Streptococcus canis (DSM 20715, ATCC 43496, CCUG 27661)

Name: Streptococcus canis (DSM 20715, ATCC 43496, CCUG 27661)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14720

Type strain

Strain Designation STR-T1

Culture col. no. DSM 20715 ATCC 43496 CCUG 27661 CIP 103223 CNCTC 18/89 2 more

NCBI tax ID(s) 1329

Special Collections DSMZ CCUG CIP

History <- R. Kilpper-Bälz <- J. Hommez, STR-T1 CIP <- 1988, DSM <- R. Kilpper-Bältz <- J. Hommez: strain STR-T1

Links

Streptococcus canis STR-T1 is a microaerophile, Gram-positive, coccus-shaped bacterium that was isolated from bovine mastitis.

Gram-positive coccus-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 9406

LMG 15890,ATCC 43496,CCUG 27661,CIP 103223,DSM 20715,NCTC 12191,BCRC 14753,CCRC 14753,CNCTC 6690

@ref 20215

Last LPSN update 2026-02-09 11:21:29

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus canis

Full scientific name Streptococcus canis Devriese et al. 1986

BacDive ID	Other strains from **Streptococcus canis** (13)	Type strain
14721	S. canis STR-290, CCUG 27660, LMG 14833, DSM 20716, ...
137432	S. canis SVA M1794/90, CIP 105347, CCUG 27494
138148	S. canis CIP 105029, CCUG 27492, CG 929/90
145032	S. canis CCUG 27481
145035	S. canis CCUG 27484
145037	S. canis CCUG 27493, CG 938/90, CIP 105030
145038	S. canis CCUG 27495
145039	S. canis CCUG 27496
145106	S. canis CCUG 27667
145107	S. canis CCUG 27668
149239	S. canis CCUG 37321
149321	S. canis CCUG 37497
174656	S. canis ES2783_or, DSM 114948

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
117144	positive	coccus-shaped
125438			91
125439			94

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
9025	beta	1	1-2 days
117144		1
68370	beta	1		from API 20STR

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
9025	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
9025	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
40573	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
117144	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
9025	positive	growth	37
40573	positive	growth	37
48878	positive	growth	37
117144	positive	growth	25-41
117144	negative	growth	10
117144	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
9025	microaerophile
117144	facultative anaerobe
125439	microaerophile	98.1

Spore formation

@ref	Spore formation	Confidence
125439		99.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
117144	NaCl		growth	6.5 %

Murein

@ref	Murein short key	Type
9025	A11.24	A3alpha L-Lys-L-Thr-Gly

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68370	29016 ChEBI	arginine	+	hydrolysis	from API 20STR
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68370	16899 ChEBI	D-mannitol	-	builds acid from	from API 20STR
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68381	16988 ChEBI	D-ribose	+	builds acid from	from API rID32STR
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68370	16988 ChEBI	D-ribose	+	builds acid from	from API 20STR
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68370	17924 ChEBI	D-sorbitol	-	builds acid from	from API 20STR
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
117144	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68370	4853 ChEBI	esculin	-	hydrolysis	from API 20STR
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68370	28087 ChEBI	glycogen	-	builds acid from	from API 20STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
117144	606565 ChEBI	hippurate	+	hydrolysis
68370	606565 ChEBI	hippurate	+	hydrolysis	from API 20STR
68370	15443 ChEBI	inulin	-	builds acid from	from API 20STR
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68370	30849 ChEBI	L-arabinose	-	builds acid from	from API 20STR
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68370	17716 ChEBI	lactose	+	builds acid from	from API 20STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
117144	17632 ChEBI	nitrate	-	reduction
117144	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68370	16634 ChEBI	raffinose	-	builds acid from	from API 20STR
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68370	28017 ChEBI	starch	+	builds acid from	from API 20STR
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68370	27082 ChEBI	trehalose	-	builds acid from	from API 20STR
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68370	15688 ChEBI	acetoin		from API 20STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR
68370	15688 ChEBI	acetoin	-	from API 20STR
117144	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
117144	alcohol dehydrogenase	-	1.1.1.1
68381	alkaline phosphatase	+	3.1.3.1	from API rID32STR
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68370	alkaline phosphatase	+	3.1.3.1	from API 20STR
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68370	arginine dihydrolase	+	3.5.3.6	from API 20STR
68382	beta-galactosidase	-	3.2.1.23	from API zym
117144	beta-galactosidase	+	3.2.1.23
68370	beta-galactosidase	+	3.2.1.23	from API 20STR
68382	beta-glucosidase	-	3.2.1.21	from API zym
68370	beta-glucosidase	-	3.2.1.21	from API 20STR
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68370	beta-glucuronidase	-	3.2.1.31	from API 20STR
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
9025	catalase	+	1.11.1.6
117144	catalase	-	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
9025	cytochrome-c oxidase	-	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
117144	gamma-glutamyltransferase	-	2.3.2.2
68382	leucine arylamidase	+	3.4.11.1	from API zym
68370	leucine arylamidase	+	3.4.11.1	from API 20STR
68382	lipase (C 14)	-		from API zym
117144	lysine decarboxylase	-	4.1.1.18
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
117144	ornithine decarboxylase	-	4.1.1.17
117144	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68381	urease	-	3.5.1.5	from API rID32STR
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
117144	-	+	+	+	-	+	+	+	-	-	+	+	-	-	-	+	-	-	-	-

