sheridan MJ, Bowden GH. | Clin Diagn Lab Immunol | 10.1128/cdli.11.3.473-482.2004 | 2004 | ||
| Pathogenicity | Influences of trans-trans farnesol, a membrane-targeting sesquiterpenoid, on Streptococcus mutans physiology and survival within mixed-species oral biofilms. | Jeon JG, Pandit S, Xiao J, Gregoire S, Falsetta ML, Klein MI, Koo H. | Int J Oral Sci | 10.4248/ijos11038 | 2011 | |
| Subgingival microbiota in adult Down syndrome periodontitis. | Khocht A, Yaskell T, Janal M, Turner BF, Rams TE, Haffajee AD, Socransky SS. | J Periodontal Res | 10.1111/j.1600-0765.2011.01459.x | 2012 | ||
| Combined Application of Bacterial Predation and Violacein to Kill Polymicrobial Pathogenic Communities. | Im H, Choi SY, Son S, Mitchell RJ. | Sci Rep | 10.1038/s41598-017-14567-7 | 2017 | ||
| In Vitro-Activity of Er:YAG Laser in Comparison with other Treatment Modalities on Biofilm Ablation from Implant and Tooth Surfaces. | Eick S, Meier I, Spoerle F, Bender P, Aoki A, Izumi Y, Salvi GE, Sculean A. | PLoS One | 10.1371/journal.pone.0171086 | 2017 | ||
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| Leaves and Fruits Preparations of Pistacia lentiscus L.: A Review on the Ethnopharmacological Uses and Implications in Inflammation and Infection. | Milia E, Bullitta SM, Mastandrea G, Szotakova B, Schoubben A, Langhansova L, Quartu M, Bortone A, Eick S. | Antibiotics (Basel) | 10.3390/antibiotics10040425 | 2021 | ||
| Antibiotic effects on bacterial profile in osteonecrosis of the jaw. | Ji X, Pushalkar S, Li Y, Glickman R, Fleisher K, Saxena D. | Oral Dis | 10.1111/j.1601-0825.2011.01848.x | 2012 | ||
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| Pathogenicity | Novel riboswitch-binding flavin analog that protects mice against Clostridium difficile infection without inhibiting cecal flora. | Blount KF, Megyola C, Plummer M, Osterman D, O'Connell T, Aristoff P, Quinn C, Chrusciel RA, Poel TJ, Schostarez HJ, Stewart CA, Walker DP, Wuts PG, Breaker RR. | Antimicrob Agents Chemother | 10.1128/aac.01282-15 | 2015 | |
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| Microbial Biofilm Decontamination on Dental Implant Surfaces: A Mini Review. | Dhaliwal JS, Abd Rahman NA, Ming LC, Dhaliwal SKS, Knights J, Albuquerque Junior RF. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.736186 | 2021 | ||
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| Anti-Planktonic and Anti-Biofilm Properties of Pentacyclic Triterpenes-Asiatic Acid and Ursolic Acid as Promising Antibacterial Future Pharmaceuticals. | Sycz Z, Tichaczek-Goska D, Wojnicz D. | Biomolecules | 10.3390/biom12010098 | 2022 | ||
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| Specificity of coaggregation reactions between human oral streptococci and strains of Actinomyces viscosus or Actinomyces naeslundii. | Cisar JO, Kolenbrander PE, McIntire FC. | Infect Immun | 10.1128/iai.24.3.742-752.1979 | 1979 | ||
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| Phylogeny | Distribution and phylogenetic analysis of family 19 chitinases in Actinobacteria. | Kawase T, Saito A, Sato T, Kanai R, Fujii T, Nikaidou N, Miyashita K, Watanabe T. | Appl Environ Microbiol | 10.1128/aem.70.2.1135-1144.2004 | 2004 | |
| Metabolism | Role of urease enzymes in stability of a 10-species oral biofilm consortium cultivated in a constant-depth film fermenter. | Shu M, Browngardt CM, Chen YY, Burne RA. | Infect Immun | 10.1128/iai.71.12.7188-7192.2003 | 2003 | |
| Metabolism | Specific and nonspecific inhibition of adhesion of oral actinomyces and streptococci to erythrocytes and polystyrene by caseinoglycopeptide derivatives. | Neeser JR, Chambaz A, Del Vedovo S, Prigent MJ, Guggenheim B. | Infect Immun | 10.1128/iai.56.12.3201-3208.1988 | 1988 | |
