Name: Streptomyces albus DSM 40447
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14969

Type strain:

Species: Streptomyces albus

Culture col. no.: DSM 40447, ATCC 25427, ATCC 618, CBS 925.69, IFO 13015, ISP 5447, KCC S-0451, NBRC 13015, NRRL B-1685, RIA 1207, JCM 4451, BCRC 12098, CGMCC 4.1685, HAMBI 50, HUT 6614, IMET 43380, KCTC 9672

Strain history: KCC S-0451 <-- IFO 13015 <-- SAJ <-- ISP 5447 <-- ATCC 618 <-- S. A. Waksman <-- A. J. Kluyver <-- A. Krainsky.

NCBI tax ID(s): 1888 (species), 67257 (subspecies)

SI-ID 92770

ATCC 618, ATCC 25427, IFO 3418, IFO 13015, DSM 40447, JCM 4451, CCRC 12098, HUT 6614, IMET 43380, NRRL B-1685, CBS 925.69, CBS 116.18, KCTC 9672, KCTC 9751, AS 4.1685, NBRC 13015, NBRC 3418, BCRC 12098, HAMBI 50, CGMCC 4.1685

Special Collections

Other strains from Streptomyces albus

Section

Streptomyces albus DSM 40447 is a spore-forming, Gram-positive bacterium that builds an aerial mycelium and was isolated from soil.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces albus**
	Full Scientific Name (LPSN)	Streptomyces albus (Rossi Doria 1891) Waksman and Henrici 1943 (Approved Lists 1980)

	Synonym	Streptomyces flocculus
	Synonym	Streptomyces rangoon
	Synonym	"Actinomyces* gibsonii"*
	Synonym	"Streptotrix* alba"*
	Synonym	Streptomyces gibsonii
	Synonym	"Actinomyces* flocculus"*
	Synonym	Streptomyces almquistii
	Synonym	"Actinomyces* rangoon"*
	Synonym	"Actinomyces* almquisti"*
	Synonym	Streptomyces rangoonensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %91.985

[Ref.: #19455]	Colony color	Honey yellow
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 2

[Ref.: #19455]	Colony color	Honey yellow
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 3

[Ref.: #19455]	Colony color	Brown beige
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 4

[Ref.: #19455]	Colony color	Brown beige
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 5

[Ref.: #19455]	Colony color	Brown beige
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 6

[Ref.: #19455]	Colony color	Brown beige
[Ref.: #19455]	Incubation period	10-14 days
[Ref.: #19455]	Cultivation medium used	ISP 7

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 2

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 3

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 4

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 5

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 6

[Ref.: #19455]	Multicellular complex forming ability	yes
[Ref.: #19455]	Multicellular complex name	Aerial Mycelium
[Ref.: #19455]	Multicellular complex color	Cream
[Ref.: #19455]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9550]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9550]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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[Ref.: #19455]

Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

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[Ref.: #19455]

Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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		Temperature
[Ref.: #9550]	growth	28 °C
[Ref.: #19455]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %92.095

[Ref.: #20216]

Name of produced compound

Hydantionase

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19455]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19455]	cellulose ChEBI	+
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #19455]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19455]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #19455]	mannitol ChEBI	+
[Ref.: #19455]	myo-inositol ChEBI	+
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19455]	raffinose ChEBI	+
[Ref.: #19455]	rhamnose ChEBI	+
[Ref.: #19455]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19455]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19455]	316	+	+	+	+	+	-	+	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19455]	364	not determinedn.d.	+	+	+	+	+	+	+	-	+	+	+	-	+	-	+	+	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9550]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB184771 (>99% sequence identity) for Streptomyces albus subclade from Microbeatlas

Aquatic Samples	8
Soil Samples	170
Animal Samples	22
Plant Samples	4
Total Samples	204

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9550]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19455]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9550]	Streptomyces albus subsp. albus gene for 16S rRNA, partial sequence, strain: NBRC 3418	AB184771	1482	GenBank ENA	67257 tax ID
[Ref.: #20218]	Streptomyces almquistii gene for 16S rRNA, partial sequence, strain: NBRC 13015	AB184258	1471	GenBank ENA	67270 tax ID	*
[Ref.: #124043]	Streptomyces almquistii gene for 16S ribosomal RNA, partial sequence, strain: JCM 4451.	D44148	121	GenBank ENA	1888 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces albus NRRL B-1685	GCA_001418125	scaffold	GenBank ENA	1888 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces albus NRRL B-1685 NCBI: GCA_001418125.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.985	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.982	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.286	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.095	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.007	no

Availability in culture collections External links

[Ref.: #9550]

Culture collection no.

DSM 40447, ATCC 25427, ATCC 618, CBS 925.69, IFO 13015, ISP 5447, KCC S-0451, NBRC 13015, NRRL B-1685, RIA 1207, JCM 4451, BCRC 12098, CGMCC 4.1685, HAMBI 50, HUT 6614, IMET 43380, KCTC 9672

[Ref.: #84078]

SI-ID 92770

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Taxonomic evaluation of Streptomyces albus and related species using multilocus sequence analysis and proposals to emend the description of Streptomyces albus and describe Streptomyces pathocidini sp. nov.	Labeda DP, Doroghazi JR, Ju KS, Metcalf WW	Int J Syst Evol Microbiol	10.1099/ijs.0.058107-0	2013	*
Phylogeny	Streptomyces panacagri sp. nov., isolated from soil of a ginseng field.	Cui Y, Baek SH, Wang L, Lee HG, Cui C, Lee ST, Im WT	Int J Syst Evol Microbiol	10.1099/ijs.0.029942-0	2011	*

References

#9550

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40447

#19455

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84078

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92770.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Streptomyces albus NRRL B-1685

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