Name: Zymomonas mobilis subsp. francensis AN0101
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14290

Type strain:

Species: Zymomonas mobilis subsp. francensis

Strain Designation: AN0101

Culture col. no.: DSM 18599, CIP 108684, LMG 22974

Strain history: CIP <- 2005, M. Coton, ADRIA Normandie, Villers Bocage, France: strain AN0101

NCBI tax ID(s): 325472 (subspecies)

SI-ID 356289

CIP 108684, DSM 18599

Special Collections

DSMZ
CIP

Section

Zymomonas mobilis subsp. francensis AN0101 is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from "framboise" spoiled ciders.

Gram-negative
rod-shaped
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Zymomonadaceae*
	Genus	*Zymomonas*
	Species	**Zymomonas mobilis subsp. francensis**
	Full Scientific Name (LPSN)	Zymomonas mobilis subsp. francensis Coton et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #120990]	Gram stain	negative

[Ref.: #120990]	Cell shape	rod-shaped

[Ref.: #120990]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7602]

Culture medium

ZYMOMONAS MEDIUM (DSMZ Medium 10)

[Ref.: #7602]

Culture medium growth

[Ref.: #7602]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7602]

Culture medium composition

expand / minimize

[Ref.: #33989]

Culture medium

MEDIUM 77 - for Zymomonas mobilis

[Ref.: #33989]

Culture medium growth

[Ref.: #33989]

Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #7602]		growth	28 °C
[Ref.: #33989]		growth	30 °C
[Ref.: #120990]		growth	15-30 °C
[Ref.: #120990]	no	growth	10 °C
[Ref.: #120990]	no	growth	37 °C
[Ref.: #120990]	no	growth	41 °C
[Ref.: #120990]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7602]

Oxygen tolerance

anaerobe

	Salt	Tested relation		Salt conc.
[Ref.: #120990]	NaCl		growth	0-2	%
[Ref.: #120990]	NaCl	no	growth	4	%
[Ref.: #120990]	NaCl	no	growth	6	%
[Ref.: #120990]	NaCl	no	growth	8	%
[Ref.: #120990]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #120990]	citrate ChEBI	-	carbon source
[Ref.: #120990]	esculin ChEBI	-	hydrolysis
[Ref.: #120990]	hippurate ChEBI	+	hydrolysis
[Ref.: #120990]	nitrate ChEBI	-	reduction
[Ref.: #120990]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #120990]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #120990]		acetoin ChEBI	-
[Ref.: #120990]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120990]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120990]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120990]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #120990]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120990]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120990]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120990]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120990]	oxidase	-
[Ref.: #120990]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120990]	tryptophan deaminase	-
[Ref.: #120990]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120990]	11386	-	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7602]	Sample type/isolated from	"framboise" spoiled ciders
[Ref.: #7602]	Geographic location (country and/or sea, region)	Basse Normandie
[Ref.: #7602]	Country	France
[Ref.: #7602]	Country ISO 3 Code	FRA
[Ref.: #7602]	Continent	Europe

[Ref.: #120990]	Sample type/isolated from	French 'framboisé' spoiled ciders
[Ref.: #120990]	Geographic location (country and/or sea, region)	Basse Normandie
[Ref.: #120990]	Country	France
[Ref.: #120990]	Country ISO 3 Code	FRA
[Ref.: #120990]	Continent	Europe
[Ref.: #120990]	Isolation date	2001
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Fermented
#Environmental	#Microbial community	-
#Engineered	#Food production	#Beverage

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7602]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120990]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Zymomonas mobilis subsp. francensis strain AN0101 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	AY940086	672	GenBank ENA	325472 tax ID	*
[Ref.: #20218]	Zymomonas mobilis subsp. francensis partial 16S rRNA gene, type strain DSM 18599T	FR749909	2952	GenBank ENA	325472 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Zymomonas mobilis AN0101	GCA_006715975	contig	GenBank ENA	542 tax ID	*
[Ref.: #66792]	Zymomonas mobilis francensis DSM 18599	2811994955	draft	JGI IMG/M	542 tax ID	*

Availability in culture collections External links

[Ref.: #7602]

Culture collection no.

DSM 18599, CIP 108684, LMG 22974

[Ref.: #83443]

SI-ID 356289

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Polyphasic study of Zymomonas mobilis strains revealing the existence of a novel subspecies Z. mobilis subsp. francensis subsp. nov., isolated from French cider.	Coton M, Laplace JM, Auffray Y, Coton E	Int J Syst Evol Microbiol	10.1099/ijs.0.63732-0	2006	*

References

#7602

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18599

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33989 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#83443

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID356289.1 )

#120990 Collection of Institut Pasteur ; Curators of the CIP; CIP 108684
* These data were automatically processed and therefore are not curated

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