Streptomyces griseus Duché is a bacterium that builds an aerial mycelium and was isolated from manure.
genome sequence 16S sequence Bacteria
SI-ID 386975
| @ref 20215 |
|
Last LPSN update
2026-02-09 11:21:36 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces griseus |
| Full scientific name Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980) |
|
Synonyms (13)
"Actinomyces setonii"
Streptomyces setonii "Actinomyces globisporus subsp. flavofuscus" Streptomyces acrimycini "Actinomyces fimicarius" Streptomyces baarnensis "Actinomyces acrimycini" Streptomyces fimicarius Streptomyces globisporus subsp. flavofuscus "Actinomyces griseus" Streptomyces caviscabies Streptomyces flavofuscus Streptomyces erumpens |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9460 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive  | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 19810 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19810 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19810 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19810 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19810 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19810 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 9460 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125438 | aerobe | 92.716 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 91.956 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 19810 | 22599 ChEBI | arabinose | + | ||
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 19810 | 62968 ChEBI | cellulose | + | ||
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 19810 | 28757 ChEBI | fructose | + | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 19810 | 17234 ChEBI | glucose | + | ||
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 19810 | 29864 ChEBI | mannitol | + | ||
| 19810 | 17268 ChEBI | myo-inositol | +/- | ||
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 19810 | 16634 ChEBI | raffinose | +/- | ||
| 19810 | 26546 ChEBI | rhamnose | + | ||
| 19810 | 17992 ChEBI | sucrose | +/- | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 19810 | 18222 ChEBI | xylose | +/- |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | + | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | + | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | + | from API zym | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| 9460 | Sample typemanure |
Global distribution of 16S sequence AY999784 (>99% sequence identity) for Streptomyces from Microbeatlas 
 Aquatic Samples |
286 |
 Soil Samples |
2441 |
 Animal Samples |
1009 |
 Plant Samples |
294 |
| Total Samples | 4030 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | |
|---|---|---|---|---|---|---|---|
| 67770 | ASM215434v1 assembly for Streptomyces griseus NRRL ISP-5322 | scaffold | GCA_002154345   | 67295.3  | 2791355424  | 67295 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 9460 | Streptomyces fimicarius strain ISP 5322 16S ribosomal RNA gene, partial sequence | AY999784 | 1496 |  | 67295 | |
| 9460 | Streptomyces fimicarius gene for 16S rRNA, partial sequence, strain: NBRC 13037 | AB184269 | 1474 | | 67295 | |
| 124043 | Streptomyces fimicarius gene for 16S ribosomal RNA, partial sequence, strain: JCM 4472. | D44167 | 120 | | 67295 | |
| 124043 | Streptomyces griseus strain NRRL ISP-5322 16S ribosomal RNA gene, partial sequence. | OQ618965 | 1322 | | 1911 | |
| 124043 | Streptomyces griseus strain NRRL ISP-5322 16S ribosomal RNA gene, partial sequence. | PV264895 | 1297 | | 1911 | |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 74 | fluorimetric |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Screening of natural phenazine producers for electroactivity in bioelectrochemical systems. | Franco A, Elbahnasy M, Rosenbaum MA. | Microb Biotechnol | 10.1111/1751-7915.14199 | 2023 | | |
| Phylogeny | Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species. | Rong X, Huang Y. | Int J Syst Evol Microbiol | 10.1099/ijs.0.012419-0 | 2010 | |
| Phylogeny | Reassessment of the status of Streptomyces setonii and reclassification of Streptomyces fimicarius as a later synonym of Streptomyces setonii and Streptomyces albovinaceus as a later synonym of Streptomyces globisporus based on combined 16S rRNA/gyrB gene sequence analysis. | Kim KO, Shin KS, Kim MN, Shin KS, Labeda DP, Han JH, Kim SB. | Int J Syst Evol Microbiol | 10.1099/ijs.0.040287-0 | 2012 | |
| Phylogeny | Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis. | Labeda DP, Dunlap CA, Rong X, Huang Y, Doroghazi JR, Ju KS, Metcalf WW. | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0824-0 | 2017 | |
| Phylogeny | Streptomyces silvae sp. nov., isolated from forest soil. | Besaury L, Martinet L, Muhle E, Clermont D, Remond C | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005147 | 2021 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive15145.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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