API 20STR

@ref	Acetoin production (Voges Proskauer test)VP	HIP	ESC	PYRA	alpha GAL	beta GUR	beta GAL	PAL	LAP	ADH	RIB	ARA	MAN	SOR	LAC	TRE	INU	RAF	AMD	GLYG	beta hemolysis presentbeta HEM
9025	-	+	-	+/-	+/-	-	+	+	+	+	+	-	-	-	+	-	-	-	+	-	+

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
117144	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
9025	+	+	+	-	+	+	+	-	-	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	+	+	-	-	+	-	-	-
9025	+	+	+	-	+	+	+	-	-	+	-	-	+	-	-	-	-	+	+	+/-	-	+	-	-	+	+	+/-	-	+	+	-	-
9025	+	-	+	-	+	+	+	-	-	+	-	-	+	-	-	-	-	+	+/-	-	-	-	-	-	+	+	-	-	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
117144	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Infection	#Disease	-
#Infection	#Inflammation	-
#Host Body-Site	#Organ	#Mammary gland

Isolation

@ref	Sample type	Sampling date	Country	Country ISO 3 Code	Continent
9025	bovine mastitis
48878	Bovine mastitis	1982	Belgium	BEL	Europe
117144	Animal, Bovine milk, mastitis

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9025	2	Risk group (German classification) According to TRBA 466
117144	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	42912_C01 assembly for Streptococcus canis NCTC12191	complete	GCA_900636575	1329.38	8117474635	1329	99.28
66792	ASM26830v2 assembly for Streptococcus canis FSL Z3-227	contig	GCA_000268305	482234.3	2528311138	482234	78.56

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptococcus canis strain ATCC 43496 16S ribosomal RNA gene, partial sequence	DQ303184	1462	1329
9025	Streptococcus canis DNA for 16S rRNA, strain ATCC 43498, DSM 20715	AB002483	1499	1329
9025	Streptococcus canis partial 16S rRNA gene, strain NCTC12191	AJ413203	1472	1329
124043	Streptococcus canis ATCC 43496 gene for 16S rRNA, partial sequence.	LC752414	588	1329
124043	Streptococcus canis strain DSM 20715 16S ribosomal RNA gene, partial sequence.	KP001332	689	1329
124043	Streptococcus canis strain ATCC 43496 16S ribosomal RNA gene, partial sequence.	KP851852	1537	1329

GC content

9025

GC-content (mol%)39.5

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus canis strain NCTC12191
PATRIC: 1329.38

