Kitasatospora azatica (DSM 41650, ATCC 51237, IFO 13803)

Name: Kitasatospora azatica (DSM 41650, ATCC 51237, IFO 13803)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14851

Type strain

Culture col. no. DSM 41650 ATCC 51237 IFO 13803 NBRC 13803 JCM 8798 9 more

NCBI tax ID(s) 1449346 58347

Special Collections DSMZ JCM KCTC JMRC

History DSMZ <- IFO <- Kitosato Inst. (J. Awaya OS-3256) JCM <-- IFO 13803 <-- J. Awaya OS-3256.

Links

Kitasatospora azatica DSM 41650 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 39697

ATCC 29755,ATCC 51237,IFO 13803,DSM 41650,JCM 8798,KCTC 9699,AS 4.1663,NBRC 13803,NRRL B-24283,KACC 20223,IAM 15163,CGMCC 4.1663

@ref 20215

Last LPSN update 2026-05-29 08:28:23

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Kitasatospora

Species Kitasatospora azatica

Full scientific name Kitasatospora azatica corrig. (Nakagaito et al. 1993) Zhang et al. 1997

Synonyms (2)

Kitasatosporia azatica
Streptomyces azaticus

BacDive ID	Other strains from **Kitasatospora azatica** (2)	Type strain
128544	K. azatica SF001593,
128545	K. azatica SF002407,

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	96.167
125439	99.835	positive
125438	91.6

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10427	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10427	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10427	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.524

Spore formation

@ref	Spore formation	Confidence
125439		96.089

Compound production

@ref	Compound
10427	alazopeptin
20216	Alazopeptin

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈)

Metabolite production

@ref	Metabolite	Production
67770	alazopeptin

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
10427	soil
67770	Soil	suburbs of Tokyo	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence U93312 (>99% sequence identity) for Kitasatospora from Microbeatlas

Aquatic Samples	19
Soil Samples	1166
Animal Samples	107
Plant Samples	99
Total Samples	1391

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10427	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM74478v1 assembly for Kitasatospora azatica KCTC 9699	contig	GCA_000744785	1449346.3	2574179793	1449346	76.96

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Kitasatosporia azaticus strain IFO13803 16S ribosomal RNA gene, partial sequence	U93312	1481	58347
20218	Kitasatosporia azaticus strain IFO13803 16S-23S rRNA gene spacer, partial sequence	U93313	278	58347
20218	Kitasatospora azatica gene for 16S rRNA, partial sequence, strain: NBRC 13803	AB184494	1473	58347

GC content

@ref	GC-content (mol%)	Method
67770	71.6	genome sequence analysis
67770	70.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM74478v1 assembly for Kitasatospora azatica KCTC 9699
BV-BRC: 1449346.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.52	no
125439	gram_stain	BacteriaNetⓘ	positive	99.84	no
125439	spore_formation	BacteriaNetⓘ	yes	96.09	no
125439	motility	BacteriaNetⓘ	no	96.17	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Kitasatospora azatica KCTC 9699
PATRIC: 1449346.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.15	no
125438	anaerobic	anaerobicⓘ	no	95.75	no
125438	spore-forming	spore-formingⓘ	yes	87.79	no
125438	aerobic	aerobicⓘ	yes	85.80	no
125438	thermophilic	thermophileⓘ	no	97.00	yes
125438	flagellated	motile2+ⓘ	no	91.60	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Characterization of the biosynthetic gene cluster for cryptic phthoxazolin A in Streptomyces avermitilis.	Suroto DA, Kitani S, Arai M, Ikeda H, Nihira T.	PLoS One	10.1371/journal.pone.0190973	2018
Phylogeny	Kitasatospora acidiphila sp. nov., isolated from pine grove soil, exhibiting antimicrobial potential.	Kim MJ, Roh SG, Kim MK, Park C, Kim S, Kim SB	Int J Syst Evol Microbiol	10.1099/ijsem.0.004450	2020

References

#10427	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41650
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Kitasatospora azatica (DSM 41650, ATCC 51237, IFO 13803)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Observation

Metabolite production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000744785

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media