Streptococcus equinus Hl2B is a microaerophile, mesophilic, Gram-positive human pathogen that was isolated from Horse feces.
Gram-positive coccus-shaped microaerophile mesophilic human pathogen genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Streptococcaceae |
| Genus Streptococcus |
| Species Streptococcus equinus |
| Full scientific name Streptococcus equinus Andrewes and Horder 1906 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8908 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8908 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 40428 | MEDIUM 29- Brain heart agar | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | |||
| 119122 | CIP Medium 29 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.1 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8908 | A11.29 | A3alpha L-Lys-L-Thr-L-Ser(L-Ala) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 119122 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 119122 | 17632 ChEBI | nitrate | - | reduction | |
| 119122 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | from API rID32STR | |
| 119122 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 119122 | beta-galactosidase | + | 3.2.1.23 | |
| 68381 | beta-glucosidase | + | 3.2.1.21 | from API rID32STR |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 119122 | catalase | - | 1.11.1.6 | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 119122 | lysine decarboxylase | - | 4.1.1.18 | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 119122 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119122 | oxidase | - | ||
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 119122 | urease | - | 3.5.1.5 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119122 | not determinedn.d. | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | - | - | + | + | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8908 | - | + | - | - | - | - | - | - | - | - | + | - | + | - | - | - | + | + | - | - | - | - | - | - | - | + | - | - | - | - | - | - | |
| 8908 | - | + | - | - | - | - | - | - | - | - | + | - | + | - | - | - | + | + | - | - | - | - | - | - | - | + | - | - | + | - | - | - |
| 67770 | Sample typeHorse feces |
Global distribution of 16S sequence LC096208 (>99% sequence identity) for Streptococcus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 42197_F02 assembly for Streptococcus equinus NCTC12969 | contig | 1335 | 72.55 | ||||
| 66792 | ASM18726v1 assembly for Streptococcus equinus ATCC 9812 | scaffold | 525379 | 65.26 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptococcus equinus strain ATCC9812 16S ribosomal RNA gene, partial sequence | AF104116 | 356 | 525379 | ||
| 20218 | Streptococcus equinus NCDO1037T 16S ribosomal RNA gene, complete sequence | AF429765 | 1463 | 525379 | ||
| 20218 | Streptococcus equinus 16S rRNA gene, strain ATCC 9812 | AJ301607 | 1433 | 525379 | ||
| 20218 | Streptococcus equinus strain ATCC 9812 16S-23S ribosomal RNA intergenic spacer, complete sequence | AY347547 | 284 | 525379 | ||
| 20218 | Streptococcus equinus gene for 16S rRNA, partial sequence, strain: NBRC 12553 | AB680295 | 1467 | 1335 | ||
| 20218 | S.equinus 16S rRNA | X58318 | 1334 | 1335 | ||
| 67770 | Streptococcus equinus gene for 16S ribosomal RNA, partial sequence, strain: JCM 7879 | LC096208 | 1498 | 1335 | ||
| 124043 | Streptococcus equinus ATCC 9812 16S ribosomal RNA gene, partial sequence. | MN326686 | 1343 | 525379 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 95.10 | no |
| 125439 | motility | BacteriaNetⓘ | no | 65.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 72.10 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.40 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 83.74 | yes |
| 125438 | aerobic | aerobicⓘ | no | 97.71 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 85.57 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.00 | no |
