Name: Actinomyces naeslundii CCUG 37599
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 149367

Type strain:

Species: Actinomyces naeslundii

Culture col. no.: CCUG 37599

NCBI tax ID(s): 1655 (species)

SI-ID 51321

CCUG 37599

Special Collections

CCUG

Other strains from Actinomyces naeslundii

Section

Actinomyces naeslundii CCUG 37599 is a Gram-positive bacterium that was isolated from Human cerebrospinal fluid,newborn.

Gram-positive
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Actinomycetales*
	Family	*Actinomycetaceae*
	Genus	*Actinomyces*
	Species	**Actinomyces naeslundii**
	Full Scientific Name (LPSN)	Actinomyces naeslundii corrig. Thompson and Lovestedt 1951 (Approved Lists 1980)

Synonym

Actinomyces naeslundi

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %91.76

[Ref.: #69480]	Motility	no Confidence in %92.875

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #53756]	Sample type/isolated from	Human cerebrospinal fluid,newborn
[Ref.: #53756]	Sampling date	1997-02-26
[Ref.: #53756]	Geographic location (country and/or sea, region)	Uppsala
[Ref.: #53756]	Country	Sweden
[Ref.: #53756]	Country ISO 3 Code	SWE
[Ref.: #53756]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	#Child
#Host Body Product	#Fluids	#Cerebrospinal fluid
#Infection	#Patient	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776381	1384	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776382	1386	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776383	1372	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776384	1384	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776385	1383	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776386	1371	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776387	1382	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776388	1384	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776389	1384	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776390	1383	GenBank ENA	1655 tax ID	*
[Ref.: #124043]	Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.	JF776391	1383	GenBank ENA	1655 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinomyces naeslundii CCUG 37599	GCA_001956445	scaffold	GenBank ENA	1655 tax ID	*
[Ref.: #66792]	Actinomyces naeslundii strain CCUG 37599	1655.41	wgs	PATRIC	1655 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinomyces naeslundii strain CCUG 37599 PATRIC: 1655.41
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	77	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinomyces naeslundii CCUG 37599 NCBI: GCA_001956445.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.76	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	75.095	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	77.893	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	81.112	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.528	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.875	no

Availability in culture collections External links

[Ref.: #53756]

Culture collection no.

CCUG 37599

[Ref.: #103788]

SI-ID 51321

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#53756 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 37599

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#103788

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID51321.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Actinomyces naeslundii strain CCUG 37599

Actinomyces naeslundii CCUG 37599

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