Name: Kitasatospora azatica DSM 41650
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14851

Type strain:

Species: Kitasatospora azatica

Culture col. no.: DSM 41650, ATCC 51237, IFO 13803, NBRC 13803, JCM 8798, ATCC 29755, CGMCC 4.1663, IAM 15163, KACC 20223, KCTC 9699, MTCC 703

Strain history: IFO 13803 <-- J. Awaya OS-3256.

NCBI tax ID(s): 1449346 (strain), 58347 (species)

SI-ID 39697

ATCC 29755, ATCC 51237, IFO 13803, DSM 41650, JCM 8798, KCTC 9699, AS 4.1663, NBRC 13803, NRRL B-24283, KACC 20223, IAM 15163, CGMCC 4.1663

Special Collections

Other strains from Kitasatospora azatica

Section

Kitasatospora azatica DSM 41650 is a spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Kitasatospora*
	Species	**Kitasatospora azatica**
	Full Scientific Name (LPSN)	Kitasatospora azatica corrig. (Nakagaito et al. 1993) Zhang et al. 1997

	Synonym	Kitasatosporia azatica
	Synonym	Streptomyces azaticus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Motility	no Confidence in %91.6

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10427]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #10427]

Culture medium growth

[Ref.: #10427]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10427]

Culture medium composition

expand / minimize

[Ref.: #10427]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10427]

Culture medium growth

[Ref.: #10427]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10427]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10427]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %100

[Ref.: #10427]	Name of produced compound	alazopeptin
[Ref.: #20216]	Name of produced compound	Alazopeptin

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₈)

	Metabolite production	Metabolite	Production
[Ref.: #67770]		alazopeptin	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10427]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	suburbs of Tokyo
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U93312 (>99% sequence identity) for Kitasatospora from Microbeatlas

Aquatic Samples	19
Soil Samples	1166
Animal Samples	107
Plant Samples	99
Total Samples	1391

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10427]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Kitasatosporia azaticus strain IFO13803 16S ribosomal RNA gene, partial sequence	U93312	1481	GenBank ENA	58347 tax ID	*
[Ref.: #20218]	Kitasatosporia azaticus strain IFO13803 16S-23S rRNA gene spacer, partial sequence	U93313	278	GenBank ENA	58347 tax ID	*
[Ref.: #20218]	Kitasatospora azatica gene for 16S rRNA, partial sequence, strain: NBRC 13803	AB184494	1473	GenBank ENA	58347 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Kitasatospora azatica KCTC 9699	GCA_000744785	contig	GenBank ENA	1449346 tax ID
[Ref.: #66792]	Kitasatospora azatica KCTC 9699	1449346.3	wgs	PATRIC	1449346 tax ID	*
[Ref.: #66792]	Kitasatospora azatica KCTC 9699	2574179793	draft	JGI IMG/M	1449346 tax ID	*

[Ref.: #67770]	GC-content	71.6 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	70.5 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Kitasatospora azatica KCTC 9699 PATRIC: 1449346.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Kitasatospora azatica KCTC 9699 PATRIC: 1449346.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.15	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.753	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	87.785	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	85.804	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	91.6	no

Availability in culture collections External links

[Ref.: #10427]

Culture collection no.

DSM 41650, ATCC 51237, IFO 13803, NBRC 13803, JCM 8798, ATCC 29755, CGMCC 4.1663, IAM 15163, KACC 20223, KCTC 9699, MTCC 703

[Ref.: #83964]

SI-ID 39697

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kitasatospora acidiphila sp. nov., isolated from pine grove soil, exhibiting antimicrobial potential.	Kim MJ, Roh SG, Kim MK, Park C, Kim S, Kim SB	Int J Syst Evol Microbiol	10.1099/ijsem.0.004450	2020	*

References

#10427

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41650

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83964

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39697.1 )

* These data were automatically processed and therefore are not curated

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Kitasatospora azatica KCTC 9699

Kitasatospora azatica KCTC 9699

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