Name: Streptomyces brasiliensis CCIB 71 (IMUR 2572)
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15057

Type strain:

Species: Streptomyces brasiliensis

Strain Designation: CCIB 71 (IMUR 2572)

Culture col. no.: DSM 43159, ATCC 23727, CUB 126, IFO 12596, JCM 3086, KCC A-0086, NBRC 12596, RIA 911, BCRC 16849, CBS 520.68, CGMCC 4.1486, IFM 1210, KCTC 9071, KCTC 9195, NBRC 101283, NRRL B-3327, VKM Ac-1310, VKM Ac-656

Strain history: KCC A-0086 <-- J. O. Falcão de Morais CCIB 71 (IMUR 2572).

NCBI tax ID(s): 1954 (species)

SI-ID 45720

ATCC 23727, DSM 43159, IFO 12596, JCM 3086, KCTC 9071, NRRL B-3327, VKM Ac-1310, VKM Ac-656, CBS 520.68, IMET 43493, KCTC 9195, NBRC 12596, NBRC 101283, BCRC 16849, CCRC 16849, CGMCC 4.1486

Special Collections

Other strains from Streptomyces brasiliensis

Section

Streptomyces brasiliensis CCIB 71 is a spore-forming bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces brasiliensis**
	Full Scientific Name (LPSN)	Streptomyces brasiliensis (Falcão de Morais et al. 1966) Goodfellow et al. 1986

	Synonym	Elytrosporangium brasiliense
	Synonym	Elytrosporangium brasiliensis

Information on morphological and physiological properties Morphology

[Ref.: #19550]	Colony color	Beige
[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 2

[Ref.: #19550]	Colony color	Beige
[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 5

[Ref.: #19550]	Colony color	Beige
[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 6

[Ref.: #19550]	Colony color	Brown beige
[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 7

[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 3

[Ref.: #19550]	Incubation period	10-14 days
[Ref.: #19550]	Cultivation medium used	ISP 4

[Ref.: #19550]	Multicellular complex forming ability	yes
[Ref.: #19550]	Multicellular complex name	Aerial Mycelium
[Ref.: #19550]	Multicellular complex color	Cream
[Ref.: #19550]	Medium Name (multicellularity)	ISP 2

[Ref.: #19550]	Multicellular complex forming ability	yes
[Ref.: #19550]	Multicellular complex name	Aerial Mycelium
[Ref.: #19550]	Multicellular complex color	Light grey
[Ref.: #19550]	Medium Name (multicellularity)	ISP 3

[Ref.: #19550]	Multicellular complex forming ability	yes
[Ref.: #19550]	Multicellular complex name	Aerial Mycelium
[Ref.: #19550]	Multicellular complex color	Cream
[Ref.: #19550]	Medium Name (multicellularity)	ISP 4

[Ref.: #19550]	Multicellular complex forming ability	no
[Ref.: #19550]	Medium Name (multicellularity)	ISP 5

[Ref.: #19550]	Multicellular complex forming ability	no
[Ref.: #19550]	Medium Name (multicellularity)	ISP 6

[Ref.: #19550]	Multicellular complex forming ability	no
[Ref.: #19550]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10827]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10827]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

[Ref.: #19550]

Culture medium

ISP 2

[Ref.: #19550]

Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

[Ref.: #19550]

Culture medium growth

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Culture medium composition

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[Ref.: #19550]

Culture medium

ISP 4

[Ref.: #19550]

Culture medium growth

[Ref.: #19550]

Culture medium composition

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[Ref.: #19550]

Culture medium

ISP 5

[Ref.: #19550]

Culture medium growth

[Ref.: #19550]

Culture medium composition

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[Ref.: #19550]

Culture medium

ISP 6

[Ref.: #19550]

Culture medium growth

[Ref.: #19550]

Culture medium composition

expand / minimize

[Ref.: #19550]

Culture medium

ISP 7

[Ref.: #19550]

Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #10827]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #10827]

Culture medium growth

[Ref.: #10827]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10827]

Culture medium composition

expand / minimize

[Ref.: #10827]

Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

[Ref.: #10827]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #10827]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #10827]	growth	28 °C
[Ref.: #19550]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %90.072
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

[Ref.: #10827]

Name of produced compound

neomycin

[Ref.: #67770]

Observation

quinones: MK-9(H₈)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19550]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19550]	cellulose ChEBI	+
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #19550]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19550]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #19550]	mannitol ChEBI	+
[Ref.: #19550]	myo-inositol ChEBI	+
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19550]	raffinose ChEBI	+
[Ref.: #19550]	rhamnose ChEBI	+
[Ref.: #19550]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19550]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #67770]	neomycin ChEBI	yes
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19550]	403	+	+	+	+	+	-	-	-	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19550]	395	not determinedn.d.	+	+	-	-	+	+	+	-	-	+	+	+	-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10827]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Alianca, North of Pernambuco
[Ref.: #67770]	Country	Brazil
[Ref.: #67770]	Country ISO 3 Code	BRA
[Ref.: #67770]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB184106 (>99% sequence identity) for Staphylococcus from Microbeatlas

Aquatic Samples	1554
Soil Samples	930
Animal Samples	23674
Plant Samples	763
Total Samples	26921

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10827]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19550]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces brasiliensis partial 16S rRNA	X53162	1356	GenBank ENA	1954 tax ID	*
[Ref.: #20218]	Streptomyces brasiliensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 3086	D43978	121	GenBank ENA	1954 tax ID	*
[Ref.: #20218]	Streptomyces brasiliensis gene for 16S rRNA, partial sequence, strain: NBRC 101283	AB249981	1458	GenBank ENA	1954 tax ID	*
[Ref.: #20218]	Streptomyces brasiliensis gene for 16S rRNA, partial sequence, strain: NBRC 12596	AB184106	1438	GenBank ENA	1954 tax ID	*
[Ref.: #20218]	Streptomyces brasiliensis strain NRRL B-3327 16S ribosomal RNA gene, partial sequence	EF626594	1505	GenBank ENA	1954 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces brasiliensis JCM 3086	GCA_014647875	scaffold	GenBank ENA	1954 tax ID	*
[Ref.: #66792]	Streptomyces brasiliensis strain JCM 3086	1954.7	wgs	PATRIC	1954 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces brasiliensis JCM 3086 NCBI: GCA_014647875.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces brasiliensis JCM 3086 NCBI: GCA_014647875.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	84.415	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.953	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.148	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	90.072	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	86.5	no

Availability in culture collections External links

[Ref.: #10827]

Culture collection no.

DSM 43159, ATCC 23727, CUB 126, IFO 12596, JCM 3086, KCC A-0086, NBRC 12596, RIA 911, BCRC 16849, CBS 520.68, CGMCC 4.1486, IFM 1210, KCTC 9071, KCTC 9195, NBRC 101283, NRRL B-3327, VKM Ac-1310, VKM Ac-656

[Ref.: #84163]

SI-ID 45720

Literature:

Topic	Title	Authors	Journal	DOI	Year
Cultivation	Mycelial differentiation and spore formation by Streptomyces brasiliensis in submerged culture.	Rueda B, Miguelez EM, Hardisson C, Manzanal MB	Can J Microbiol		2001	*
Metabolism	Changes in glycogen and trehalose content of Streptomyces brasiliensis hyphae during growth in liquid cultures under sporulating and non-sporulating conditions.	Rueda B, Miguelez EM, Hardisson C, Manzanal MB	FEMS Microbiol Lett	10.1111/j.1574-6968.2001.tb09466.x	2001	*

References

#10827

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43159

#19550

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84163

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45720.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces brasiliensis JCM 3086

Streptomyces brasiliensis JCM 3086

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