| Pathogenicity | Removal of Dental Biofilms with an Ultrasonically Activated Water Stream. | Howlin RP, Fabbri S, Offin DG, Symonds N, Kiang KS, Knee RJ, Yoganantham DC, Webb JS, Birkin PR, Leighton TG, Stoodley P | J Dent Res | 10.1177/0022034515589284 | 2015 | |
| Pathogenicity | Effect of water-aging on the antimicrobial activities of an ORMOSIL-containing orthodontic acrylic resin. | Gong SQ, Epasinghe DJ, Zhou B, Niu LN, Kimmerling KA, Rueggeberg FA, Yiu CK, Mao J, Pashley DH, Tay FR | Acta Biomater | 10.1016/j.actbio.2013.02.031 | 2013 | |
| Pathogenicity | Quaternary ammonium silane-functionalized, methacrylate resin composition with antimicrobial activities and self-repair potential. | Gong SQ, Niu LN, Kemp LK, Yiu CK, Ryou H, Qi YP, Blizzard JD, Nikonov S, Brackett MG, Messer RL, Wu CD, Mao J, Bryan Brister L, Rueggeberg FA, Arola DD, Pashley DH, Tay FR | Acta Biomater | 10.1016/j.actbio.2012.05.031 | 2012 | |
| Pathogenicity | Effect of saliva viscosity on the co-aggregation between oral streptococci and Actinomyces naeslundii. | Kitada K, Oho T | Gerodontology | 10.1111/j.1741-2358.2011.00595.x | 2011 | |
| [Initial study on the discrimination of oral common Actinomycetes with metabonomics method]. | Li MY, Guo Q, Zhou XD, Xiong P, Jia XM, Xiao XR, Li W, Xiao LY | Hua Xi Kou Qiang Yi Xue Za Zhi | 2009 | |||
| Cultivation | Regulation of urease expression of Actinomyces naeslundii in biofilms in response to pH and carbohydrate. | Liy Y, Dan J, Tao H, Xuedong Z | Oral Microbiol Immunol | 10.1111/j.1399-302X.2008.00430.x | 2008 | |
| Pathogenicity | Impact of growth conditions on susceptibility of five microbial species to alkaline stress. | Brandle N, Zehnder M, Weiger R, Waltimo T | J Endod | 10.1016/j.joen.2008.02.027 | 2008 | |
| Metabolism | Regulation of urease gene of Actinomyces naeslundii in biofilms in response to environmental factors. | Liu Y, Hu T, Jiang D, Zhang J, Zhou X | FEMS Microbiol Lett | 10.1111/j.1574-6968.2007.00959.x | 2007 | |
| Enzymology | Characterization of the Actinomyces naeslundii ureolysis and its role in bacterial aciduricity and capacity to modulate pH homeostasis. | Liu Y, Hu T, Zhang J, Zhou X | Microbiol Res | 10.1016/j.micres.2005.11.002 | 2006 | |
| Enzymology | Production and characterization of species-specific monoclonal antibodies against Actinomyces naeslundii and Lactobacillus casei. | Gu F, Ma X, Lux R, Shi W | Hybrid Hybridomics | 10.1089/153685902321044007 | 2002 | |
| Metabolism | Roles of fructosyltransferase and levanase-sucrase of Actinomyces naeslundii in fructan and sucrose metabolism. | Bergeron LJ, Burne RA | Infect Immun | 10.1128/IAI.69.9.5395-5402.2001 | 2001 | |
| Enzymology | Analysis of urease expression in Actinomyces naeslundii WVU45. | Morou-Bermudez E, Burne RA | Infect Immun | 10.1128/IAI.68.12.6670-6676.2000 | 2000 | |
| Metabolism | Characterization of the fructosyltransferase gene of Actinomyces naeslundii WVU45. | Bergeron LJ, Morou-Bermudez E, Burne RA | J Bacteriol | 10.1128/JB.182.13.3649-3654.2000 | 2000 | |
| Pathogenicity | In vitro antimicrobial activity of propolis and Arnica montana against oral pathogens. | Koo H, Gomes BP, Rosalen PL, Ambrosano GM, Park YK, Cury JA | Arch Oral Biol | 10.1016/s0003-9969(99)00117-x | 2000 | |
| Metabolism | Secretory immunoglobulin A heavy chain presents Galbeta1-3GalNAc binding structures for Actinomyces naeslundii genospecies 1. | Bratt P, Boren, Boren T, Str omberg N | J Dent Res | 10.1177/00220345990780060701 | 1999 | |
| Pathogenicity | Genetic and physiologic characterization of urease of Actinomyces naeslundii. | Morou-Bermudez E, Burne RA | Infect Immun | 10.1128/IAI.67.2.504-512.1999 | 1999 | |
| Pathogenicity | Anaerobic killing of oral streptococci by reduced, transition metal cations. | Dunning JC, Ma Y, Marquis RE | Appl Environ Microbiol | 10.1128/AEM.64.1.27-33.1998 | 1998 | |