| 125438 | flagellated | motile2+ⓘ | no | 87.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Clear distinction between Burkholderia mallei and Burkholderia pseudomallei using fluorescent motB primers. | Schmoock G, Elschner M, Sprague LD. | Acta Vet Scand | 10.1186/s13028-015-0104-4 | 2015 | |
| Enzymology | DNA microarray-based detection of Coxiella burnetii, the causative agent of Q fever. | Schmoock G, Ehricht R, Sprague LD. | Acta Vet Scand | 10.1186/1751-0147-56-27 | 2014 | |
| Phylogeny | Description and evaluation of the semiautomated 4-hour rapid ID 32 Strep method for identification of streptococci and members of related genera. | Freney J, Bland S, Etienne J, Desmonceaux M, Boeufgras JM, Fleurette J. | J Clin Microbiol | 10.1128/jcm.30.10.2657-2661.1992 | 1992 | |
| Comparative Evaluation of Current Biochemical-, Sequencing-, and Proteomic-Based Identification Methods for the Streptococcus bovis Group. | Putnam NE, Youn JH, Wallace MA, Luethy PM, Burnham CD, Butler-Wu S, Dekker JP, Lau AF. | J Clin Microbiol | 10.1128/jcm.01712-22 | 2023 | ||
| Characterization of two lytic bacteriophages, infecting Streptococcus bovis/equinus complex (SBSEC) from Korean ruminant. | Park SY, Kwon H, Kim SG, Park SC, Kim JH, Seo S. | Sci Rep | 10.1038/s41598-023-36306-x | 2023 | ||
| Exploring and engineering PAM-diverse Streptococci Cas9 for PAM-directed bifunctional and titratable gene control in bacteria. | Wang J, Teng Y, Gong X, Zhang J, Wu Y, Lou L, Li M, Xie ZR, Yan Y. | Metab Eng | 10.1016/j.ymben.2022.10.005 | 2023 | ||
| Factors Associated With MALDI-TOF Mass Spectral Quality of Species Identification in Clinical Routine Diagnostics. | Cuenod A, Foucault F, Pfluger V, Egli A. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.646648 | 2021 | ||
| Pathogenicity | Exploring the Potential of Novel Animal-Origin Probiotics as Key Players in One Health: Opportunities and Challenges. | Gorzelanna Z, Mamrot A, Bedkowska D, Bubak J, Miszczak M. | Int J Mol Sci | 10.3390/ijms26115143 | 2025 | |
| Comparative genome analysis of Streptococcus infantarius subsp. infantarius CJ18, an African fermented camel milk isolate with adaptations to dairy environment. | Jans C, Follador R, Hochstrasser M, Lacroix C, Meile L, Stevens MJ. | BMC Genomics | 10.1186/1471-2164-14-200 | 2013 | ||
| Metabolism | Unravelling the Reduction Pathway as an Alternative Metabolic Route to Hydroxycinnamate Decarboxylation in Lactobacillus plantarum. | Santamaria L, Reveron I, Lopez de Felipe F, de Las Rivas B, Munoz R. | Appl Environ Microbiol | 10.1128/aem.01123-18 | 2018 | |
| Novel real-time PCR detection assay for Brucella suis. | Hansel C, Mertens K, Elschner MC, Melzer F. | Vet Rec Open | 10.1136/vetreco-2014-000084 | 2015 | ||
| Competence for natural genetic transformation in the Streptococcus bovis group streptococci S. infantarius and S. macedonicus. | Morrison DA, Guedon E, Renault P. | J Bacteriol | 10.1128/jb.00230-13 | 2013 | ||
| Enzymology | Rapid and reliable identification of Streptococcus pneumoniae isolates by pneumolysin-mediated agglutination. | Cima-Cabal MD, Vazquez F, de los Toyos JR, Mendez FJ. | J Clin Microbiol | 10.1128/jcm.37.6.1964-1966.1999 | 1999 | |
| Phylogeny | Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis. | Steelman SM, Chowdhary BP, Dowd S, Suchodolski J, Janecka JE. | BMC Vet Res | 10.1186/1746-6148-8-231 | 2012 | |
| Development of a DNA probe for Streptococcus bovis by using a cloned amylase gene. | Whitehead TR, Cotta MA. | J Clin Microbiol | 10.1128/jcm.31.9.2387-2391.1993 | 1993 | ||
| Phylogeny | Geno- and phenotypic diversity of avian isolates of Streptococcus gallolyticus subsp. gallolyticus (Streptococcus bovis) and associated diagnostic problems. | Chadfield MS, Christensen JP, Decostere A, Christensen H, Bisgaard M. | J Clin Microbiol | 10.1128/jcm.00922-06 | 2007 | |
