Actinomyces israelii (CCUG 34702, DSM 43011, ATCC 10048)

Name: Actinomyces israelii (CCUG 34702, DSM 43011, ATCC 10048)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 150

Type strain

Culture col. no. CCUG 34702 DSM 43011 ATCC 10048 NHI 1829

NCBI tax ID(s) 1659

Special Collections DSMZ CCUG

History <- K. Schaal; <- ATCC; ATCC 10048 <- C. W. Emmons; NHI 1829 (Actinomyces bovis)

Links

Actinomyces israelii CCUG 34702 is an anaerobe, mesophilic prokaryote that was isolated from pleural fluid.

anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 35174

ATCC 10048,CCUG 34702,DSM 43011,CNCTC 7405

@ref 20215

Last LPSN update 2025-12-16 09:46:47

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Actinomyces

Species Actinomyces israelii

Full scientific name Actinomyces israelii (Kruse 1896) Lachner-Sandoval 1898 (Approved Lists 1980)

Synonyms (2)

"Actinobacterium israeli"
"Streptothrix israeli"

BacDive ID	Other strains from **Actinomyces israelii** (36)	Type strain
151	A. israelii Jr 277 (CDC W855), DSM 43320, ATCC 12102, ... (type strain)
152	A. israelii DSM 43323, WVU 339
105476	A. israelii STI09064(IMET), 1110-009,
105477	A. israelii STI09079(IMET), 1141-014,
135348	A. israelii B1, CIP 53.109
136339	A. israelii CIP 104730, CCUG 4867, NCTC 4860
137141	A. israelii 1912, CIP 60.40
137277	A. israelii CIP 104876, NCTC 10236, CCUG 34502
138098	A. israelii CIP 104874, NCTC 6826, CCUG 34495
138099	A. israelii CCUG 34501, CIP 104875, NCTC 10215
141881	A. israelii CCUG 8060
146033	A. israelii CCUG 30217
147537	A. israelii CCUG 33763
147818	A. israelii CCUG 34284, ATCC 12597
147919	A. israelii CCUG 34496, NCTC 6827
147920	A. israelii CCUG 34497, NCTC 6830
147921	A. israelii CCUG 34498, NCTC 6831
147922	A. israelii CCUG 34499, NCTC 8047
147923	A. israelii CCUG 34500, NCTC 8439
147946	A. israelii CCUG 34556
147947	A. israelii CCUG 34557
148445	A. israelii CCUG 35455
148548	A. israelii CCUG 35624
148770	A. israelii CCUG 35922
148771	A. israelii CCUG 35923
148772	A. israelii CCUG 35924
148773	A. israelii CCUG 35925
148774	A. israelii CCUG 35926
149130	A. israelii CCUG 36904
149131	A. israelii CCUG 36905
149316	A. israelii CCUG 37486 C
149320	A. israelii CCUG 37496
152583	A. israelii CCUG 47135
154406	A. israelii CCUG 53438
154704	A. israelii CCUG 54890
156688	A. israelii CCUG 64147

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99
125438		94.5
125438	positive	93.156

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10672	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
10672	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
10672	positive	growth	37	mesophilic
52262	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
10672	anaerobe
52262	anaerobe

Fatty acid profile

Metadata FA analysis

@ref

52262

Fatty acid	Percentage	ECL
C16:0	42.4	16
C18:1 ω9c	26.8	17.769
C18:2 ω6,9c/C18:0 ANTE	10.1	17.724
C18:0	8.3	18
C18:1 ω9c DMA	5.5	18.226
C14:0	2.2	14
C19:0 CYCLO ω9c	1.5	18.87
C17:1 ω9c	1.4	16.773
C16:1 ω9c	0.9	15.774
Unidentified	0.9	18.18

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Oral cavity and Airways	#Pleural fluid
#Infection	#Patient	-

Isolation

@ref	Sample type
10672	pleural fluid
52262	Human pleural fluid

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10672	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2689187v1 assembly for Actinomyces israelii ATCC 10048	contig	GCA_026891875	1659.8	1659	62.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Actinomyces israelii strain ATCC 10048 16S ribosomal RNA gene, partial sequence	AF058046	265		1659

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinomyces israelii ATCC 10048
NCBI: GCA_026891875