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.70	no
125439	motility	BacteriaNetⓘ	no	94.00	no
125439	gram_stain	BacteriaNetⓘ	positive	86.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	98.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus canis NCTC12191
NCBI: GCA_900636575.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.46	no
125438	anaerobic	anaerobicⓘ	no	92.12	yes
125438	aerobic	aerobicⓘ	no	96.68	yes
125438	spore-forming	spore-formingⓘ	no	87.18	no
125438	thermophilic	thermophileⓘ	no	98.50	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Antibiotic-resistant status and pathogenic clonal complex of canine Streptococcus canis-associated deep pyoderma.	Imanishi I, Iyori K, Take A, Asahina R, Tsunoi M, Hirano R, Uchiyama J, Toyoda Y, Sakaguchi Y, Hayashi S.	BMC Vet Res	10.1186/s12917-022-03482-3	2022
Phylogeny	Multilocus sequence analysis of Streptococcus canis confirms the zoonotic origin of human infections and reveals genetic exchange with Streptococcus dysgalactiae subsp. equisimilis.	Pinho MD, Matos SC, Pomba C, Lubke-Becker A, Wieler LH, Preziuso S, Melo-Cristino J, Ramirez M.	J Clin Microbiol	10.1128/jcm.02912-12	2013
	Septicemia caused by Streptococcus canis in a human.	Bert F, Lambert-Zechovsky N.	J Clin Microbiol	10.1128/jcm.35.3.777-779.1997	1997
Phylogeny	Description and evaluation of the semiautomated 4-hour rapid ID 32 Strep method for identification of streptococci and members of related genera.	Freney J, Bland S, Etienne J, Desmonceaux M, Boeufgras JM, Fleurette J.	J Clin Microbiol	10.1128/jcm.30.10.2657-2661.1992	1992
	Human case of bacteremia caused by Streptococcus canis sequence type 9 harboring the scm gene.	Taniyama D, Abe Y, Sakai T, Kikuchi T, Takahashi T.	IDCases	10.1016/j.idcr.2017.01.002	2017
	Clinical Laboratory Perspective on Streptococcus halichoeri, an Unusual Nonhemolytic, Lancefield Group B Streptococcus Causing Human Infections.	Shakir SM, Gill R, Salberg J, Slechta ES, Feldman M, Fritsche T, Clarridge J, Sharp SE, Fisher MA.	Emerg Infect Dis	10.3201/eid2705.203428	2021
	Seven draft genome sequences of Streptococcus canis strains, revealing reduced penicillin-G susceptibility.	Kawara Y, Goto M, Maeda T, Yoshida H, Tsuyuki Y, Takahashi T.	Microbiol Resour Announc	10.1128/mra.00219-24	2024
Transcriptome	Streptococcus canis transcriptomic modifications in host cell entry environments of human keratinocytes.	Yoshida H, Goto M, Tsuyuki Y, Kim JS, Takahashi T.	BMC Genomics	10.1186/s12864-024-10974-z	2024
Genetics	Draft Genome Sequence of Blood-Origin Streptococcus canis Strain FU149, Isolated from a Dog with Necrotizing Soft Tissue Infection.	Fukushima Y, Murata Y, Katayama Y, Tsuyuki Y, Yoshida H, Mizutani T, Takahashi T	Microbiol Resour Announc	10.1128/MRA.00737-20	2020
Phylogeny	Phenotypic, Genotypic, and Antimicrobial Characteristics of Streptococcus halichoeri Isolates from Humans, Proposal To Rename Streptococcus halichoeri as Streptococcus halichoeri subsp. halichoeri, and Description of Streptococcus halichoeri subsp. hominis subsp. nov., a Bacterium Associated with Human Clinical Infections.	Shewmaker PL, Whitney AM, Humrighouse BW.	J Clin Microbiol	10.1128/jcm.03214-15	2016

References

#9025	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20715
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40573	; Curators of the CIP;
#48878	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 27661
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68370	Automatically annotated from API 20STR .
#68371	Automatically annotated from API 50CH acid .
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#117144	Collection of Institut Pasteur ; Curators of the CIP; CIP 103223
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus canis (DSM 20715, ATCC 43496, CCUG 27661)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Murein

Metabolite utilization

Metabolite production

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Enzymes

API zym

API 20STR

API 50CHac

API rID32STR

API biotype100

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Genome browser: GCA_900636575

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