| Genetics | Phylogenomic and MALDI-TOF MS analysis of Streptococcus sinensis HKU4T reveals a distinct phylogenetic clade in the genus Streptococcus. | Teng JL, Huang Y, Tse H, Chen JH, Tang Y, Lau SK, Woo PC. | Genome Biol Evol | 10.1093/gbe/evu232 | 2014 | |
| Pathogenicity | Comparative survival of antibiotic-resistant and -sensitive fecal indicator bacteria in estuarine water. | Pettibone GW, Sullivan SA, Shiaris MP. | Appl Environ Microbiol | 10.1128/aem.53.6.1241-1245.1987 | 1987 | |
| Phylogeny | 16S ribosomal DNA sequence analysis distinguishes biotypes of Streptococcus bovis: Streptococcus bovis Biotype II/2 is a separate genospecies and the predominant clinical isolate in adult males. | Clarridge JE, Attorri SM, Zhang Q, Bartell J. | J Clin Microbiol | 10.1128/jcm.39.4.1549-1552.2001 | 2001 | |
| Phylogeny | Characterization of ear fluid isolates of Alloiococcus otitidis from patients with recurrent otitis media. | Bosley GS, Whitney AM, Pruckler JM, Moss CW, Daneshvar M, Sih T, Talkington DF. | J Clin Microbiol | 10.1128/jcm.33.11.2876-2880.1995 | 1995 | |
| Enzymology | Extracellular transglucosylase and alpha-amylase of Streptococcus equinus. | Boyer EW, Hartman PA. | J Bacteriol | 10.1128/jb.106.2.561-570.1971 | 1971 | |
| Phylogeny | Phenotypic and phylogenetic characterization of ruminal tannin-tolerant bacteria. | Nelson KE, Thonney ML, Woolston TK, Zinder SH, Pell AN. | Appl Environ Microbiol | 10.1128/aem.64.10.3824-3830.1998 | 1998 | |
| Metabolism | Presumptive speciation of Streptococcus bovis and other group D streptococci from human sources by using arginine and pyruvate tests. | Gross KC, Houghton MP, Senterfit LB. | J Clin Microbiol | 10.1128/jcm.1.1.54-60.1975 | 1975 | |
| Phylogeny | Classification and identification of the viridans streptococci. | Coykendall AL. | Clin Microbiol Rev | 10.1128/cmr.2.3.315 | 1989 | |
| Genetics | Genome sequences of copper resistant and sensitive Enterococcus faecalis strains isolated from copper-fed pigs in Denmark. | Zhang S, Wang D, Wang Y, Hasman H, Aarestrup FM, Alwathnani HA, Zhu YG, Rensing C. | Stand Genomic Sci | 10.1186/s40793-015-0021-1 | 2015 | |
| Enzymology | Catalytic efficiency diversification of duplicate beta-1,3-1,4-glucanases from Neocallimastix patriciarum J11. | Hung YL, Chen HJ, Liu JC, Chen YC. | Appl Environ Microbiol | 10.1128/aem.07473-11 | 2012 | |
| Phylogeny | Identification of clinically relevant viridans streptococci by an oligonucleotide array. | Chen CC, Teng LJ, Kaiung S, Chang TC. | J Clin Microbiol | 10.1128/jcm.43.4.1515-1521.2005 | 2005 | |
| Enzymology | Molecular detection, quantification, and isolation of Streptococcus gallolyticus bacteria colonizing colorectal tumors: inflammation-driven potential of carcinogenesis via IL-1, COX-2, and IL-8. | Abdulamir AS, Hafidh RR, Bakar FA. | Mol Cancer | 10.1186/1476-4598-9-249 | 2010 | |
| Pathogenicity | Peptide nucleic acid-mediated competitive PCR clamping for detection of rifampin-resistant Mycobacterium tuberculosis. | Iwamoto T, Sonobe T. | Antimicrob Agents Chemother | 10.1128/aac.48.10.4023-4026.2004 | 2004 | |
| Genetics | Bacteriocin Producing Streptococcus agalactiae Strains Isolated from Bovine Mastitis in Brazil. | Vidal Amaral JR, Juca Ramos RT, Almeida Araujo F, Bentes Kato R, Figueira Aburjaile F, de Castro Soares S, Goes-Neto A, Matiuzzi da Costa M, Azevedo V, Brenig B, Soares de Oliveira S, Soares Rosado A. | Microorganisms | 10.3390/microorganisms10030588 | 2022 |
| #8908 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20558 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40428 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68381 | Automatically annotated from API rID32STR . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119122 | Collection of Institut Pasteur ; Curators of the CIP; CIP 102504 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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