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	50.60	no
125439	motility	BacteriaNetⓘ	no	86.10	no
125439	gram_stain	BacteriaNetⓘ	positive	99.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	83.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinomyces israelii ATCC 10048
NCBI: GCA_026891875.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.16	no
125438	anaerobic	anaerobicⓘ	no	70.55	yes
125438	aerobic	aerobicⓘ	no	67.50	yes
125438	spore-forming	spore-formingⓘ	no	77.49	no
125438	thermophilic	thermophileⓘ	no	92.70	yes
125438	flagellated	motile2+ⓘ	no	94.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Antimicrobial Effect of Low-Fluoride Toothpastes Containing Polyphosphate and Polyols: An In Vitro Assessment of Inhibition Zones.	Zen I, Delbem ACB, Hosida TY, Sampaio C, de Morais LA, Martins TP, Monteiro DR, Pessan JP.	Antibiotics (Basel)	10.3390/antibiotics12081333	2023
	Factors Associated With MALDI-TOF Mass Spectral Quality of Species Identification in Clinical Routine Diagnostics.	Cuenod A, Foucault F, Pfluger V, Egli A.	Front Cell Infect Microbiol	10.3389/fcimb.2021.646648	2021
Enzymology	Species-specific oligonucleotide probes for five Bifidobacterium species detected in human intestinal microflora.	Yamamoto T, Morotomi M, Tanaka R.	Appl Environ Microbiol	10.1128/aem.58.12.4076-4079.1992	1992
	Coaggregation of oral Bacteroides species with other bacteria: central role in coaggregation bridges and competitions.	Kolenbrander PE, Andersen RN, Holdeman LV.	Infect Immun	10.1128/iai.48.3.741-746.1985	1985
	Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA.	Marchesi JR, Sato T, Weightman AJ, Martin TA, Fry JC, Hiom SJ, Dymock D, Wade WG.	Appl Environ Microbiol	10.1128/aem.64.2.795-799.1998	1998
Phylogeny	Are putative periodontal pathogens reliable diagnostic markers?	Riep B, Edesi-Neuss L, Claessen F, Skarabis H, Ehmke B, Flemmig TF, Bernimoulin JP, Gobel UB, Moter A.	J Clin Microbiol	10.1128/jcm.01387-08	2009
Phylogeny	Characterization of Actinomyces israelii serotypes 1 and 2.	Brock DW, Georg LK.	J Bacteriol	10.1128/jb.97.2.589-593.1969	1969
	Serological studies of actionomyces israelii by crossed immunoelectrophoresis: standard antigen-antibody system for A. israelii.	Holmberg K, Nord CE, Wadstrom T.	Infect Immun	10.1128/iai.12.2.387-397.1975	1975
	Coaggregation of human oral Cytophaga species and Actinomyces israelii.	Kolenbrander PE, Celesk RA.	Infect Immun	10.1128/iai.40.3.1178-1185.1983	1983
	Multigeneric aggregations among oral bacteria: a network of independent cell-to-cell interactions.	Kolenbrander PE, Andersen RN.	J Bacteriol	10.1128/jb.168.2.851-859.1986	1986
	Morphological, biochemical, and serological studies on 64 strains of Actinomyces israelii.	Slack JM, Landfried S, Gerencser MA.	J Bacteriol	10.1128/jb.97.2.873-884.1969	1969
Enzymology	Evaluation of the ATB 32 A system for identification of anaerobic bacteria isolated from clinical specimens.	Looney WJ, Gallusser AJ, Modde HK.	J Clin Microbiol	10.1128/jcm.28.7.1519-1524.1990	1990
	Presence of squalene in gram-positive bacteria.	Amdur BH, Szabo EI, Socransky SS.	J Bacteriol	10.1128/jb.135.1.161-163.1978	1978
Phylogeny	Determination and analysis of Actinomyces israelii serotypes by fluorescent-antibody procedures.	Brock DW, Georg LK.	J Bacteriol	10.1128/jb.97.2.581-588.1969	1969
	The use of monoclonal antibodies to detect Bacteroides gingivalis in biological samples.	Chen P, Bochacki V, Reynolds HS, Beanan J, Tatakis DN, Zambon JJ, Genco RJ.	Infect Immun	10.1128/iai.54.3.798-803.1986	1986
Phylogeny	Motile nocardoid Actinomycetales.	Sukapure RS, Lechevalier MP, Reber H, Higgins ML, Lechevalier HA, Prauser H.	Appl Microbiol	10.1128/am.19.3.527-533.1970	1970
Enzymology	Identification of Actinomyces, Arachnia, Bacterionema, Rothia, and Propionibacterium species by defined immunofluorescence.	Holmberg K, Forsum U.	Appl Microbiol	10.1128/am.25.5.834-843.1973	1973
Metabolism	Ability of oral bacteria to degrade fibronectin.	Wikstrom M, Linde A.	Infect Immun	10.1128/iai.51.2.707-711.1986	1986
Phylogeny	Characteristics of CDC group 1 and group 1-like coryneform bacteria isolated from clinical specimens.	Funke G, Lucchini GM, Pfyffer GE, Marchiani M, von Graevenitz A.	J Clin Microbiol	10.1128/jcm.31.11.2907-2912.1993	1993
	SEROLOGICAL GROUPING OF ACTINOMYCES BY MEANS OF FLUORESCENT ANTIBODIES.	Slack JM, Winger A, Moore DW.	J Bacteriol	10.1128/jb.82.1.54-65.1961	1961
	Epicillin: in vitro laboratory studies.	Basch H, Erickson R, Gadebusch H.	Infect Immun	10.1128/iai.4.1.44-49.1971	1971
	Conservation of an Actinomyces viscosus T14V type 1 fimbrial subunit homolog among divergent groups of Actinomyces spp.	Yeung MK.	Infect Immun	10.1128/iai.60.3.1047-1054.1992	1992
Phylogeny	IDENTIFICATION OF SPECIES OF ACTINOMYCES.	GEORG LK, ROBERTSTAD GW, BRINKMAN SA.	J Bacteriol	10.1128/jb.88.2.477-490.1964	1964
	Characterization of coaggregation between Bacteroides gingivalis T22 and Fusobacterium nucleatum T18.	Kinder SA, Holt SC.	Infect Immun	10.1128/iai.57.11.3425-3433.1989	1989
	Mannose-contaminating agglutinin for Actinomyces viscosus and Actinomyces naeslundii.	Ellen RP, Leung WL, Fillery ED, Grove DA.	Infect Immun	10.1128/iai.26.2.427-434.1979	1979
	Experimental actinomycosis in mice induced by alginate gel particles containing Actinomyces israelii.	Sumita M, Hoshino E, Iwaku M	Endod Dent Traumatol	10.1111/j.1600-9657.1998.tb00827.x	1998
Pathogenicity	Antibacterial action of dental cements: an in vitro study.	Morrier JJ, Rocca JP, Barsotti O	Bull Group Int Rech Sci Stomatol Odontol		1995

References

#10672	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43011
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#52262	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 34702
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinomyces israelii (CCUG 34702, DSM 43011, ATCC 10048)

Name and taxonomic classification