| Genetics | Synthesis and function of Actinomyces naeslundii T14V type 1 fimbriae require the expression of additional fimbria-associated genes. | Yeung MK, Ragsdale PA | Infect Immun | 10.1128/iai.65.7.2629-2639.1997 | 1997 | |
| Pathogenicity | Cell surface polypeptide CshA mediates binding of Streptococcus gordonii to other oral bacteria and to immobilized fibronectin. | McNab R, Holmes AR, Clarke JM, Tannock GW, Jenkinson HF | Infect Immun | 10.1128/iai.64.10.4204-4210.1996 | 1996 | |
| Phylogeny | Detection of Actinomyces species using nonradioactive riboprobes coupled with polymerase chain reaction. | Kiyama M, Hiratsuka K, Saito S, Shiroza T, Takiguchi H, Abiko Y | Biochem Mol Med | 10.1006/bmme.1996.0043 | 1996 | |
| Metabolism | Putative glycoprotein and glycolipid polymorphonuclear leukocyte receptors for the Actinomyces naeslundii WVU45 fimbrial lectin. | Sandberg AL, Ruhl S, Joralmon RA, Brennan MJ, Sutphin MJ, Cisar JO | Infect Immun | 10.1128/iai.63.7.2625-2631.1995 | 1995 | |
| Metabolism | Surface-associated properties of Actinomyces strains and their potential relation to pathogenesis. | Loo CY, Willcox MD, Knox KW | Oral Microbiol Immunol | 10.1111/j.1399-302x.1994.tb00208.x | 1994 | |
| Phylogeny | Characterization of Actinomyces with genomic DNA fingerprints and rRNA gene probes. | Bowden G, Johnson J, Schachtele C | J Dent Res | 10.1177/00220345930720080201 | 1993 | |
| Metabolism | Interactions of Actinomyces naeslundii strains T14V and ATCC 12104 with saliva, collagen and fibrinogen. | Hawkins BW, Cannon RD, Jenkinson HF | Arch Oral Biol | 10.1016/0003-9969(93)90191-n | 1993 | |
| Stress | Coaggregation of Prevotella intermedia with oral Actinomyces species. | Nesbitt WE, Fukushima H, Leung KP, Clark WB | Infect Immun | 10.1128/iai.61.5.2011-2014.1993 | 1993 | |
| Metabolism | Binding of Actinomyces viscosus to collagen: association with the type 1 fimbrial adhesin. | Liu T, Gibbons RJ, Hay DI, Skobe Z | Oral Microbiol Immunol | 10.1111/j.1399-302x.1991.tb00443.x | 1991 | |
| Metabolism | Characterization of the binding of Actinomyces naeslundii (ATCC 12104) and Actinomyces viscosus (ATCC 19246) to glycosphingolipids, using a solid-phase overlay approach. | Stromberg N, Karlsson KA | J Biol Chem | S0021-9258(19)38584-9 | 1990 | |
| Genetics | Sequence homology between the subunits of two immunologically and functionally distinct types of fimbriae of Actinomyces spp. | Yeung MK, Cisar JO | J Bacteriol | 10.1128/jb.172.5.2462-2468.1990 | 1990 | |
| Pathogenicity | Cellular coaggregation of oral Streptococcus milleri with actinomyces. | Eifuku H, Yakushiji T, Mizuno J, Kudo N, Inoue M | Infect Immun | 10.1128/iai.58.1.163-168.1990 | 1990 | |
| Enzymology | Cloning and nucleotide sequence of a gene for Actinomyces naeslundii WVU45 type 2 fimbriae. | Yeung MK, Cisar JO | J Bacteriol | 10.1128/jb.170.9.3803-3809.1988 | 1988 | |
| Metabolism | Human salivary acidic proline-rich proteins and statherin promote the attachment of Actinomyces viscosus LY7 to apatitic surfaces. | Gibbons RJ, Hay DI | Infect Immun | 10.1128/iai.56.2.439-445.1988 | 1988 | |
| Metabolism | Binding of Actinomyces naeslundii to glycosphingolipids. | Brennan MJ, Joralmon RA, Cisar JO, Sandberg AL | Infect Immun | 10.1128/iai.55.2.487-489.1987 | 1987 | |
| Pathogenicity | Lectin-dependent attachment of Actinomyces naeslundii to receptors on epithelial cells. | Brennan MJ, Cisar JO, Vatter AE, Sandberg AL | Infect Immun | 10.1128/iai.46.2.459-464.1984 | 1984 | |
| Exclusive presence of lactose-sensitive fimbriae on a typical strain (WVU45) of Actinomyces naeslundii. | Cisar JO, David VA, Curl SH, Vatter AE | Infect Immun | 10.1128/iai.46.2.453-458.1984 | 1984 | ||
