Streptococcus equinus (DSM 20480, ATCC 33317, NCDO 597)

Name: Streptococcus equinus (DSM 20480, ATCC 33317, NCDO 597)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14719

Type strain

Strain Designation Pearl 11

Culture col. no. DSM 20480 ATCC 33317 NCDO 597 NCTC 8177 WDCM 00133 12 more

NCBI tax ID(s) 1210006 1335

Special Collections DSMZ CCUG JCM CIP

Links

Streptococcus equinus Pearl 11 is a microaerophile, mesophilic, Gram-positive human pathogen that was isolated from cow dung.

Gram-positive coccus-shaped microaerophile mesophilic human pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92503

LMG 16884,ACM 3539,ATCC 33317,CCUG 34832,CIP 102302,DSM 20480,JCM 5802,JCM 7877,LMG 8518,NCFB 597,NCTC 8177,NCDO 597,CCUG 17828,NCTC 8777,NCIMB 700597,CECT 213,CCRC 14729,CECT 974,BCRC 14729,HAMBI 1527,KCTC 3959,CNCTC 6732,CGMCC 1.2502,CECT 966

@ref 20215

Last LPSN update 2025-12-16 09:50:25

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus equinus

Full scientific name Streptococcus equinus Andrewes and Horder 1906 (Approved Lists 1980)

Synonyms (1)

Streptococcus bovis

BacDive ID	Other strains from **Streptococcus equinus** (13)	Type strain
14727	S. equinus Hl2B, H12B, DSM 20558, ATCC 9812, NCDO 1037, ... (type strain)
14726	S. equinus 1, DSM 20062
136189	S. equinus CIP 103245, NCDO 2127, JCM 7883
137757	S. equinus TR5, CIP 82.5, NCDO 2491, NCTC 10386, CCUG ...
142327	S. equinus CCUG 11666, NCTC 10389
142642	S. equinus CCUG 13552
146697	S. equinus CCUG 31964
147224	S. equinus CCUG 33096
148113	S. equinus CCUG 34833, NCTC 8140, JCM 7878, ACM 3540, ...
149581	S. equinus CCUG 38009
150627	S. equinus CCUG 41793
152833	S. equinus CCUG 47736
165639	S. equinus JCM 7882, NCDO 2446, NCIMB 702128

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
119123	positive	coccus-shaped
125438	positive

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
8849	alpha	1	1-2 days
119123

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8849	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8849	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
38102	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
119123	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8849	positive	growth	37	mesophilic
38102	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic
119123	positive	growth	25-45
119123	negative	growth	10

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
8849	microaerophile
119123	facultative anaerobe
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119123	NaCl		growth	6.5 %

Murein

@ref	Murein short key	Type
8849	A11.29	A3alpha L-Lys-L-Thr-L-Ser(L-Ala)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
119123	4853 ChEBI	esculin	+	hydrolysis
68381	28087 ChEBI	glycogen	+	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
119123	606565 ChEBI	hippurate	-	hydrolysis
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	+	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
119123	17632 ChEBI	nitrate	-	reduction
119123	17632 ChEBI	nitrate	+	respiration
119123	16301 ChEBI	nitrite	-	reduction
68381	16634 ChEBI	raffinose	+	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
119123	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	+	from API rID32STR
119123	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
119123	alcohol dehydrogenase	-	1.1.1.1
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68382	beta-galactosidase	-	3.2.1.23	from API zym
119123	beta-galactosidase	+	3.2.1.23
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68382	beta-glucosidase	+	3.2.1.21	from API zym
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68382	beta-glucuronidase	-	3.2.1.31	from API zym
8849	catalase	-	1.11.1.6
119123	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
8849	cytochrome-c oxidase	-	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119123	gamma-glutamyltransferase	-	2.3.2.2
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119123	lysine decarboxylase	-	4.1.1.18
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
119123	ornithine decarboxylase	-	4.1.1.17
119123	oxidase	-
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68382	trypsin	-	3.4.21.4	from API zym
68381	urease	-	3.5.1.5	from API rID32STR
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119123	-	-	+	+	-	+	-	-	-	-	+	-	+	-	-	+	+	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
8849	-	+	-	-	+	-	-	-	-	+	-	+	+	-	-	-	+	+	-	-	-	-	-	+	+	+	+	-	+	-	+	-
8849	-	+	-	-	+	-	-	-	-	+	-	+	+	-	-	-	+	+	-	-	-	+	-	+	+	+	+	-	+	-	-	-
8849	-	+	-	-	+	-	-	-	-	+	-	+	+	-	-	-	+	+	-	-	-	+	-	+	+	+	+	-	+	-	-	-
8849	-	+	-	-	+	-	+/-	-	-	+	-	+	+	-	-	-	+	+	-	-	-	-	-	+	-	+	+	-	+	-	+/-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type
8849	cow dung
67770	Cow feces
119123	Animal, Cow, dung

Taxonmaps

69479

Global distribution of 16S sequence LC145574 (>99% sequence identity) for Streptococcus from Microbeatlas

Aquatic Samples	1799
Soil Samples	419
Animal Samples	33925
Plant Samples	666
Total Samples	36809

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
8849			2	Risk group (German classification) According to TRBA 466
119123			2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM74719v1 assembly for Streptococcus equinus ATCC 33317	contig	GCA_000747195	1210006.5	2600255054	1210006	75.25

Genome browser: GCA_000747195

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptococcus bovis strain ATCC 33317 16S-23S ribosomal RNA intergenic spacer, complete sequence	AY347544	271	1210006
20218	Streptococcus bovis 16S ribosomal RNA	M58835	1551	1335
20218	S.bovis 16S rRNA	X58317	1334	1335
8849	Streptococcus bovis DNA for 16S rRNA, strain ATCC 33317, NCDO 597	AB002482	1457	1210006
67770	Streptococcus equinus gene for 16S ribosomal RNA, partial sequence, strain: JCM 5802	LC145574	1501	1335
124043	Streptococcus equinus ATCC 33317 16S ribosomal RNA gene, partial sequence.	OR501329	1552	1210006
124043	Streptococcus equinus strain CECT 213 16S ribosomal RNA gene, partial sequence.	KP001338	689	1335
124043	Streptococcus equinus strain CECT 974 16S ribosomal RNA gene, partial sequence.	KP001339	689	1335

GC content

@ref	GC-content (mol%)
8849	37.7
67770	37.6
67770	37.7

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus equinus ATCC 33317
NCBI: GCA_000747195

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.00	no
125439	motility	BacteriaNetⓘ	no	62.40	no
125439	gram_stain	BacteriaNetⓘ	negative	71.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus equinus ATCC 33317
PATRIC: 1210006.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.01	no
125438	anaerobic	anaerobicⓘ	no	83.79	yes
125438	spore-forming	spore-formingⓘ	no	84.74	no
125438	aerobic	aerobicⓘ	no	95.33	yes
125438	thermophilic	thermophileⓘ	no	98.50	yes
125438	flagellated	motile2+ⓘ	no	86.50	no

Literature

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References

#8849	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20480
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38102	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119123	Collection of Institut Pasteur ; Curators of the CIP; CIP 102302
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus equinus (DSM 20480, ATCC 33317, NCDO 597)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Murein

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000747195

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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