Name: Geobacillus subterraneus subsp. subterraneus 34
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1447

Type strain:

Species: Geobacillus subterraneus subsp. subterraneus

Strain Designation: 34, R-35641

Culture col. no.: DSM 13552, AS 12673, VKM B-2226, CCUG 55420

Strain history: <- T.N. Nazina; 34

NCBI tax ID(s): 129338 (species), 1690415 (subspecies)

SI-ID 49487

DSM 13552, VKM B-2226, LMG 23035, CCM 7225, KCTC 3922, KACC 11369, NCIMB 13892, BCRC 17565, CCRC 17565, CCUG 55420

Special Collections

DSMZ
CCUG

Section

When using BacDive for research please cite our paper

Geobacillus subterraneus subsp. subterraneus 34 is an aerobe, thermophilic bacterium that was isolated from formation water of the Liaohe oil field.

aerobe
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Geobacillus*
	Species	**Geobacillus subterraneus subsp. subterraneus**
	Full Scientific Name (LPSN)	Geobacillus subterraneus subsp. subterraneus (Nazina et al. 2001) Poli et al. 2013

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5084]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5084]

Culture medium growth

[Ref.: #5084]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5084]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5084]			growth	55 °C
[Ref.: #60580]			growth	56 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #60580]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5084]	Sample type/isolated from	formation water of the Liaohe oil field
[Ref.: #5084]	Geographic location (country and/or sea, region)	Liaoring province
[Ref.: #5084]	Country	China
[Ref.: #5084]	Country ISO 3 Code	CHN
[Ref.: #5084]	Continent	Asia

[Ref.: #60580]	Sample type/isolated from	Formation water
[Ref.: #60580]	Geographic location (country and/or sea, region)	Liaoring province,Liaohe oil field
[Ref.: #60580]	Country	China
[Ref.: #60580]	Country ISO 3 Code	CHN
[Ref.: #60580]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Oil reservoir
#Environmental	#Aquatic	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN428689 (>99% sequence identity) for Geobacillus from Microbeatlas

Aquatic Samples	1277
Soil Samples	2618
Animal Samples	3638
Plant Samples	757
Total Samples	8290

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5084]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5084]	Geobacillus subterraneus partial 16S rRNA gene, strain R-35641	FN428689	1510	GenBank ENA	129338 tax ID
[Ref.: #20218]	Geobacillus subterraneus strain DSM 13552 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, partial sequence; and tRNA-Ala gene, complete sequence	EU157950	293	GenBank ENA	129338 tax ID	*
[Ref.: #20218]	Geobacillus subterraneus isolate Gs2 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723634	897	GenBank ENA	129338 tax ID	*
[Ref.: #20218]	Geobacillus subterraneus isolate Gs5 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723635	623	GenBank ENA	129338 tax ID	*
[Ref.: #20218]	Geobacillus subterraneus isolate Gs10 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723636	787	GenBank ENA	129338 tax ID	*

[Ref.: #5084]

GC-content

52.3 mol%

Availability in culture collections External links

[Ref.: #5084]

Culture collection no.

DSM 13552, AS 12673, VKM B-2226, CCUG 55420

[Ref.: #71097]

SI-ID 49487

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Functional expression of a novel methanol-stable esterase from Geobacillus subterraneus DSM13552 for biocatalytic synthesis of cinnamyl acetate in a solvent-free system.	Cai X, Lin L, Shen Y, Wei W, Wei DZ	BMC Biotechnol	10.1186/s12896-020-00622-1	2020	*

References

#5084

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13552

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#60580 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55420

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71097

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49487.1 )

* These data were automatically processed and therefore are not curated

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