| Pathogenicity | Neuraminidase-activated attachment of Actinomyces naeslundii ATCC 12104 to human buccal epithelial cells. | Saunders JM, Miller CH | J Dent Res | 10.1177/00220345830620100501 | 1983 | |
| Pathogenicity | Structural preferences of beta-galactoside-reactive lectins on Actinomyces viscosus T14V and Actinomyces naeslundii WVU45. | McIntire FC, Crosby LK, Barlow JJ, Matta KL | Infect Immun | 10.1128/iai.41.2.848-850.1983 | 1983 | |
| Stress | Isolation and characterization of coaggregation-defective mutants of Actinomyces viscosus, Actinomyces naeslundii, and Streptococcus sanguis. | Kolenbrander PE | Infect Immun | 10.1128/iai.37.3.1200-1208.1982 | 1982 | |
| Enzymology | Novel antigens of oral Actinomyces species prepared from a cell wall enzyme lysate. | Hamada S, Okahashi N, Kimura S, Imanishi H, Koga T, Kawata S, Michalek SM, McGhee JR | Jpn J Med Sci Biol | 10.7883/yoken1952.35.171 | 1982 | |
| Pathogenicity | Differences in the adsorptive behavior of human strains of Actinomyces viscosus and Actinomyces naeslundii to saliva-treated hydroxyapatite surfaces. | Qureshi JV, Gibbons RJ | Infect Immun | 10.1128/iai.31.1.261-266.1981 | 1981 | |
| Pathogenicity | Attachment of Actinomyces naeslundii to human buccal epithelial cells. | Saunders JM, Miller CH | Infect Immun | 10.1128/iai.29.3.981-989.1980 | 1980 | |
| Metabolism | Degradation of sucrose by whole cells and plaque of Actinomyces naeslundii. | Miller CH | Infect Immun | 10.1128/iai.10.6.1280-1291.1974 | 1974 | |
| Genetics | Genome characterisation and comparative analysis of Schaalia dentiphila sp. nov. and its subspecies, S. dentiphila subsp. denticola subsp. nov., from the human oral cavity. | Tian X, Teo WFA, Yang Y, Dong L, Wong A, Chen L, Ahmed H, Choo SW, Jakubovics NS, Tan GYA. | BMC Microbiol | 10.1186/s12866-024-03346-w | 2024 | |
| 'Enterococcus timonensis' sp. nov., 'Actinomyces marseillensis' sp. nov., 'Leptotrichia massiliensis' sp. nov., 'Actinomyces pacaensis' sp. nov., 'Actinomyces oralis' sp. nov., 'Actinomyces culturomici' sp. nov. and 'Gemella massiliensis' sp. nov., new bacterial species isolated from the human respiratory microbiome. | Fonkou MDM, Bilen M, Cadoret F, Fournier PE, Dubourg G, Raoult D. | New Microbes New Infect | 10.1016/j.nmni.2017.12.005 | 2018 | ||
| Genetics | Noncontiguous finished genome sequences and descriptions of Actinomyces ihuae, Actinomyces bouchesdurhonensis, Actinomyces urinae, Actinomyces marseillensis, Actinomyces mediterranea and Actinomyces oralis sp. nov. identified by culturomics. | Mbogning Fonkou MD, Mailhe M, Ndongo S, Ricaboni D, Morand A, Cornu F, Tidjani Alou M, Bilen M, Andrieu C, Levasseur A, Cadoret F, Raoult D. | New Microbes New Infect | 10.1016/j.nmni.2018.06.004 | 2018 | |
| Phylogeny | Emended description of Actinomyces naeslundii and descriptions of Actinomyces oris sp. nov. and Actinomyces johnsonii sp. nov., previously identified as Actinomyces naeslundii genospecies 1, 2 and WVA 963. | Henssge U, Do T, Radford DR, Gilbert SC, Clark D, Beighton D | Int J Syst Evol Microbiol | 10.1099/ijs.0.000950-0 | 2009 |
| #10673 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43013 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #32933 | ; Curators of the CIP; |
| #65608 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2238 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68377 | Automatically annotated from API NH . |
| #68379 | Automatically annotated from API Coryne . |
| #68380 | Automatically annotated from API rID32A . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121221 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103128 |
| #124042 | Johannes Wittmann, Clara Rolland, Lorenz Reimer, Joaquim Sardà: PhageDive . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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