Name: Streptomyces melanosporofaciens 1573
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15399

Type strain:

Species: Streptomyces melanosporofaciens

Strain Designation: 1573

Culture col. no.: DSM 40318, ATCC 25473, CBS 883.69, IFO 13061, ISP 5318, JCM 4495, NBRC 13061, RIA 1253, BCRC 12064, CGMCC 4.1742, NCIMB 12978, NRRL B-12234, VKM Ac-1864

Strain history: KCC S-0495 <-- T. Furumai <-- SAJ <-- ISP 5318 <-- Farmitalia FI 1573.

NCBI tax ID(s): 67327 (species)

SI-ID 389365

ATCC 25473, IFO 13061, DSM 40318, JCM 4495, CCRC 12064, NCIMB 12978, NRRL B-12234, VKM Ac-1864, CBS 883.69, NBRC 13061, BCRC 12064, BCC 7127, CGMCC 4.1742

Special Collections

DSMZ
JCM

Section

Streptomyces melanosporofaciens 1573 is a spore-forming bacterium that produces antibiotic compounds and was isolated from soil.

antibiotic compound production
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces melanosporofaciens**
	Full Scientific Name (LPSN)	Streptomyces melanosporofaciens Arcamone et al. 1959 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9456]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %92.715

[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.761
[Ref.: #69481]	Ability of spore formation	yes Confidence in %99

[Ref.: #9456]	Name of produced compound	elaiophylin(=azalomycin B)
[Ref.: #9456]	Name of produced compound	melanosporin
[Ref.: #67770]	Name of produced compound	Melanosporin

	Metabolite production	Metabolite	Production
[Ref.: #67770]		elaiophylin ChEBI	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9456]	Sample type/isolated from	soil
[Ref.: #9456]	Country	Italy
[Ref.: #9456]	Country ISO 3 Code	ITA
[Ref.: #9456]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces melanosporofaciens strain CGMCC 4.1742 16S ribosomal RNA gene, partial sequence	HQ244452	1401	GenBank ENA	67327 tax ID	*
[Ref.: #20218]	Streptomyces melanosporofaciens gene for 16S ribosomal RNA, partial sequence, strain: JCM 4495	D44187	121	GenBank ENA	67327 tax ID	*
[Ref.: #20218]	Streptomyces melanosporofaciens gene for 16S rRNA, partial sequence, strain: NBRC 13061	AB184283	1475	GenBank ENA	67327 tax ID	*
[Ref.: #20218]	Streptomyces melanosporofaciens 16S rRNA gene, strain NRRL B-12234T	AJ271887	1483	GenBank ENA	67327 tax ID	*
[Ref.: #20218]	Streptomyces melanosporofaciens partial 16S rRNA gene, type strain NRRL B-12234T	AJ391837	1483	GenBank ENA	67327 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces melanosporofaciens DSM 40318	GCA_900105695	contig	GenBank ENA	67327 tax ID
[Ref.: #66792]	Streptomyces melanosporofaciens strain DSM 40318	67327.3	wgs	PATRIC	67327 tax ID	*
[Ref.: #66792]	Streptomyces melanosporofaciens DSM 40318	2634166371	draft	JGI IMG/M	67327 tax ID	*

[Ref.: #67770]	GC-content	71 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	71 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces melanosporofaciens strain DSM 40318 PATRIC: 67327.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	99	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces melanosporofaciens strain DSM 40318 PATRIC: 67327.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	86.2	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.331	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.761	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	92.715	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.5	no

Availability in culture collections External links

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Culture collection no.

DSM 40318, ATCC 25473, CBS 883.69, IFO 13061, ISP 5318, JCM 4495, NBRC 13061, RIA 1253, BCRC 12064, CGMCC 4.1742, NCIMB 12978, NRRL B-12234, VKM Ac-1864

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SI-ID 389365

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	[Anionic carbohydrate-containing cell wall polymers of Streptomyces melanosporofaciens and related species].	Tul'skaia EM, Shashkov AS, Bueva OV, Evtushenko LI	Mikrobiologiia		2007	*

References

#9456

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40318

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84488

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389365.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces melanosporofaciens strain DSM 40318

Streptomyces melanosporofaciens strain DSM 40318

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